EY650170
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_SYNP6 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=ispF PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.928e-36 Identity = 69/156 (44.23%), Postives = 105/156 (67.31%), Query Frame = 2 Query: 332 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMK 799 FR+G+G+D+HRL G PLI+GGI + H G + HSD DVL H ++DA+LGAL L DIG FP +DP+WKGA S + + +L+ + G+ IGNLD+ ++ ++PKL P+ +R L+++L +P + +KA T+EK G + I A+ V LL++ Sbjct: 4 FRIGNGYDIHRLVEGRPLILGGIQLEHSLGLDGHSDADVLTHAIMDALLGALSLGDIGHYFPPTDPQWKGADSLKLLAQVNQLIRDRGWTIGNLDSVVVAEQPKLKPHIAAMRDRLAKVLELEPDQIGIKATTNEKLGPTGREEGICAYAVALLVR 159
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_SYNE7 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Synechococcus elongatus (strain PCC 7942) GN=ispF PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.928e-36 Identity = 69/156 (44.23%), Postives = 105/156 (67.31%), Query Frame = 2 Query: 332 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMK 799 FR+G+G+D+HRL G PLI+GGI + H G + HSD DVL H ++DA+LGAL L DIG FP +DP+WKGA S + + +L+ + G+ IGNLD+ ++ ++PKL P+ +R L+++L +P + +KA T+EK G + I A+ V LL++ Sbjct: 4 FRIGNGYDIHRLVEGRPLILGGIQLEHSLGLDGHSDADVLTHAIMDALLGALSLGDIGHYFPPTDPQWKGADSLKLLAQVNQLIRDRGWTIGNLDSVVVAEQPKLKPHIAAMRDRLAKVLELEPDQIGIKATTNEKLGPTGREEGICAYAVALLVR 159
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_LARHH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Laribacter hongkongensis (strain HLHK9) GN=ispF PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.928e-36 Identity = 73/156 (46.79%), Postives = 106/156 (67.95%), Query Frame = 2 Query: 335 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMKK 802 R+G G+D+HRL G PL++GG+ +P ++G + HSD D L H + DA+ GA L DIG+ FPD+D ++KGA S V ++EAVR + EAG++I N+D+T+I Q P+L+PY E +R++L+ L P VN+KAKT E+ G IAA V LL + Sbjct: 4 RIGQGWDVHRLVEGRPLVLGGVTIPFDKGLDGHSDADALCHAITDALFGAAALGDIGRHFPDTDLEFKGADSRVLLREAVRRVREAGFDIVNVDSTVIAQAPRLAPYVEAMRSHLAADLGLSPDRVNVKAKTSERLGHLGRGEGIAADAVCLLQSR 159
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_HAES2 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Haemophilus somnus (strain 2336) GN=ispF PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.928e-36 Identity = 72/156 (46.15%), Postives = 107/156 (68.59%), Query Frame = 2 Query: 335 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMKK 802 R+GHGFD+H P+IIGG+ +P+E+G AHSDGDV LH + DA+LGA+ L DIG++FPD+D ++KGA S ++ A + + + GY++GN+D T+I Q PK+ PY +++RT +++ L D VN+KA T EK G IA V+LL+K+ Sbjct: 3 RIGHGFDVHAFGGEGPIIIGGVAIPYEKGLVAHSDGDVALHALTDALLGAMALGDIGKLFPDTDIQYKGADSRRLLRTAYQAILDKGYQVGNVDITIIAQAPKMRPYIDSMRTVIAQDLHCDIEQVNVKATTTEKLGFTGRSEGIACEAVVLLIKQ 158
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_AZOVD (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=ispF PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.928e-36 Identity = 72/154 (46.75%), Postives = 103/154 (66.88%), Query Frame = 2 Query: 335 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLM 796 R+GHG+D+HR G + +GG+ +PH G AHSDGDVLLH + DA+LGA L DIG+ FPD+DP++KG S V ++ V L+ E G+ +GN+DAT++ Q PK++P+ E +R +++E L VN+KA T EK G + IA H V LL+ Sbjct: 2 RIGHGYDVHRFAEGDFVTLGGVRIPHRFGLLAHSDGDVLLHALCDALLGAAALGDIGRHFPDTDPRFKGVDSRVLLRHVVALVREKGWRVGNVDATIVAQAPKMAPHIERMRLSIAEDLQVGVEQVNVKATTTEKLGFTGREEGIAVHAVALLL 155
