EY650170
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_THISH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=ispF PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 7.826e-38 Identity = 72/153 (47.06%), Postives = 104/153 (67.97%), Query Frame = 2 Query: 335 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILL 793 R+GHG+D+H + G +++GG+ +PH + AHSDGDVL+H + DA+LGA L DIG+ FPD+DP +KGA S V ++ V L+ E GY +GN+DAT+I Q PK++P+ E +R NL++ L VN+KA T E+ G + IAAH V L+ Sbjct: 5 RIGHGYDVHAFKAGGHVVLGGVRIPHAKAFAAHSDGDVLIHALCDALLGAAALGDIGRHFPDTDPAYKGADSRVLLRRVVELLHEQGYRVGNVDATIIAQAPKMAPHIEAMRANLADDLGVALECVNVKATTTERLGFAGREEGIAAHAVALI 157
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_RALPJ (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Ralstonia pickettii (strain 12J) GN=ispF PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 7.826e-38 Identity = 75/158 (47.47%), Postives = 106/158 (67.09%), Query Frame = 2 Query: 326 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMK 799 + R+G G+D+H L G LI+GG+ +PH RG HSD D LLH + DA+ GA GL DIG+ FPD+DP + GA S V ++EAVR + +AGY +GN+DAT+I Q+PKL+P+ + NL+E L P N+KAKT+EK G++ I A V+L+ + Sbjct: 4 MDIRIGQGYDVHALVEGRKLILGGVEIPHTRGLLGHSDADALLHAITDALFGAAGLGDIGRHFPDTDPAFAGADSRVLLREAVRRVHKAGYAVGNVDATVIAQKPKLAPHVPGMVANLAEDLGIAPERCNVKAKTNEKLGFEGKEEGIVAQAVVLIYR 161
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_RALEJ (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Ralstonia eutropha (strain JMP134) GN=ispF PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 7.826e-38 Identity = 78/165 (47.27%), Postives = 111/165 (67.27%), Query Frame = 2 Query: 326 LPF--RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMKK*IND 814 +PF RVG G+D+H L PG LI+GG+++PH+RG HSD D LLH + DA+ GA GL DIG+ FPD+D ++ GA S V ++EA R + EAGYEIGN+DA++I Q+PKL+P+ + N+++ L T N+KAKT+EK G + I A +L+ + I D Sbjct: 2 MPFDIRVGQGYDVHALVPGRKLILGGVHIPHDRGLLGHSDADALLHAITDALFGAAGLGDIGRHFPDTDAQFAGADSRVLLREAARRVREAGYEIGNVDASVIAQQPKLAPHIPGMVANIADDLGLPATRCNVKAKTNEKLGFEGRQEGIVAQAAVLIWRGAIAD 166
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_PSEPW (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Pseudomonas putida (strain W619) GN=ispF PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 7.826e-38 Identity = 74/154 (48.05%), Postives = 107/154 (69.48%), Query Frame = 2 Query: 335 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLM 796 R+GHG+D+HR G + +GG+ +PH+ G AHSDGDVLLH + DA+LGA GL DIG+ FPD+DP++KGA S V ++ V ++ G+++GN+DAT++ Q PK+SP+ ET+R ++E L + VN+KA T EK G + IA H V LL+ Sbjct: 2 RIGHGYDVHRFCDGDFITLGGVRIPHKYGLLAHSDGDVLLHALSDALLGAAGLGDIGKHFPDTDPQFKGADSRVLLRHVVGIVQAKGWKVGNVDATIVAQAPKMSPHIETMRQRIAEDLQVELDQVNVKATTTEKLGFTGREEGIAVHAVALLL 155
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_BORA1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bordetella avium (strain 197N) GN=ispF PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 1.022e-37 Identity = 79/159 (49.69%), Postives = 106/159 (66.67%), Query Frame = 2 Query: 326 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMKK 802 +PFRVG GFD+H L G PLIIGG+ + H G HSD DVLLH V DAILGA GL DIG+ FPD+DP++KGA S V ++EA+ +D AG+++ N+DAT+ Q PK+ P+ + N++ L +VN+KAKT+E G K IAA V LL ++ Sbjct: 3 IPFRVGQGFDVHALVTGRPLIIGGVRIEHSHGLLGHSDADVLLHAVTDAILGAAGLGDIGRHFPDTDPRFKGADSRVLLREAMARVDAAGWQVVNVDATVHAQAPKIGPHAPAMVANIAADLGIAHDLVNIKAKTNEGLGYLGRKEGIAATVVTLLARQ 161
