EY650170

Overview
NameEY650170
Unique NameEY650170
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length957
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_PORGI (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Porphyromonas gingivalis GN=ispF PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.130e-36
Identity = 70/156 (44.87%), Postives = 105/156 (67.31%), Query Frame = 2
Query:  329 PFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLM 796
            PFR+G GFD+HRL  GYPL +GG+ + H +G E HSD DVL+H + DA+LGA  L DIG  FP SDP++KG  S + +   + L+   GYE+GN+DAT+  ++PKL+P+   ++  L+E++  + + ++LKA T EK    G +  I+A+ V LL+
Sbjct:    4 PFRIGFGFDVHRLSEGYPLWMGGVRLEHSKGLEGHSDADVLIHAICDALLGAAALRDIGYHFPPSDPQYKGIDSKILLARVMELVRSQGYELGNIDATIAAEQPKLNPHIPDMQRVLAEVIQVEVSDISLKATTTEKLGFTGREEGISAYAVALLI 159          
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_PHOLL (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Photorhabdus luminescens subsp. laumondii GN=ispF PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.130e-36
Identity = 76/156 (48.72%), Postives = 101/156 (64.74%), Query Frame = 2
Query:  335 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMKK 802
            R+GHGFD+H+     P+IIGG+ +P+E+G  AHSDGDV LH   DA+LGA  L DIG++FPD+DP +KG  S   ++EA   + E GY IGNLD T+I Q PK+ P+   +R NL+E L      +N+KA T EK    G K  IA   V LL+K+
Sbjct:    2 RIGHGFDVHKFGGEGPIIIGGVRIPYEQGLLAHSDGDVALHAATDALLGAAALGDIGKLFPDTDPAFKGVDSRKLLREAYSRIREKGYRIGNLDITIIAQAPKMLPHIPQMRVNLAEDLQCHIDDINVKATTTEKLGFVGRKEGIACEAVALLVKE 157          
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_GEOTN (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=ispF PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.130e-36
Identity = 73/156 (46.79%), Postives = 105/156 (67.31%), Query Frame = 2
Query:  332 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMK 799
            FR+G GFD+H+   G PLIIGG+++P+E+G   HSD DVLLH V DA LGA+G  DIG+ FPD+DP++K A S+  +     L+ + GY + N D T+I Q+PK++PY E ++  ++ LL A+ + VN+KA T EK    G +  +AA  V+LL K
Sbjct:    2 FRIGQGFDVHQFVEGRPLIIGGVHIPYEKGLLGHSDADVLLHAVADACLGAIGAGDIGRHFPDTDPRYKDADSAELLAHVWSLVRQEGYVLVNADCTIIAQKPKMAPYIEEMKKVIARLLEAERSQVNVKATTTEKLGFTGREEGVAAQVVVLLQK 157          
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_BACSK (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus clausii (strain KSM-K16) GN=ispF PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.130e-36
Identity = 73/155 (47.10%), Postives = 104/155 (67.10%), Query Frame = 2
Query:  335 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMK 799
            R+G GFD+H+L  G PL++GG+++PH +G   HSD DVLLH + DA LGA+G  D+G+ FPD+D  +K A S   + +A +L+  AGY +GN+D T++ Q+PKL+PY E +R  ++ELL  D   V++KA T E     G +  IAA  VILL K
Sbjct:    3 RIGQGFDVHQLTEGRPLLLGGVHIPHPKGLLGHSDADVLLHTITDAALGAIGAGDLGKHFPDTDEAFKDADSKHLLSQAWQLVKNAGYTLGNVDCTVMAQKPKLAPYIEAMRKQIAELLETDVANVSVKATTTETLGFVGREEGIAAQAVILLQK 157          
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_PELPD (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Pelobacter propionicus (strain DSM 2379) GN=ispF PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.476e-36