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_ALHEH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=ispF PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.928e-36 Identity = 75/156 (48.08%), Postives = 104/156 (66.67%), Query Frame = 2 Query: 335 RVGHGFDLHRL-EPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMK 799 RVG GFD HR EPG PLI+GG+ VPHERG AHSDGDVL+H V D +LGA G D+G FPDSD +KG S + +++A++ + G+ + N+DATLI Q P+++P+ +R +L+ L P+ VN+KA T E+ PG IAA V+L+ + Sbjct: 3 RVGQGFDAHRFGEPGTPLILGGVQVPHERGLAAHSDGDVLMHAVTDGLLGAAGEGDLGTHFPDSDDAYKGIDSRILLRDALQRVRAGGWRVVNVDATLIAQAPRMNPHVGAMRDHLAADLEVAPSAVNVKATTTERMGFPGRGEGIAAMAVVLIAR 158
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_ACTSZ (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=ispF PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.928e-36 Identity = 74/155 (47.74%), Postives = 102/155 (65.81%), Query Frame = 2 Query: 335 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMK 799 R+GHGFD+H L PLIIGG+ VP+ G AHSDGDV+LH + DA+LGA+ L DIG++FPD+D ++K S + ++EA R + E GY +GN+D T+I Q PK+ PY + +R ++E L VN+KA T EK G IA V+LL+K Sbjct: 3 RIGHGFDVHALGEARPLIIGGVKVPYHTGFIAHSDGDVVLHALTDALLGAVALGDIGKLFPDTDMQFKDIDSRILLREAFRRVKEKGYAVGNVDVTIIAQAPKMRPYIDAMRAVIAEDLQCGIDQVNVKATTTEKLGFTGRSEGIATEAVVLLVK 157
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_PSEMY (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Pseudomonas mendocina (strain ymp) GN=ispF PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 2.518e-36 Identity = 72/155 (46.45%), Postives = 105/155 (67.74%), Query Frame = 2 Query: 335 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMK 799 R+GHG+D+HR G + +GG+ +PH+ G AHSDGDVLLH + DA+LGA+ L DIG+ FPD+DP +KGA S ++ + L+ GY +GN+DAT+I Q PK++P+ +++R ++E L + VN+KA T EK G + IA H V LL+K Sbjct: 2 RIGHGYDVHRFGEGDFITLGGVRIPHKFGLVAHSDGDVLLHALSDALLGAVALGDIGKHFPDTDPTFKGADSRALLRHVMSLVRGKGYAVGNVDATIIAQAPKMAPHIQSMRERIAEDLGVELDQVNVKATTTEKLGFTGREEGIAVHAVALLVK 156
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_CYAP4 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=ispF PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 2.518e-36 Identity = 68/154 (44.16%), Postives = 101/154 (65.58%), Query Frame = 2 Query: 335 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLM 796 R+G+G+D+HRL PLI+GG+N+PHE G HSD DVL H ++DA+LGAL L DIG FP DP+W GA S + + +L+ E G+++GN+D+ ++ +RPKL P+ +R LS +L P + +KA T+EK G + I A+ V +L+ Sbjct: 5 RIGNGYDIHRLVSDRPLILGGVNIPHELGLLGHSDADVLTHAIMDALLGALSLGDIGHYFPPGDPQWAGADSLKLLAQVHQLVQERGWQVGNIDSVIVAERPKLKPHLAAMRDRLSAVLKVKPDQIGIKATTNEKLGPEGREEGICAYAVAVLV 158
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_CALS8 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=ispF PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 2.518e-36 Identity = 68/154 (44.16%), Postives = 104/154 (67.53%), Query Frame = 2 Query: 332 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILL 793 F+VG GFD+HR LI+GG+ +P E+G HSD DVL+H ++DAILGA+G DIG++FPD+D K+K S V +KE +L+ G I N+D T++ Q+PK+SPY + ++TN+++ L + T VN+K KT E G + ++A+ ++LL Sbjct: 2 FKVGFGFDVHRFSEDRKLILGGVEIPFEKGLLGHSDADVLIHAIIDAILGAMGENDIGRLFPDTDMKYKDISSIVLLKEVSKLLKNKGMSIINIDTTIVAQKPKISPYTDEMKTNIAKALNIEKTQVNIKGKTTEGLGFEGREEGVSAYAIVLL 155 The following BLAST results are available for this feature:
BLAST of EY650170 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY650170 ID=EY650170; Name=EY650170; organism=Citrus sinensis; type=EST; length=957bpback to top |