EY650170
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_ACAM1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Acaryochloris marina (strain MBIC 11017) GN=ispF PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 4.294e-36 Identity = 66/153 (43.14%), Postives = 105/153 (68.63%), Query Frame = 2 Query: 335 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILL 793 R+G+G+D+H+L G PLI+GG+ + H G + HSD DVL H ++DA+LGAL L DIG FP +DPKW GA S +++ +L+ + G++IGN+D+ ++ +RPKL P+ E +R +S++L P ++ +KA T+EK G++ I ++ V LL Sbjct: 5 RIGNGYDIHQLVEGRPLILGGVQIEHSLGLKGHSDADVLTHAIMDALLGALSLGDIGHYFPPTDPKWAGADSLKLLEQVHQLILDRGWQIGNIDSVVVAERPKLKPHIEAMRDRISQVLNLSPELIGIKATTNEKLGPVGQEQGICSYAVALL 157
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_PSEPK (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Pseudomonas putida (strain KT2440) GN=ispF PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 5.609e-36 Identity = 71/154 (46.10%), Postives = 106/154 (68.83%), Query Frame = 2 Query: 335 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLM 796 R+GHG+D+HR G + +GG+ +PH+ G AHSDGDVLLH + DA+LGA L DIG+ FPD+DP++KGA S ++ V ++ G+++GN+DAT++ Q PK++P+ ET+R ++E L + VN+KA T EK G + IA H+V LL+ Sbjct: 2 RIGHGYDVHRFCDGDFITLGGVRIPHKYGLLAHSDGDVLLHALSDALLGAAALGDIGKHFPDTDPQFKGADSRALLRHVVGIVKAKGWKVGNVDATIVAQAPKMAPHIETMRQLIAEDLQVELDQVNVKATTTEKLGFTGREEGIAVHSVALLL 155
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_PSEP1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=ispF PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 5.609e-36 Identity = 71/154 (46.10%), Postives = 106/154 (68.83%), Query Frame = 2 Query: 335 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLM 796 R+GHG+D+HR G + +GG+ +PH+ G AHSDGDVLLH + DA+LGA L DIG+ FPD+DP++KGA S ++ V ++ G+++GN+DAT++ Q PK++P+ ET+R ++E L + VN+KA T EK G + IA H+V LL+ Sbjct: 2 RIGHGYDVHRFCDGDFITLGGVRIPHKYGLLAHSDGDVLLHALSDALLGAAALGDIGKHFPDTDPQFKGADSRALLRHVVGIVKAKGWKVGNVDATIVAQAPKMAPHIETMRQLIAEDLQVELDQVNVKATTTEKLGFTGREEGIAVHSVALLL 155
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_NOSP7 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=ispF PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 5.609e-36 Identity = 68/156 (43.59%), Postives = 104/156 (66.67%), Query Frame = 2 Query: 335 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMKK 802 R+G+G+D+H+L LI+GGI +PHE G HSD DVL H ++DA+LGAL L DIG FP SDPKW GA S V + + +L+ + G+++GN+D+ ++ +RPKL P+ +R L+ +L + + +KA T+EK G + I A+ V+LL+K+ Sbjct: 5 RIGNGYDIHQLVSDRVLILGGIQIPHELGLLGHSDADVLTHAIMDAMLGALSLGDIGHYFPPSDPKWAGADSLVLLNQVHQLIRDRGWQVGNIDSVVVAERPKLKPHIHNMRDKLAAILELESNQIGIKATTNEKLGPVGREEGICAYAVVLLLKE 160
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_LISMC (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=ispF PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 5.609e-36 Identity = 72/155 (46.45%), Postives = 105/155 (67.74%), Query Frame = 2 Query: 335 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMK 799 R+G G+D+H+L LI+GGI +P+E+G HSD DVLLH + DAI+GA+G DIG FPD+D +K A S+ ++E + ++ G+ +GNLDAT+I ++PK++PY E ++ ++ELL AD VN+KA T EK G K IA+ V+LL K Sbjct: 3 RIGQGYDVHKLAYDRELIVGGIKIPYEKGLLGHSDADVLLHAITDAIIGAIGAGDIGHFFPDTDMAFKDADSAELLEEIWQKVEADGFRLGNLDATIIAEKPKMAPYVEQMKLRIAELLHADSAQVNVKATTTEKLGFTGRKEGIASLAVVLLEK 157