Identity = 74/156 (47.44%), Postives = 104/156 (66.67%), Query Frame = 2
Query:  335 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMKK 802
            R+GHG+D+H+L  G  LI+GG+++P E+G   HSD DVLLH + DAILGALG  DIG+ FPD+DP +KGA S   ++    L    GY +GNLDAT+I QRPK++P+   +R N++ +L +    VN+KA T E     G    I+AH V+L++ K
Sbjct:    2 RIGHGYDVHKLVEGRKLIMGGVDIPWEKGLLGHSDADVLLHAIADAILGALGEGDIGKHFPDTDPAYKGADSLKLLEHVANLAIAKGYCLGNLDATIIAQRPKMAPHIPAMRENIARVLRSTVDRVNVKATTEEGLSFTGRGEGISAHAVVLMIGK 157          
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_CLOD6 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Clostridium difficile (strain 630) GN=ispF PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.476e-36
Identity = 70/154 (45.45%), Postives = 107/154 (69.48%), Query Frame = 2
Query:  335 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLM 796
            R+G G+D+H+L     LIIGG+ +PH++G   HSD DVL+H ++D+ILGAL L DIG+ FPD+D ++KGA S   ++    L+   GY+IGN+D+T+I Q PK++PY E++R+N+S++L  D   +N+KA T E     G K  IA+ ++ LL+
Sbjct:    2 RIGLGYDVHKLTEDRKLIIGGVEIPHDKGLLGHSDADVLIHAIMDSILGALALGDIGKHFPDTDEEYKGADSMKLLEHVYNLITSKGYKIGNIDSTIIAQSPKMAPYIESMRSNISKVLNTDIDNINIKATTEEGLGFTGAKQGIASQSICLLL 155          
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_VIBCM (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=ispF PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.928e-36
Identity = 74/155 (47.74%), Postives = 100/155 (64.52%), Query Frame = 2
Query:  335 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMK 799
            R+GHGFD+HR     P+IIGG+ +P+E+G  AHSDGDV LH + DA+LGA+   DIG+ FPD+D KWKGA S   +K+  R +   GY +GN D T+I Q PK++PY + +   ++E L  D   +N+KA T EK    G K  IA   V+LL K
Sbjct:    3 RIGHGFDVHRFGGEGPIIIGGVKIPYEQGLIAHSDGDVALHALSDALLGAIAAGDIGRHFPDTDDKWKGADSRELLKDVYRRVKAQGYVLGNADVTIIAQAPKMAPYIQAMCAAIAEDLETDLGNINVKATTTEKLGFTGRKEGIACEAVVLLRK 157          
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_VIBCH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Vibrio cholerae GN=ispF PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.928e-36
Identity = 74/155 (47.74%), Postives = 100/155 (64.52%), Query Frame = 2
Query:  335 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMK 799
            R+GHGFD+HR     P+IIGG+ +P+E+G  AHSDGDV LH + DA+LGA+   DIG+ FPD+D KWKGA S   +K+  R +   GY +GN D T+I Q PK++PY + +   ++E L  D   +N+KA T EK    G K  IA   V+LL K
Sbjct:    3 RIGHGFDVHRFGGEGPIIIGGVKIPYEQGLIAHSDGDVALHALSDALLGAIAAGDIGRHFPDTDDKWKGADSRELLKDVYRRVKAQGYVLGNADVTIIAQAPKMAPYIQAMCAAIAEDLETDLGNINVKATTTEKLGFTGRKEGIACEAVVLLRK 157          
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_VIBC3 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=ispF PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.928e-36
Identity = 74/155 (47.74%), Postives = 100/155 (64.52%), Query Frame = 2
Query:  335 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMK 799
