EY650141

Overview
NameEY650141
Unique NameEY650141
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650141 vs. ExPASy Swiss-Prot
Match: GCSP_BURCC (Glycine dehydrogenase [decarboxylating] OS=Burkholderia cenocepacia (strain MC0-3) GN=gcvP PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.040e-35
Identity = 56/134 (41.79%), Postives = 80/134 (59.70%), Query Frame = 3
Query:  198 QTIDICITRA--DGFDIKGGVSDLKDIDYKSCDVCGVLVHYPGTEGEVLDYGDFIKNAHANGVNGCMATDLLALTIVNPPGELGADIGWGSAHRCGVPRGYGGAHAAFVGTAQEYRRRIAWRMGGGNVDSSGKP 593
            QT+++  TRA   G ++K G +     D    +  GVL+ YPG  G+V DY       HA G +  +A DLLALT++ PPGE GAD+  G+  R GVP G+GG HAA++    E++R++  R+ G  VD+ GKP
Sbjct:  196 QTLEVIRTRALPIGIEVKTGPA----ADAAQANAFGVLLQYPGVNGDVRDYRALTDAIHAAGGHVVVAADLLALTVLTPPGEWGADVAIGNTQRFGVPMGFGGPHAAYLAVRDEFKRQMPGRLVGVTVDAQGKP 325          

HSP 2 Score: 65.0846 bits (157), Expect = 1.040e-35
Identity = 34/58 (58.62%), Postives = 40/58 (68.97%), Query Frame = 1
Query:   13 AQGRLGGGGNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKNTFIIASN 186
            +QGRL    NFQ M+ADLTGL +SNASLLDE TAAAEAM +     K K N F +A +
Sbjct:  135 SQGRLEALLNFQQMVADLTGLAISNASLLDEATAAAEAMTLLQRTGKPKSNVFYVADD 192          
BLAST of EY650141 vs. ExPASy Swiss-Prot
Match: GCSP_BURCA (Glycine dehydrogenase [decarboxylating] OS=Burkholderia cenocepacia (strain AU 1054) GN=gcvP PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.040e-35
Identity = 56/134 (41.79%), Postives = 80/134 (59.70%), Query Frame = 3
Query:  198 QTIDICITRA--DGFDIKGGVSDLKDIDYKSCDVCGVLVHYPGTEGEVLDYGDFIKNAHANGVNGCMATDLLALTIVNPPGELGADIGWGSAHRCGVPRGYGGAHAAFVGTAQEYRRRIAWRMGGGNVDSSGKP 593
            QT+++  TRA   G ++K G +     D    +  GVL+ YPG  G+V DY       HA G +  +A DLLALT++ PPGE GAD+  G+  R GVP G+GG HAA++    E++R++  R+ G  VD+ GKP
Sbjct:  196 QTLEVIRTRALPIGIEVKTGPA----ADAAQANAFGVLLQYPGVNGDVRDYRALTDAIHAAGGHVVVAADLLALTVLTPPGEWGADVAIGNTQRFGVPMGFGGPHAAYLAVRDEFKRQMPGRLVGVTVDAQGKP 325          

HSP 2 Score: 65.0846 bits (157), Expect = 1.040e-35
Identity = 34/58 (58.62%), Postives = 40/58 (68.97%), Query Frame = 1
Query:   13 AQGRLGGGGNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKNTFIIASN 186
            +QGRL    NFQ M+ADLTGL +SNASLLDE TAAAEAM +     K K N F +A +
Sbjct:  135 SQGRLEALLNFQQMVADLTGLAISNASLLDEATAAAEAMTLLQRTGKPKSNVFYVADD 192          
BLAST of EY650141 vs. ExPASy Swiss-Prot
Match: GCSP_DICDI (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Dictyostelium discoideum GN=gcvP PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.354e-35
Identity = 56/130 (43.08%), Postives = 73/130 (56.15%), Query Frame = 3
Query:  198 QTIDICITRADGFDIKGGVSDLKDIDYKSCDVCGVLVHYPGTEGEVLDYGDFIKNAHANGVNGCMATDLLALTIVNPPGELGADIGWGSAHRCGVPRGYGGAHAAFVGTAQEYRRRIAWRMGGGNVDSSG 587
            QTID   TRA+   I+  V D KD  +   DV G +V YP + G + DY +    AH        ATDLL+L ++ PPGE GADI  G++ R GVP G+GG HAAF  T  +Y R +  R+ G + D  G
Sbjct:  212 QTIDTIKTRAEPKGIRIEVVDSKDFKFTE-DVVGCIVQYPSSNGVITDYKEMADRAHQANALVVAATDLLSLALLKPPGEWGADIALGNSQRFGVPLGFGGPHAAFFSTKDKYARLLPGRIIGVSKDKQG 340          

