EY650146

Overview
NameEY650146
Unique NameEY650146
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650146 vs. ExPASy Swiss-Prot
Match: HOX2_ORYSJ (Homeobox-leucine zipper protein HOX2 OS=Oryza sativa subsp. japonica GN=HOX2 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.737e-32
Identity = 77/153 (50.33%), Postives = 91/153 (59.48%), Query Frame = 1
Query:  244 RKKLRLSKEQSLLLEETFKEHSTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELXSLKLSPQ------LYMNMNPPTTLTMCPSCERXXXXXXXXXXXXXXNGTTRLPIGPNHQRLTPVS 684
            RKKLRLSK+Q+ +LEE FK HST               RPRQVEVWFQNRRARTKLKQTEVDCEYLKR CE L +EN+RL+KE+ +L +LK +P       +  + +   TLTMCPSC R                T   P  PNHQ+  P S
Sbjct:  114 RKKLRLSKDQAAVLEECFKTHSTLNPKQKVALANRLGLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRWCERLADENKRLEKELADLRALKAAPSPASASAMQPSSSAAATLTMCPSCRRV--------------ATAGAPHQPNHQQCHPKS 252          
BLAST of EY650146 vs. ExPASy Swiss-Prot
Match: HOX2_ORYSI (Homeobox-leucine zipper protein HOX2 OS=Oryza sativa subsp. indica GN=HOX2 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.737e-32
Identity = 77/153 (50.33%), Postives = 91/153 (59.48%), Query Frame = 1
Query:  244 RKKLRLSKEQSLLLEETFKEHSTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELXSLKLSPQ------LYMNMNPPTTLTMCPSCERXXXXXXXXXXXXXXNGTTRLPIGPNHQRLTPVS 684
            RKKLRLSK+Q+ +LEE FK HST               RPRQVEVWFQNRRARTKLKQTEVDCEYLKR CE L +EN+RL+KE+ +L +LK +P       +  + +   TLTMCPSC R                T   P  PNHQ+  P S
Sbjct:  114 RKKLRLSKDQAAVLEECFKTHSTLNPKQKVALANRLGLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRWCERLADENKRLEKELADLRALKAAPSPASASAMQPSSSAAATLTMCPSCRRV--------------ATAGAPHQPNHQQCHPKS 252          
BLAST of EY650146 vs. ExPASy Swiss-Prot
Match: HOX3_ORYSJ (Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. japonica GN=HOX3 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.952e-31
Identity = 83/197 (42.13%), Postives = 108/197 (54.82%), Query Frame = 1
Query:   16 DRNSGCGSFLRGIDVNQAPTVADCEEENGVXXXXXXXXXXXGKRSEREPIG--DETEAERASCSRXXXXXXXXXXXXXRKKLRLSKEQSLLLEETFKEHSTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELXSLKLSPQLYMNMN-----PPTTLTMCPSCER 585
            + N+G G  +R +D+NQ  +                     G   E  P+G  +E E ER                   KKLRLSKEQS LLEE+F+ + T               RPRQVEVWFQNRRARTKLKQTE++CEYLKRC  +LTEENRRLQ+EV+EL +++++P   ++ +     P + LTMCP CER
Sbjct:   31 NNNAGGGCNMRDLDINQPAS---------------------GGEEEEFPMGSVEEDEEERG-----------VGGPHRPKKLRLSKEQSRLLEESFRLNHTLTPKQKEALAIKLKLRPRQVEVWFQNRRARTKLKQTEMECEYLKRCFGSLTEENRRLQREVEELRAMRVAPPTVLSPHTRQPLPASALTMCPRCER 195          