            R+GHGFD+HR     P+IIGG+ +P+E+G  AHSDGDV LH + DA+LGA+   DIG+ FPD+D KWKGA S   +K+  R +   GY +GN D T+I Q PK++PY + +   ++E L  D   +N+KA T EK    G K  IA   V+LL K
Sbjct:    3 RIGHGFDVHRFGGEGPIIIGGVKIPYEQGLIAHSDGDVALHALSDALLGAIAAGDIGRHFPDTDDKWKGADSRELLKDVYRRVKAQGYVLGNADVTIIAQAPKMAPYIQAMCAAIAEDLETDLGNINVKATTTEKLGFTGRKEGIACEAVVLLRK 157          
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_THEEB (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Thermosynechococcus elongatus (strain BP-1) GN=ispF PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.928e-36
Identity = 72/156 (46.15%), Postives = 101/156 (64.74%), Query Frame = 2
Query:  326 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILL 793
            +  R+G+G+D+HRL P  PLI+GGI + H  G   HSD DVL H ++DA+LGAL L DIG  FP SDP+W GA S V + +   L+ E G+ +GN+DA ++ +RPKL PY + +R  L+  L  D   +++KA T+EK    G +  IAA+ V LL
Sbjct:    2 MKIRIGNGYDIHRLVPERPLILGGIRLEHACGLLGHSDADVLTHAIMDALLGALSLGDIGHYFPPSDPQWAGADSQVLLAKVAALIAERGWRVGNIDAVVVAERPKLKPYLDPMRDRLATTLGIDRDQISIKATTNEKLGPVGREEGIAAYAVALL 157          
The following BLAST results are available for this feature:
BLAST of EY650170 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ISPF_PORGI1.130e-3644.872-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_PHOLL1.130e-3648.722-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_GEOTN1.130e-3646.792-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_BACSK1.130e-3647.102-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_PELPD1.476e-3647.442-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_CLOD61.476e-3645.452-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_VIBCM1.928e-3647.742-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_VIBCH1.928e-3647.742-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_VIBC31.928e-3647.742-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_THEEB1.928e-3646.152-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-008-A08-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650170 ID=EY650170; Name=EY650170; organism=Citrus sinensis; type=EST; length=957bp
GGGNCCGTTTTTACGCCCCGACCCACGCGTCCGTACATACCTAGCAGACA
GCATTTCACGAACAGCGCCTCTCCTCTCTTCGTAAAATTAGATGGTGTTG
ACGATGGCCGCTCAATCATACACCACCACTCCTCTCCACAGCAAAATTAC
GAATAAGCCACTATGTCCTCCTCCGTTGAGTTTGAAGCCTCGTAGCTTAA
CCGCCAAACATCTCCGCACAACACAGTCAACGTCGCTGCCTCGTATTTCA
GTTTCAGCTGCAGCCATTTCTTCCATCGAAGTTAAAGAGTCATCGGCTTC
GATCCAACCGTCCAAATCAAAATCACTGCCTTTTCGTGTGGGCCACGGGT
TTGATCTTCATAGATTGGAGCCTGGCTACCCTCTGATCATCGGTGGAATC
AATGTTCCCCACGAGAGAGGCTGCGAGGCTCACTCTGACGGTGATGTTTT
GCTTCACTGTGTTGTGGATGCAATTTTGGGAGCATTGGGTCTTCCTGATA
TTGGTCAGATATTTCCTGATTCTGATCCTAAGTGGAAGGGTGCACCATCC
TCTGTTTTTATCAAAGAAGCTGTGAGACTCATGGATGAGGCCGGCTATGA
GATTGGCAACTTGGATGCCACGCTGATTCTTCAAAGACCAAAATTGAGCC
CATACAATGAGACTATCCGAACCAACTTGTCTGAACTGCTANGAGCAGAC
CCCACCGTTGTAAATCTGAAAGCGAAAACTCATGAAAAAGNTGATAGCCC
TGGTGAAAAATCGAGTATTGCAGCTCACACTGTGATCCTTCTCATGAAGA
AGTAAATAAACGATTTGGGAATTGTCTNAATGTAGCAGNTGNATCCTATT
ATCATTGGTGGATTGNATTCTGCTTACAAGACTATTACTGGGATAGATTC
CATGATAGGTGTNGTTCATACTTACATGCTTCAGTATGGCAGGTCTTNAC
TAAAAAA
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