EY650170
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_SHEHH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Shewanella halifaxensis (strain HAW-EB4) GN=ispF PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.743e-37 Identity = 76/158 (48.10%), Postives = 106/158 (67.09%), Query Frame = 2 Query: 326 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMK 799 + R+GHGFD+H+ PLI+GG++VP+E G AHSDGDV LH + DAILGA+ L DIG+ FPD+DP++KGA S V ++ +L + G+ + NLD T+I Q PK++P+ E IR L+ L AD +N+KA T EK G K IA V+L++K Sbjct: 1 MKIRIGHGFDVHKFGGEPPLILGGVDVPYEVGLIAHSDGDVALHAISDAILGAMALGDIGKHFPDTDPEFKGADSRVLLRHCYQLATDMGFSLSNLDVTIIAQAPKMAPHIEAIRKVLAADLVADINDINVKATTTEKLGFTGRKEGIAVEAVVLMIK 158
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_RALEH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=ispF PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.743e-37 Identity = 80/165 (48.48%), Postives = 107/165 (64.85%), Query Frame = 2 Query: 326 LPF--RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMKK*IND 814 +PF RVG G+D+H L PG LI+GG+ +PH+RG HSD D LLH V DA+ GA L DIG+ FPD+D ++ GA S V ++EA R + EAGYEIGN+DAT+I Q PKL+P+ + NL+E L N+KAKT+EK G + I A +LL + + D Sbjct: 2 MPFDIRVGQGYDVHALVPGRKLILGGVEIPHDRGLLGHSDADALLHAVTDALFGAAALGDIGRHFPDTDAQFAGADSRVLLREAARRVREAGYEIGNVDATVIAQAPKLAPHIGAMVANLAEDLGIARGRCNVKAKTNEKLGFEGRQEGIVAQAAVLLWRASVGD 166
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_PSEAB (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=ispF PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 2.277e-37 Identity = 72/156 (46.15%), Postives = 107/156 (68.59%), Query Frame = 2 Query: 335 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMKK 802 R+GHG+D+HR G + +GG+ +PH+ G AHSDGDVLLH + DA+LGA L DIG+ FPD+DP++KGA S ++ V ++ E G+++GN+DAT++ Q PK++P+ ET+R +++E L VN+KA T E+ G + IA H V LLM + Sbjct: 2 RIGHGYDVHRFGEGDFITLGGVRIPHKHGLVAHSDGDVLLHALSDALLGAAALGDIGKHFPDTDPRFKGADSRALLRHVVAIVAEKGWKVGNVDATIVAQAPKMAPHIETMRGSIAEDLGVAVDQVNVKATTTERLGFTGREEGIAVHAVALLMAR 157
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_GEOKA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Geobacillus kaustophilus GN=ispF PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 2.277e-37 Identity = 77/156 (49.36%), Postives = 103/156 (66.03%), Query Frame = 2 Query: 332 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMK 799 FR+G GFD+H+L G PLIIGG+ +P+E+G HSD DVLLH V DA LGA+G DIG+ FPD+DP++K A S+ + L + GY + N D T+I Q+PKL+PY E +R ++ LL A+ + VN+KA T EK G IAA V+LL K Sbjct: 2 FRIGQGFDVHQLVEGRPLIIGGVTIPYEKGLLGHSDADVLLHAVADACLGAIGAGDIGRHFPDTDPRFKDADSAELLAHVWALARQEGYRLVNADCTIIAQKPKLAPYIEEMRAVIARLLEAERSQVNVKATTTEKLGFTGRGEGIAAQAVVLLQK 157
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_VIBVY (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Vibrio vulnificus (strain YJ016) GN=ispF PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.974e-37 Identity = 74/156 (47.44%), Postives = 104/156 (66.67%), Query Frame = 2 Query: 335 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMKK 802 R+GHGFD+H+ P+IIGG+ VP+E+G AHSDGDV LH + DA+LGA+ DIG+ FPD+D KWKGA S +K+ R + E GY++GN D T+I Q PK++PY + +R ++ L D +N+KA T E+ G K IA V+LL+K+ Sbjct: 3 RIGHGFDVHKFGGEGPVIIGGVAVPYEQGLIAHSDGDVALHALSDALLGAIAAGDIGRHFPDTDDKWKGADSRELLKDVYRRVKEQGYKLGNADVTIIAQAPKMAPYIDAMREAIAHDLETDIRNINVKATTTERLGFTGRKEGIATEAVVLLIKQ 158