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_BACLD (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=ispF PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 1.022e-37 Identity = 76/156 (48.72%), Postives = 105/156 (67.31%), Query Frame = 2 Query: 332 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMK 799 FR+G GFD+H+L G PLIIGGI +P+E+G HSD DVLLH + DA LGA+G DIG+ FPD+DP++K A S ++ ++ E GY +GNLD T+I Q+PK++PY E +R ++E L A+ + +N+KA T EK G IAA +LL K Sbjct: 2 FRIGQGFDVHQLVEGRPLIIGGITIPYEKGLLGHSDADVLLHTIADACLGAVGEGDIGKHFPDTDPEFKDADSFKLLRHVWMIVKEKGYTLGNLDCTIIAQKPKMAPYIEDMRARIAEGLEAEISQINVKATTTEKLGFTGRAEGIAAQASVLLQK 157
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_SHESH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Shewanella sediminis (strain HAW-EB3) GN=ispF PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.335e-37 Identity = 75/155 (48.39%), Postives = 104/155 (67.10%), Query Frame = 2 Query: 335 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMK 799 R+GHGFD+H+ G PL++GG+++P+E G AHSDGDV+LH + DA+LGA+ L DIG+ FPD+D ++KGA S ++ RL E GY +GNLD T+I Q PK++P+ E IR L+ D +N+KA T EK G K IA V+LL+K Sbjct: 4 RIGHGFDVHKFGGGSPLLLGGVHIPYETGLIAHSDGDVVLHAISDAVLGAVALGDIGKHFPDTDEEFKGADSRHLLRHCYRLAKEKGYSMGNLDVTIIAQAPKMAPHIEAIREVLALDFETDTDNINVKATTTEKLGFTGRKEGIAVEAVVLLVK 158
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_SHEPA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=ispF PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.335e-37 Identity = 77/158 (48.73%), Postives = 106/158 (67.09%), Query Frame = 2 Query: 326 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMK 799 + R+GHGFD+H+ PLI+GGI VP+E G AHSDGDV+LH + DAILGA+ L DIG+ FPD+DP +KGA S V ++ +L + GY + NLD T+I Q PK++P+ E IR L+E L ++ +N+KA T EK G K IA V+L++K Sbjct: 1 MKIRIGHGFDVHKFGGEPPLILGGITVPYEVGLIAHSDGDVVLHAISDAILGAMALGDIGKHFPDTDPDFKGADSRVLLRHCYKLAMDMGYSLSNLDVTVIAQAPKMAPHIEAIRAVLAEDLASEICDINVKATTTEKLGFTGRKEGIAVEAVVLMIK 158
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_PELCD (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=ispF PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.335e-37 Identity = 75/155 (48.39%), Postives = 104/155 (67.10%), Query Frame = 2 Query: 335 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMK 799 R+GHG+D+H+L LI+GG+++PH G HSD DVLLH + DAILGALG DIG+ FPD+DP +KG S + E +RL + GY +GNLDAT+I QRPKL+P+ +R N++E D + +N+KA T E+ G I++H V+LL K Sbjct: 3 RIGHGYDVHQLVAERKLILGGVDIPHTLGLLGHSDADVLLHAICDAILGALGEGDIGKHFPDTDPAYKGISSIKLLHEVMRLAETKGYRLGNLDATIIAQRPKLAPFIGNMRENIAEACGTDVSRINVKATTTEQLGFEGRGEGISSHAVVLLNK 157
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_ERWCT (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Erwinia carotovora subsp. atroseptica GN=ispF PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.335e-37 Identity = 76/156 (48.72%), Postives = 106/156 (67.95%), Query Frame = 2 Query: 335 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMKK 802 R+GHGFD+H+ PL+IGG+ +P+ +G AHSDGDV+LH V DA+LGA L DIG++FPD+DP +KGA S ++EA R +++ GY++GNLD T+I Q PK++P+ +R NL+E L VN+KA T E+ G IA V LL+KK Sbjct: 2 RIGHGFDVHKFGGEGPLVIGGVRIPYTQGLLAHSDGDVVLHAVTDALLGAAALGDIGKLFPDTDPAFKGADSRGLLREAWRRINDKGYQLGNLDVTIIAQAPKMAPHIPQMRVNLAEDLQCHMDDVNVKATTTEQLGFTGRGEGIACEAVALLVKK 157 The following BLAST results are available for this feature:
BLAST of EY650170 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY650170 ID=EY650170; Name=EY650170; organism=Citrus sinensis; type=EST; length=957bpback to top |