BLAST of EY650146 vs. ExPASy Swiss-Prot
Match: HOX3_ORYSI (Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. indica GN=HOX3 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.952e-31
Identity = 83/197 (42.13%), Postives = 108/197 (54.82%), Query Frame = 1
Query:   16 DRNSGCGSFLRGIDVNQAPTVADCEEENGVXXXXXXXXXXXGKRSEREPIG--DETEAERASCSRXXXXXXXXXXXXXRKKLRLSKEQSLLLEETFKEHSTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELXSLKLSPQLYMNMN-----PPTTLTMCPSCER 585
            + N+G G  +R +D+NQ  +                     G   E  P+G  +E E ER                   KKLRLSKEQS LLEE+F+ + T               RPRQVEVWFQNRRARTKLKQTE++CEYLKRC  +LTEENRRLQ+EV+EL +++++P   ++ +     P + LTMCP CER
Sbjct:   31 NNNAGGGCNMRDLDINQPAS---------------------GGEEEEFPMGSVEEDEEERG-----------VGGPHRPKKLRLSKEQSRLLEESFRLNHTLTPKQKEALAIKLKLRPRQVEVWFQNRRARTKLKQTEMECEYLKRCFGSLTEENRRLQREVEELRAMRVAPPTVLSPHTRQPLPASALTMCPRCER 195          
BLAST of EY650146 vs. ExPASy Swiss-Prot
Match: HOX7_ORYSJ (Homeobox-leucine zipper protein HOX7 OS=Oryza sativa subsp. japonica GN=HOX7 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.805e-31
Identity = 84/188 (44.68%), Postives = 97/188 (51.60%), Query Frame = 1
Query:   46 RGIDVNQAPTVADCEEENGVXXXXXXXXXXXGKRSEREPIGDETEAERASCSRXXXXXXXXXXXXXRKKLRLSKEQSLLLEETFKEHSTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQEL-----XSLKLSPQLYMNMNPP----TTLTMCPSCE 582
            RG DVN  P       + G             + S R+ + D+  A+                   RKKLRLSKEQS  LE++FKEHST               RPRQVEVWFQNRRARTKLKQTEVDCE+LKRCCE LT ENRRLQ+EV EL      +    P LY   + P    T   +CPSCE
Sbjct:  102 RGFDVNTRPA------DGGAEAGRPSSPSSMQEASTRQQVADQEAADDED----------NGGGGARKKLRLSKEQSSFLEDSFKEHSTLTPKQKSDLANRLNLRPRQVEVWFQNRRARTKLKQTEVDCEHLKRCCERLTRENRRLQREVAELRGTLRTTTSSYPPLYGLHHLPAAAGTVFRVCPSCE 273          
BLAST of EY650146 vs. ExPASy Swiss-Prot
Match: HOX7_ORYSI (Homeobox-leucine zipper protein HOX7 OS=Oryza sativa subsp. indica GN=HOX7 PE=1 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 8.805e-31
Identity = 84/188 (44.68%), Postives = 97/188 (51.60%), Query Frame = 1
Query:   46 RGIDVNQAPTVADCEEENGVXXXXXXXXXXXGKRSEREPIGDETEAERASCSRXXXXXXXXXXXXXRKKLRLSKEQSLLLEETFKEHSTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQEL-----XSLKLSPQLYMNMNPP----TTLTMCPSCE 582
            RG DVN  P       + G             + S R+ + D+  A+                   RKKLRLSKEQS  LE++FKEHST               RPRQVEVWFQNRRARTKLKQTEVDCE+LKRCCE LT ENRRLQ+EV EL      +    P LY   + P    T   +CPSCE
Sbjct:  102 RGFDVNTRPA------DGGAEAGRPSSPSSMQEASTRQQVADQEAADDED----------NGGGGARKKLRLSKEQSSFLEDSFKEHSTLTPKQKSDLANRLNLRPRQVEVWFQNRRARTKLKQTEVDCEHLKRCCERLTRENRRLQREVAELRGALRTTTSSYPPLYGLHHLPAAAGTVFRVCPSCE 273          