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_PROM2 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Prochlorococcus marinus (strain MIT 9215) GN=ispF PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.974e-37 Identity = 73/159 (45.91%), Postives = 107/159 (67.30%), Query Frame = 2 Query: 332 FRVGHGFDLHRLEPGYPLIIGGI--NVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMKK 802 FR+G+G+D+HRLE G LIIGG+ N P G + HSD DVL H ++DA+LGAL L DIG+ FP SD KWK S + + + + L+ + G+EI N+D+ ++ +RPK+ PY E ++ NLS+ L D + + +KA T+EK G + I+ H+V+LL KK Sbjct: 8 FRIGNGYDIHRLEIGRKLIIGGVKLNHPDNLGLDGHSDADVLSHSIMDALLGALSLGDIGKYFPPSDEKWKDVDSLILLSKVIDLVRKQGWEINNIDSVIVAERPKIKPYVEIMKRNLSKTLKIDDSFIGIKATTNEKLGPEGREEGISCHSVVLLEKK 166
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_SHELP (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=ispF PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 3.884e-37 Identity = 75/153 (49.02%), Postives = 102/153 (66.67%), Query Frame = 2 Query: 335 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILL 793 R+GHGFD+H+ PLI+GG+ VP++ G AHSDGDV+LH + DAILGA+ L DIG+ FPD+DP +KGA S V ++ +L + GY +GNLD T+I Q PK+ P+ + IR LS L +D +N+KA T EK G K IA V+L+ Sbjct: 4 RIGHGFDVHKFGGELPLILGGVEVPYDTGLVAHSDGDVVLHAISDAILGAMALGDIGKHFPDTDPDFKGADSRVLLRHCYQLALDKGYRLGNLDVTIIAQAPKMLPHIQAIRECLSADLESDIEAINVKATTTEKLGFTGRKEGIAVEAVVLM 156
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_RALSO (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Ralstonia solanacearum GN=ispF PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 3.884e-37 Identity = 74/158 (46.84%), Postives = 104/158 (65.82%), Query Frame = 2 Query: 326 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMK 799 + R+G G+D+H L G LI+GG+ +PH RG HSD D LLH + DA+ GA GL DIG+ FPD+DP + GA S V ++EAVR + EAGY++GN+DAT+I Q+PKL+P+ + NL+ L P N+KAKT+EK G + I A +L+ + Sbjct: 4 MDIRIGQGYDVHALVEGRKLILGGVEIPHTRGLLGHSDADALLHAITDALFGAAGLGDIGRHFPDTDPAFAGADSRVLLREAVRRVREAGYDVGNVDATVIAQKPKLAPHVPGMVANLAADLGIAPGRCNVKAKTNEKLGFEGREDGIVAQAAVLIYR 161
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_PSEE4 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Pseudomonas entomophila (strain L48) GN=ispF PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 3.884e-37 Identity = 72/154 (46.75%), Postives = 106/154 (68.83%), Query Frame = 2 Query: 335 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLM 796 R+GHG+D+HR G + +GG+ +PH+ G AHSDGDVLLH + DA+LGA L DIG+ FPD+DP++KGA S V ++ V ++D G+++GN+DAT++ Q PK++P+ ET+R ++ L + VN+KA T EK G + IA H V LL+ Sbjct: 2 RIGHGYDVHRFCDGDFITLGGVRIPHKYGLLAHSDGDVLLHALSDALLGAAALGDIGKHFPDTDPQFKGADSRVLLRHVVGIVDNKGWKVGNVDATIVAQAPKMAPHIETMRQQIAADLQVELDQVNVKATTEEKLGFTGREEGIAVHAVALLL 155
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_PORG3 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=ispF PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 3.884e-37 Identity = 71/156 (45.51%), Postives = 106/156 (67.95%), Query Frame = 2 Query: 329 PFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLM 796 PFR+G GFD+HRL GYPL +GG+ + H +G E HSD DVL+H + DA+LGA L DIG FP SDP++KG S + + A+ L+ GYE+GN+DAT+ ++PKL+P+ ++ L+E++ + + ++LKA T EK G + I+A+ V LL+ Sbjct: 4 PFRIGFGFDVHRLSEGYPLWMGGVRLEHSKGLEGHSDADVLIHAICDALLGAAALRDIGYHFPPSDPQYKGIDSKILLARAMELVRSQGYELGNIDATIAAEQPKLNPHIPDMQRVLAEVIQVEVSDISLKATTTEKLGFTGREEGISAYAVALLI 159 The following BLAST results are available for this feature:
BLAST of EY650170 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY650170 ID=EY650170; Name=EY650170; organism=Citrus sinensis; type=EST; length=957bpback to top |