EY650170

Overview
NameEY650170
Unique NameEY650170
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length957
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_ANASP (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Anabaena sp. (strain PCC 7120) GN=ispF PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.518e-36
Identity = 68/157 (43.31%), Postives = 105/157 (66.88%), Query Frame = 2
Query:  326 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLM 796
            +  R+G+G+D+HRL     LI+GG+++PHE G   HSD DVL H ++DA+LGAL L DIG  FP +DP+W GA S V + +   L+   G+ IGN+D+ ++ +RPKL P+ +T+R  L+++L  +P  + +KA T+EK    G +  I A+ V+LL+
Sbjct:    3 MSIRIGNGYDIHRLVSDRALILGGVHIPHELGLLGHSDADVLTHAIMDAMLGALSLGDIGHYFPPTDPQWAGADSLVLLSQVNELIRTQGWRIGNIDSVVVAERPKLKPHIKTMRDKLADILQLEPNQIGVKATTNEKLGPVGREEGICAYAVVLLV 159          
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_VIBHB (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=ispF PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 3.288e-36
Identity = 71/156 (45.51%), Postives = 103/156 (66.03%), Query Frame = 2
Query:  335 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMKK 802
            R+GHGFD+H+     P+IIGG+ +P+E+G  AHSDGDV LH + DA+LGA+   DIG+ FPD+D KWKGA S   +K+  R + E GY +GN D T++ Q PK++P+ + +   ++E L  D + +N+KA T E+    G K  IA   V+LL K+
Sbjct:    3 RIGHGFDVHKFGGEGPVIIGGVAIPYEQGLIAHSDGDVALHALTDALLGAIAAGDIGRHFPDTDDKWKGADSRELLKDVYRRVKEQGYRLGNADVTIMAQAPKMAPHIDAMCAAIAEDLETDISNINVKATTTERLGFTGRKEGIATEAVVLLFKQ 158          
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_SHESR (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Shewanella sp. (strain MR-7) GN=ispF PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 3.288e-36
Identity = 75/159 (47.17%), Postives = 103/159 (64.78%), Query Frame = 2
Query:  326 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMKK 802
            +  R+GHGFD+H+     PLI+ G+ VP+E G  AHSDGDV+LH + DAILGA+ L DIG+ FPD+D  +KGA S V ++    L    G+E+GNLD T+I Q PK++P+ E +R  L+  L AD   +N+KA T EK    G K  IA   V+LL ++
Sbjct:    1 MKIRIGHGFDVHKFGEARPLILCGVEVPYETGLVAHSDGDVVLHAISDAILGAMALGDIGKHFPDTDAAYKGADSRVLLRHCYALARAKGFELGNLDVTIIAQAPKMAPHIEDMRQVLAADLNADIADINVKATTTEKLGFTGRKEGIAVEAVVLLSRQ 159          
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_SHESM (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Shewanella sp. (strain MR-4) GN=ispF PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 3.288e-36
Identity = 75/159 (47.17%), Postives = 103/159 (64.78%), Query Frame = 2
Query:  326 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMKK 802
            +  R+GHGFD+H+     PLI+ G+ VP+E G  AHSDGDV+LH + DAILGA+ L DIG+ FPD+D  +KGA S V ++    L    G+E+GNLD T+I Q PK++P+ E +R  L+  L AD   +N+KA T EK    G K  IA   V+LL ++
Sbjct:    1 MKIRIGHGFDVHKFGEARPLILCGVEVPYETGLVAHSDGDVVLHAISDAILGAMALGDIGKHFPDTDAAYKGADSRVLLRHCYALARAKGFELGNLDVTIIAQAPKMAPHIEDMRQVLAADLNADIADINVKATTTEKLGFTGRKEGIAVEAVVLLSRQ 159          
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_SHESA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Shewanella sp. (strain ANA-3) GN=ispF PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 3.288e-36