HSP 2 Score: 69.707 bits (169), Expect = 1.354e-35
Identity = 35/49 (71.43%), Postives = 39/49 (79.59%), Query Frame = 1
Query:   13 AQGRLGGGGNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGK 159
            +QGRL    NFQTM+++ TGLPMSNASLLDE TAAAEAM MC NI K K
Sbjct:  150 SQGRLESLLNFQTMVSEFTGLPMSNASLLDEATAAAEAMQMCVNISKSK 198          
BLAST of EY650141 vs. ExPASy Swiss-Prot
Match: GCSP1_PSEAE (Glycine dehydrogenase [decarboxylating] 1 OS=Pseudomonas aeruginosa GN=gcvP1 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.355e-35
Identity = 56/132 (42.42%), Postives = 79/132 (59.85%), Query Frame = 3
Query:  198 QTIDICITRADGFDIKGGVSDLKDIDYKSCDVCGVLVHYPGTEGEVLDYGDFIKNAHANGVNGCMATDLLALTIVNPPGELGADIGWGSAHRCGVPRGYGGAHAAFVGTAQEYRRRIAWRMGGGNVDSSGKP 593
            QT+D+  TRA+   I+  V D   I+  S    G L+ YP  +GE++DY + +   HA      +A DLLALT++ PPGE GAD+  GSA R GVP G+GG HAA+  T   ++R +  R+ G ++D  GKP
Sbjct:  186 QTLDVLRTRAEPLGIEVVVGDESTIEDFSA-YFGALLQYPTCDGEIVDYRELVSRFHAVDALVAVAADLLALTLLTPPGEFGADVAIGSAQRFGVPLGFGGPHAAYFATRDAFKRDMPGRLVGVSIDRHGKP 316          

HSP 2 Score: 63.929 bits (154), Expect = 1.355e-35
Identity = 30/57 (52.63%), Postives = 41/57 (71.93%), Query Frame = 1
Query:   13 AQGRLGGGGNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKNTFIIAS 183
            +QGRL    NFQT+++DL+GLP++NAS+LDE TAAAEAM  C  + K + +    AS
Sbjct:  124 SQGRLEALLNFQTLVSDLSGLPIANASMLDEATAAAEAMTFCKRLSKNRTSQAFFAS 180          
BLAST of EY650141 vs. ExPASy Swiss-Prot
Match: GCSP_PSESM (Glycine dehydrogenase [decarboxylating] OS=Pseudomonas syringae pv. tomato GN=gcvP PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.355e-35
Identity = 55/131 (41.98%), Postives = 77/131 (58.78%), Query Frame = 3
Query:  198 QTIDICITRADGFDIKGGVSDLKDIDYKSCDVCGVLVHYPGTEGEVLDYGDFIKNAHANGVNGCMATDLLALTIVNPPGELGADIGWGSAHRCGVPRGYGGAHAAFVGTAQEYRRRIAWRMGGGNVDSSGK 590
            QT+D+  TRA+   I   V+D  ++   S D  G L+ YP + G+V DY +  +  H       +A DLLALT++ PPGE GAD+  GSA R GVP G+GG HAA+  T   ++R +  R+ G +VD  GK
Sbjct:  181 QTLDVLRTRAEPLGITVVVADETELGDVS-DYFGALLQYPASNGDVFDYRELAERFHGANALVAVAADLLALTLLTPPGEFGADVAIGSAQRFGVPLGFGGPHAAYFSTRDAFKRDMPGRLVGVSVDRHGK 310          