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_GEOLS (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=ispF PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 5.609e-36 Identity = 71/154 (46.10%), Postives = 103/154 (66.88%), Query Frame = 2 Query: 335 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLM 796 R+GHG+D+HRL LI+GG+++P E+G HSD DVLLH + DA+LGAL + DIG+ FPD+DP +KGA S ++ V L+ GY +GNLDAT+I QRPK++P+ + +R N++ + +N+KA T E G I+AH V+LL+ Sbjct: 2 RIGHGYDVHRLVEDRKLIMGGVDIPWEKGLLGHSDADVLLHAIADALLGALAMGDIGKHFPDTDPAFKGADSMKLLEHVVGLIRTQGYAVGNLDATIIAQRPKMAPHIQAMRENVARACGVEVDRINVKATTEEGLGFTGTGEGISAHAVVLLI 155
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_BORPD (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=ispF PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 5.609e-36 Identity = 76/158 (48.10%), Postives = 102/158 (64.56%), Query Frame = 2 Query: 326 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMK 799 +PFRVG G+D+H L G PLIIGG+ +PH G + HSD DVLLH V DA+LGA GL DIG+ FPD+DP ++GA S V +++AV + AG+ N+DAT+ Q PK+ P+ + N++ D VN+KAKT+E G K IAA V LL + Sbjct: 3 VPFRVGQGYDVHALVAGRPLIIGGVTIPHTHGLQGHSDADVLLHAVTDALLGAAGLGDIGRHFPDTDPAYRGADSRVLLRDAVAKVRAAGWAPVNIDATVHAQAPKIGPHAGAMVANIAADAGIDSASVNIKAKTNEGLGYLGRKEGIAATVVALLAR 160
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_ANAVT (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=ispF PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 5.609e-36 Identity = 68/157 (43.31%), Postives = 104/157 (66.24%), Query Frame = 2 Query: 326 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLM 796 + R+G+G+D+HRL LI+GG+++PHE G HSD DVL H ++DA+LGAL L DIG FP +DP+W GA S V + + L+ G+ IGN+D+ ++ +RPKL P+ +T+R L+ +L +P + +KA T+EK G + I A+ V+LL+ Sbjct: 3 MSIRIGNGYDIHRLVSDRALILGGVHIPHELGLLGHSDADVLTHAIMDAMLGALSLGDIGHYFPPTDPQWAGADSLVLLNQVNELIRAQGWRIGNIDSVVVAERPKLKPHIKTMRDKLANVLQLEPNQIGVKATTNEKLGPVGREEGICAYAVVLLV 159
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_THETN (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Thermoanaerobacter tengcongensis GN=ispF PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 7.325e-36 Identity = 73/156 (46.79%), Postives = 104/156 (66.67%), Query Frame = 2 Query: 335 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMKK 802 RVG G+D+HR E G L++GGI +P E+G + HSDGDVL+H ++D ILGA GL DIG+ FPD+D +K S + +K + L+ E Y + N+D ++ +RPKLSPY + IRT+L+ELL VN+KAKT E G + I A+ V+LL ++ Sbjct: 5 RVGIGYDVHRFEEGKKLMLGGIEIPFEKGLKGHSDGDVLIHALIDGILGAAGLGDIGEHFPDTDVAYKEVDSKILLKRVLELVSE-HYVVNNVDCIVVTERPKLSPYKDRIRTSLAELLGVSKERVNVKAKTEEGLGFTGREEGIKAYAVVLLEER 159
BLAST of EY650170 vs. ExPASy Swiss-Prot
Match: ISPF_SOLUE (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Solibacter usitatus (strain Ellin6076) GN=ispF PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 7.325e-36 Identity = 76/155 (49.03%), Postives = 99/155 (63.87%), Query Frame = 2 Query: 335 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYNETIRTNLSELLXADPTVVNLKAKTHEKXDSPGEKSSIAAHTVILLMK 799 R G G+D+HR+ G +I+GG+ VP E G E HSD DVL H + DAILGA L DIG FPDSDP+WKG S VF++ A L + GY I N+D+T+IL+RPKL + +TIR L+E L D V++K KT EK GE S + ++ L K Sbjct: 5 RTGLGWDVHRIATGRKMILGGVTVPCEFGLEGHSDADVLAHAITDAILGAAALGDIGMHFPDSDPRWKGCDSLVFLRHARDLATQKGYRIVNVDSTIILERPKLKDFRQTIRERLAETLELDVDRVSVKFKTAEKVGPVGEGRSAESQAIVTLEK 159 The following BLAST results are available for this feature:
BLAST of EY650170 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY650170 ID=EY650170; Name=EY650170; organism=Citrus sinensis; type=EST; length=957bpback to top |