BLAST of EY650146 vs. ExPASy Swiss-Prot
Match: HOX28_ORYSJ (Homeobox-leucine zipper protein HOX28 OS=Oryza sativa subsp. japonica GN=HOX28 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.502e-30
Identity = 76/149 (51.01%), Postives = 88/149 (59.06%), Query Frame = 1
Query:  139 GKRSEREPIGDETEAERASCSRXXXXXXXXXXXXXRKKLRLSKEQSLLLEETFKEHSTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELXSLKLSPQLYMNMNPPTTLTMCPSCER 585
            GKR      GDE +   A C               RKKLRLSK+Q+ +LEE FK H T               RPRQVEVWFQNRRARTKLKQTEVDCE+LKR C+ L ++NRRL KE+ EL +LK +P       P TTLTMC SC+R
Sbjct:   68 GKRGSGSGSGDEVDD--AGCD--------VGGGGARKKLRLSKDQAAVLEECFKTHHTLTPKQKVALAKSLNLRPRQVEVWFQNRRARTKLKQTEVDCEHLKRWCDQLADDNRRLHKELAELRALKATPTPPAAAPPLTTLTMCLSCKR 206          
BLAST of EY650146 vs. ExPASy Swiss-Prot
Match: HOX28_ORYSI (Homeobox-leucine zipper protein HOX28 OS=Oryza sativa subsp. indica GN=HOX28 PE=2 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 1.502e-30
Identity = 76/149 (51.01%), Postives = 88/149 (59.06%), Query Frame = 1
Query:  139 GKRSEREPIGDETEAERASCSRXXXXXXXXXXXXXRKKLRLSKEQSLLLEETFKEHSTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELXSLKLSPQLYMNMNPPTTLTMCPSCER 585
            GKR      GDE +   A C               RKKLRLSK+Q+ +LEE FK H T               RPRQVEVWFQNRRARTKLKQTEVDCE+LKR C+ L ++NRRL KE+ EL +LK +P       P TTLTMC SC+R
Sbjct:   68 GKRGSGSGSGDEVDD--AGCD--------VGGGGARKKLRLSKDQAAVLEECFKTHHTLTPKQKVALAKSLNLRPRQVEVWFQNRRARTKLKQTEVDCEHLKRWCDQLADDNRRLHKELAELRALKATPTPPAAAPPLTTLTMCLSCKR 206          
BLAST of EY650146 vs. ExPASy Swiss-Prot
Match: ATB17_ARATH (Homeobox-leucine zipper protein ATHB-17 OS=Arabidopsis thaliana GN=ATHB-17 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.090e-28
Identity = 62/114 (54.39%), Postives = 82/114 (71.93%), Query Frame = 1
Query:  244 RKKLRLSKEQSLLLEETFKEHSTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELXSLKLSPQLYMNMNPPTTLTMCPSCER 585
            RKKLRL++EQS LLE++F+++ T               RPRQ+EVWFQNRRAR+KLKQTE++CEYLKR   +LTEEN RL +EV+EL ++K+ P     +N  ++LTMCP CER
Sbjct:  138 RKKLRLTREQSRLLEDSFRQNHTLNPKQKEVLAKHLMLRPRQIEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEENHRLHREVEELRAMKVGP---TTVNSASSLTMCPRCER 248          
BLAST of EY650146 vs. ExPASy Swiss-Prot
Match: HOX18_ORYSJ (Homeobox-leucine zipper protein HOX18 OS=Oryza sativa subsp. japonica GN=HOX18 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.714e-27
Identity = 64/123 (52.03%), Postives = 79/123 (64.23%), Query Frame = 1