HSP 2 Score: 67.3958 bits (163), Expect = 1.355e-35
Identity = 34/58 (58.62%), Postives = 42/58 (72.41%), Query Frame = 1
Query:   13 AQGRLGGGGNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKNTFIIASN 186
            +QGRL    NFQT+I+DLTGLP++NASLLDE TAAAEAM  C  + K K +    AS+
Sbjct:  119 SQGRLESLLNFQTLISDLTGLPIANASLLDEATAAAEAMTFCKRLSKNKGSQQFFASS 176          
BLAST of EY650141 vs. ExPASy Swiss-Prot
Match: GCSP_BURPP (Glycine dehydrogenase [decarboxylating] OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=gcvP PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.764e-35
Identity = 55/134 (41.04%), Postives = 81/134 (60.45%), Query Frame = 3
Query:  198 QTIDICITRAD--GFDIKGGVSDLKDIDYKSCDVCGVLVHYPGTEGEVLDYGDFIKNAHANGVNGCMATDLLALTIVNPPGELGADIGWGSAHRCGVPRGYGGAHAAFVGTAQEYRRRIAWRMGGGNVDSSGKP 593
            QTI++  TRA   G ++K G +     +  + +  GVL+ YPG  G+V DY    +  HA G +  +A DLLALT++ PPGE GAD+  G+  R GVP G+GG HAA++    E++R++  R+ G  VD+ G P
Sbjct:  196 QTIEVVRTRATPVGIEVKVGPAS----EAANANAFGVLLQYPGVNGDVRDYRALTEAIHAAGGHVVVAADLLALTVLTPPGEWGADVAVGNTQRFGVPVGFGGPHAAYLAVRDEFKRQMPGRLVGVTVDAQGNP 325          

HSP 2 Score: 65.855 bits (159), Expect = 1.764e-35
Identity = 34/58 (58.62%), Postives = 40/58 (68.97%), Query Frame = 1
Query:   13 AQGRLGGGGNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKNTFIIASN 186
            +QGRL    NFQ MI DLTGL +SNASLLDE TAAAEAM +   + K K N F +A +
Sbjct:  135 SQGRLEALLNFQQMIVDLTGLAISNASLLDEATAAAEAMTLLQRVGKPKSNVFFVADD 192          
BLAST of EY650141 vs. ExPASy Swiss-Prot
Match: GCSP_ALISL (Glycine dehydrogenase [decarboxylating] OS=Aliivibrio salmonicida (strain LFI1238) GN=gcvP PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.765e-35
Identity = 63/132 (47.73%), Postives = 81/132 (61.36%), Query Frame = 3
Query:  198 QTIDICITRAD--GFDIKGGVSDLKDIDYKSCDVCGVLVHYPGTEGEVLDYGDFIKNAHANGVNGCMATDLLALTIVNPPGELGADIGWGSAHRCGVPRGYGGAHAAFVGTAQEYRRRIAWRMGGGNVDSSG 587
            QT+ +  TRA   GFD+   V D  D +  S DV G L+ YPGT GEV D    I+ AHA      +ATDLLA  ++ P GE+GADI  GSA R GVP GYGG HAAF+ T ++ +R +  R+ G ++DS G
Sbjct:  181 QTLAVIKTRAKFIGFDV---VVDT-DSNLDSHDVFGALLQYPGTTGEVKDLTTLIEQAHAKKTLVVVATDLLASVLLKPVGEMGADIAIGSAQRFGVPMGYGGPHAAFMATREKLKRSMPGRVIGVSIDSKG 308          