Identity = 75/159 (47.17%), Postives = 103/159 (64.78%), Query Frame = 2
Query:  326 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMKK 802
            +  R+GHGFD+H+     PLI+ G+ VP+E G  AHSDGDV+LH + DAILGA+ L DIG+ FPD+D  +KGA S V ++    L    G+E+GNLD T+I Q PK++P+ E +R  L+  L AD   +N+KA T EK    G K  IA   V+LL ++
Sbjct:    1 MKIRIGHGFDVHKFGEARPLILCGVEVPYETGLVAHSDGDVVLHAISDAILGAMALGDIGKHFPDTDAAYKGADSRVLLRHCYALARAKGFELGNLDVTIIAQAPKMAPHIEDMRQVLAADLNADIADINVKATTTEKLGFTGRKEGIAVEAVVLLSRQ 159          
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_SHEON (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Shewanella oneidensis GN=ispF PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 3.288e-36
Identity = 75/159 (47.17%), Postives = 103/159 (64.78%), Query Frame = 2
Query:  326 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMKK 802
            +  R+GHGFD+H+     PLI+ G+ VP+E G  AHSDGDV+LH + DAILGA+ L DIG+ FPD+D  +KGA S V ++    L    G+E+GNLD T+I Q PK++P+ E +R  L+  L AD   +N+KA T EK    G K  IA   V+LL ++
Sbjct:    1 MKIRIGHGFDVHKFGEPRPLILCGVEVPYETGLVAHSDGDVVLHAISDAILGAMALGDIGKHFPDTDAAYKGADSRVLLRHCYALAKAKGFELGNLDVTIIAQAPKMAPHIEDMRQVLAADLNADVADINVKATTTEKLGFTGRKEGIAVEAVVLLSRQ 159          
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_VIBPA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Vibrio parahaemolyticus GN=ispF PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 4.294e-36
Identity = 71/156 (45.51%), Postives = 103/156 (66.03%), Query Frame = 2
Query:  335 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMKK 802
            R+GHGFD+H+     P+IIGG+ +P+E+G  AHSDGDV LH + DA+LGA+   DIG+ FPD+D KWKGA S   +K+  R + E GY +GN D T++ Q PK++P+ + +   ++E L  D + +N+KA T E+    G K  IA   V+LL K+
Sbjct:    3 RIGHGFDVHKFGGEGPVIIGGVAIPYEQGLIAHSDGDVALHALTDALLGAIAAGDIGRHFPDTDDKWKGANSRELLKDVYRRVKEQGYRLGNADVTIMAQAPKMAPHIDAMCAAIAEDLETDISNINVKATTTERLGFTGRKEGIATEAVVLLFKQ 158          
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_VIBF1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=ispF PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 4.294e-36
Identity = 72/155 (46.45%), Postives = 103/155 (66.45%), Query Frame = 2
Query:  335 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMK 799
            R+GHGFD+H+     P+IIGG++VP+E+G  AHSDGDV LH + DA+LGA+   DIG+ FPD+D KWKGA S   +++  R + E G+ +GN D T+I Q PK++PY + +   ++E L  +   VN+KA T E+    G K  IA   V+LL+K
Sbjct:    2 RIGHGFDVHKFGGEGPVIIGGVSVPYEQGLIAHSDGDVALHALCDALLGAIAEGDIGRHFPDTDDKWKGADSRALLRDVYRRVKEKGFALGNADVTIIAQAPKMAPYIQAMCNAIAEDLETELDNVNVKATTSERLGFTGRKEGIACEAVVLLVK 156          
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_HAEIN (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Haemophilus influenzae GN=ispF PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 4.294e-36
Identity = 75/156 (48.08%), Postives = 102/156 (65.38%), Query Frame = 2
Query:  335 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMKK 802