Query:  244 RKKLRLSKEQSLLLEETFKEHSTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELXSL------KLSPQLYMNMNPPTTLTM---CPSCER 585
            RKKL+L+KEQS LLE++F+ H+                +PRQVEVWFQNRRARTKLKQTEVDCE+LKRCCE+LTEEN++L+ E+ EL  L          QLY+         M   CPSCE+
Sbjct:  114 RKKLQLTKEQSTLLEDSFRVHNILSHAQKHELARQLKLKPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCESLTEENKQLKHELMELRRLASPAAAAAGSQLYVQFPRAAAAAMVNVCPSCEK 236          
The following BLAST results are available for this feature:
BLAST of EY650146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
HOX2_ORYSJ2.737e-3250.33Homeobox-leucine zipper protein HOX2 OS=Oryza sati... [more]
HOX2_ORYSI2.737e-3250.33Homeobox-leucine zipper protein HOX2 OS=Oryza sati... [more]
HOX3_ORYSJ3.952e-3142.13Homeobox-leucine zipper protein HOX3 OS=Oryza sati... [more]
HOX3_ORYSI3.952e-3142.13Homeobox-leucine zipper protein HOX3 OS=Oryza sati... [more]
HOX7_ORYSJ8.805e-3144.68Homeobox-leucine zipper protein HOX7 OS=Oryza sati... [more]
HOX7_ORYSI8.805e-3144.68Homeobox-leucine zipper protein HOX7 OS=Oryza sati... [more]
HOX28_ORYSJ1.502e-3051.01Homeobox-leucine zipper protein HOX28 OS=Oryza sat... [more]
HOX28_ORYSI1.502e-3051.01Homeobox-leucine zipper protein HOX28 OS=Oryza sat... [more]
ATB17_ARATH4.090e-2854.39Homeobox-leucine zipper protein ATHB-17 OS=Arabido... [more]
HOX18_ORYSJ7.714e-2752.03Homeobox-leucine zipper protein HOX18 OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-007-G07-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650146 ID=EY650146; Name=EY650146; organism=Citrus sinensis; type=EST; length=926bp
TAATTATGCTTTACAGATCGAAACTCAGGATGCGGATCATTCCTTAGAGG
AATAGATGTGAATCAGGCACCAACAGTGGCAGATTGCGAGGAAGAAAATG
GGGTTTCATCACCAAACAGCACTGTTTCTAGCATAAGTGGAAAGAGGAGT
GAGAGAGAGCCCATTGGAGATGAGACTGAGGCTGAAAGAGCGTCTTGCTC
TCGCGGCAGTGACGACGAAGACGGTGGCGCTGGTGATGCATCAAGAAAGA
AGCTGAGATTGTCGAAAGAACAGTCTTTGTTGCTTGAAGAGACCTTCAAA
GAGCATAGCACTCTCAATCCTAAGCAAAAGTTGGCTTTGGCAAAGCAGTT
GAATCTTAGGCCTAGACAAGTAGAAGTGTGGTTTCAGAACAGAAGGGCAA
GGACAAAGTTGAAGCAAACAGAGGTTGATTGTGAGTACTTAAAGAGATGC
TGCGAGAATCTAACGGAGGAGAACAGGAGATTGCAGAAGGAAGTGCAAGA
GCTTANATCATTGAAGCTTTCTCCTCAACTCTACATGAATATGAATCCTC
CCACGACACTCACAATGTGTCCCTCCTGTGAGCGTGTGGCTGTATCATCG
TCGTCGTCGTCATCCTCTGCTGCTGCCAACGGCACCACCCGTCTNCCCAT
TGGTCCTAACCATCAACGACTGACTCCAGTGAGCCCTTGGGCAGCATTAC
CAATCCACCNACCGTCGTATTATCAGCTTGGAATAAGGGCATTGTNCGTA
AAGAAGTAATTNGNNTATTANAAAGAGAGTANTAGGTTNGATNNTTGTTG
TATTATAACTGAAGGCTNCTGGGGTATACTGAGGATGCTCGTGTGACTAN
TGGNATTANGGGATATGGGNAGGACACCCTCTGTGGTCAATGAGCTANCA
TGAACATTTTGGGATCAGAAATGATT
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