HSP 2 Score: 64.6994 bits (156), Expect = 1.765e-35
Identity = 32/58 (55.17%), Postives = 41/58 (70.69%), Query Frame = 1
Query:   13 AQGRLGGGGNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKNTFIIASN 186
            +QGRL    N+Q M+ DLTGL ++NASLLDE TAAAEAM +C    K K +TF +A +
Sbjct:  120 SQGRLEALLNYQQMVMDLTGLDIANASLLDEATAAAEAMTLCKRGGKNKSSTFFVADD 177          
BLAST of EY650141 vs. ExPASy Swiss-Prot
Match: GCSP_CHICK (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Gallus gallus GN=GLDC PE=1 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 2.992e-35
Identity = 56/118 (47.46%), Postives = 73/118 (61.86%), Query Frame = 3
Query:  246 GGVSDLK---DIDYKSCDVCGVLVHYPGTEGEVLDYGDFIKNAHANGVNGCMATDLLALTIVNPPGELGADIGWGSAHRCGVPRGYGGAHAAFVGTAQEYRRRIAWRMGGGNVDSSGK 590
            G +++LK   ++D+   DV GVL  YP TEG+V D+ + I+ AH NG   C ATDLLAL I+ PPGE G D+  GS+ R GVP  YGG HAAF    +   R +  RM G   D++GK
Sbjct:  225 GVITELKLPHEMDFSGKDVSGVLFQYPDTEGKVEDFSELIERAHQNGTLACCATDLLALCILKPPGEFGVDVVLGSSQRFGVPLCYGGPHAAFFAVKENLVRMMPGRMVGVTRDANGK 342          

HSP 2 Score: 61.6178 bits (148), Expect = 2.992e-35
Identity = 29/50 (58.00%), Postives = 39/50 (78.00%), Query Frame = 1
Query:   13 AQGRLGGGGNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKK 162
            +QGRL    N+QTM+ D+TG+ ++NASLLDEGTAAAEAM +C+   K +K
Sbjct:  159 SQGRLESLLNYQTMVCDITGMDVANASLLDEGTAAAEAMQLCHRQNKRRK 208          
BLAST of EY650141 vs. ExPASy Swiss-Prot
Match: GCSP_BURCM (Glycine dehydrogenase [decarboxylating] OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=gcvP PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.993e-35
Identity = 56/134 (41.79%), Postives = 81/134 (60.45%), Query Frame = 3
Query:  198 QTIDICITRA--DGFDIKGGVSDLKDIDYKSCDVCGVLVHYPGTEGEVLDYGDFIKNAHANGVNGCMATDLLALTIVNPPGELGADIGWGSAHRCGVPRGYGGAHAAFVGTAQEYRRRIAWRMGGGNVDSSGKP 593
            QT+++  TRA   G ++K G +     D    +  GVL+ YPG  G+V DY    +  HA G +  +A DLLALT++ PPGE GAD+  G+  R GVP G+GG HAA++    E++R++  R+ G  VD+ GKP
Sbjct:  196 QTLEVIRTRALPVGIEVKTGPA----ADAAQANAFGVLLQYPGVNGDVRDYRALTEAIHAAGGHVVVAADLLALTVLTPPGEWGADVAVGNTQRFGVPMGFGGPHAAYLAVRDEFKRQMPGRLVGVTVDAQGKP 325          

HSP 2 Score: 62.7734 bits (151), Expect = 2.993e-35
Identity = 33/58 (56.90%), Postives = 39/58 (67.24%), Query Frame = 1
Query:   13 AQGRLGGGGNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKNTFIIASN 186
            +QGRL    NFQ M+ADLTGL +SNASLLDE TAAAEAM +     K   N F +A +
Sbjct:  135 SQGRLEALLNFQQMVADLTGLAISNASLLDEATAAAEAMTLLQRTGKPASNVFYVADD 192          
BLAST of EY650141 vs. ExPASy Swiss-Prot
Match: GCSP_BURA4 (Glycine dehydrogenase [decarboxylating] OS=Burkholderia ambifaria (strain MC40-6) GN=gcvP PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.993e-35
Identity = 56/134 (41.79%), Postives = 81/134 (60.45%), Query Frame = 3
Query:  198 QTIDICITRA--DGFDIKGGVSDLKDIDYKSCDVCGVLVHYPGTEGEVLDYGDFIKNAHANGVNGCMATDLLALTIVNPPGELGADIGWGSAHRCGVPRGYGGAHAAFVGTAQEYRRRIAWRMGGGNVDSSGKP 593
            QT+++  TRA   G ++K G +     D    +  GVL+ YPG  G+V DY    +  HA G +  +A DLLALT++ PPGE GAD+  G+  R GVP G+GG HAA++    E++R++  R+ G  VD+ GKP
Sbjct:  196 QTLEVIRTRALPIGIEVKTGPA----ADAAQANAFGVLLQYPGVNGDVRDYRALTEAIHAAGGHVVVAADLLALTVLTPPGEWGADVAVGNTQRFGVPMGFGGPHAAYLAVRDEFKRQMPGRLVGVTVDAQGKP 325          