            R+GHGFD+H      PLIIGG+ VP+  G  AHSDGDV LH + DAILGA  L DIG++FPD+D ++K A S   ++EA R + E GY+IGN+D T+I Q PK+ P+ + +R  ++E L  D   VN+KA T EK    G +  IA   V LL+++
Sbjct:    3 RIGHGFDVHAFGEDRPLIIGGVEVPYHTGFIAHSDGDVALHALTDAILGAAALGDIGKLFPDTDMQYKNADSRGLLREAFRQVQEKGYKIGNVDITIIAQAPKMRPHIDAMRAKIAEDLQCDIEQVNVKATTTEKLGFTGRQEGIACEAVALLIRQ 158          
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_HAEIE (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Haemophilus influenzae (strain PittEE) GN=ispF PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 4.294e-36
Identity = 75/156 (48.08%), Postives = 102/156 (65.38%), Query Frame = 2
Query:  335 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMKK 802
            R+GHGFD+H      PLIIGG+ VP+  G  AHSDGDV LH + DAILGA  L DIG++FPD+D ++K A S   ++EA R + E GY+IGN+D T+I Q PK+ P+ + +R  ++E L  D   VN+KA T EK    G +  IA   V LL+++
Sbjct:    3 RIGHGFDVHAFGEDRPLIIGGVEVPYHTGFIAHSDGDVALHALTDAILGAAALGDIGKLFPDTDMQYKNADSRGLLREAFRQVQEKGYKIGNVDITIIAQAPKMRPHIDAMRAKIAEDLQCDIEQVNVKATTTEKLGFTGRQEGIACEAVALLIRQ 158          
The following BLAST results are available for this feature:
BLAST of EY650170 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ISPF_ANASP2.518e-3643.312-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_VIBHB3.288e-3645.512-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_SHESR3.288e-3647.172-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_SHESM3.288e-3647.172-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_SHESA3.288e-3647.172-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_SHEON3.288e-3647.172-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_VIBPA4.294e-3645.512-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_VIBF14.294e-3646.452-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_HAEIN4.294e-3648.082-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_HAEIE4.294e-3648.082-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-008-A08-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650170 ID=EY650170; Name=EY650170; organism=Citrus sinensis; type=EST; length=957bp
GGGNCCGTTTTTACGCCCCGACCCACGCGTCCGTACATACCTAGCAGACA
GCATTTCACGAACAGCGCCTCTCCTCTCTTCGTAAAATTAGATGGTGTTG
ACGATGGCCGCTCAATCATACACCACCACTCCTCTCCACAGCAAAATTAC
GAATAAGCCACTATGTCCTCCTCCGTTGAGTTTGAAGCCTCGTAGCTTAA
CCGCCAAACATCTCCGCACAACACAGTCAACGTCGCTGCCTCGTATTTCA
GTTTCAGCTGCAGCCATTTCTTCCATCGAAGTTAAAGAGTCATCGGCTTC
GATCCAACCGTCCAAATCAAAATCACTGCCTTTTCGTGTGGGCCACGGGT
TTGATCTTCATAGATTGGAGCCTGGCTACCCTCTGATCATCGGTGGAATC
AATGTTCCCCACGAGAGAGGCTGCGAGGCTCACTCTGACGGTGATGTTTT
GCTTCACTGTGTTGTGGATGCAATTTTGGGAGCATTGGGTCTTCCTGATA
TTGGTCAGATATTTCCTGATTCTGATCCTAAGTGGAAGGGTGCACCATCC
TCTGTTTTTATCAAAGAAGCTGTGAGACTCATGGATGAGGCCGGCTATGA
GATTGGCAACTTGGATGCCACGCTGATTCTTCAAAGACCAAAATTGAGCC
CATACAATGAGACTATCCGAACCAACTTGTCTGAACTGCTANGAGCAGAC
CCCACCGTTGTAAATCTGAAAGCGAAAACTCATGAAAAAGNTGATAGCCC
TGGTGAAAAATCGAGTATTGCAGCTCACACTGTGATCCTTCTCATGAAGA
AGTAAATAAACGATTTGGGAATTGTCTNAATGTAGCAGNTGNATCCTATT
ATCATTGGTGGATTGNATTCTGCTTACAAGACTATTACTGGGATAGATTC
CATGATAGGTGTNGTTCATACTTACATGCTTCAGTATGGCAGGTCTTNAC
TAAAAAA
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