HSP 2 Score: 62.7734 bits (151), Expect = 2.993e-35
Identity = 33/58 (56.90%), Postives = 39/58 (67.24%), Query Frame = 1
Query:   13 AQGRLGGGGNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKNTFIIASN 186
            +QGRL    NFQ M+ADLTGL +SNASLLDE TAAAEAM +     K   N F +A +
Sbjct:  135 SQGRLEALLNFQQMVADLTGLAISNASLLDEATAAAEAMTLLQRTGKPASNVFYVADD 192          
The following BLAST results are available for this feature:
BLAST of EY650141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 343
Match NameE-valueIdentityDescription
GCSP_BURCC1.040e-3541.79Glycine dehydrogenase [decarboxylating] OS=Burkhol... [more]
GCSP_BURCA1.040e-3541.79Glycine dehydrogenase [decarboxylating] OS=Burkhol... [more]
GCSP_DICDI1.354e-3543.08Glycine dehydrogenase [decarboxylating], mitochond... [more]
GCSP1_PSEAE1.355e-3542.42Glycine dehydrogenase [decarboxylating] 1 OS=Pseud... [more]
GCSP_PSESM1.355e-3541.98Glycine dehydrogenase [decarboxylating] OS=Pseudom... [more]
GCSP_BURPP1.764e-3541.04Glycine dehydrogenase [decarboxylating] OS=Burkhol... [more]
GCSP_ALISL1.765e-3547.73Glycine dehydrogenase [decarboxylating] OS=Aliivib... [more]
GCSP_CHICK2.992e-3547.46Glycine dehydrogenase [decarboxylating], mitochond... [more]
GCSP_BURCM2.993e-3541.79Glycine dehydrogenase [decarboxylating] OS=Burkhol... [more]
GCSP_BURA42.993e-3541.79Glycine dehydrogenase [decarboxylating] OS=Burkhol... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-007-G02-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650141 ID=EY650141; Name=EY650141; organism=Citrus sinensis; type=EST; length=878bp
CCCACGCGTCCGGCTCAAGGGAGACTGGGGGGGGGGGGGAATTTCCAAAC
CATGATTGCAGATCTTACTGGATTGCCTATGTCAAACGCCTCATTGCTTG
ATGAGGGAACTGCTGCTGCTGAGGCAATGGCTATGTGCAATAACATACAG
AAGGGAAAGAAGAACACTTTTATTATTGCTAGCAACTGGGGGGGCGGCAG
ACAATTGATATTTGTATTACTAGAGCTGATGGTTTTGATATTAAAGGTGG
TGTTTCGGATCTTAAGGATATTGATTACAAGTCATGTGATGTTTGTGGGG
TTTTGGTTCACTATCCAGGTACTGAGGGTGAAGTTTTGGATTATGGGGAT
TTCATTAAGAATGCTCATGCTAATGGGGTTAATGGGTGTATGGCAACGGA
TTTGTTGGCATTGACAATTGTGAATCCTCCAGGTGAACTGGGGGCTGATA
TTGGGTGGGGCTCTGCTCATAGGTGTGGTGTGCCAAGGGGGTATGGAGGT
GCTCATGCAGCATTTGTGGGTACCGCTCAAGAGTACAGAAGGAGGATCGC
ATGGAGGATGGGGGGGGGTAACGTGGATTCGTCAGGGAAACCACGCCGGG
GGTGGGGGAATTGCAAACAAGGAGGAAGCTTTCCCGGAGGGGCGCGGGCG
ACCCGCGACCTCTGGCGCCGGGGAGGGCGTACTGGCGAGCGGGGCGGGCG
TGGGTGGCGGGTTATGACCGGGGCCGGAGGGGCGTAAAGCCAGTCTTCAG
AGAGGGGACGTGGTTTATCGGTACTTTCGCCCCTGGGGGAAAAAACGTGG
TGAGCGAGGAACGGCGGGGCGTGTACGTCATTAGACTGTGGAAGGGGGGG
GGGGCGGAGGGGGAGCCAGTGGAGGGGC
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