EY650141

Overview
NameEY650141
Unique NameEY650141
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650141 vs. ExPASy Swiss-Prot
Match: GCSP_VIBFM (Glycine dehydrogenase [decarboxylating] OS=Vibrio fischeri (strain MJ11) GN=gcvP PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.994e-35
Identity = 62/132 (46.97%), Postives = 81/132 (61.36%), Query Frame = 3
Query:  198 QTIDICITRAD--GFDIKGGVSDLKDIDYKSCDVCGVLVHYPGTEGEVLDYGDFIKNAHANGVNGCMATDLLALTIVNPPGELGADIGWGSAHRCGVPRGYGGAHAAFVGTAQEYRRRIAWRMGGGNVDSSG 587
            QT+ +  TRA   GFD+   V +  ++D  S DV G L+ YPGT GEV D  D I  AH       +ATDLLA  ++ P GE+GADI  GSA R GVP GYGG HAAF+ T ++ +R +  R+ G ++DS G
Sbjct:  181 QTLAVIKTRAKFIGFDVI--VDNESNLD--SHDVFGALLQYPGTTGEVKDLTDLIAQAHTKKTLVVVATDLLASVLLKPVGEMGADIAIGSAQRFGVPMGYGGPHAAFMATREKLKRSMPGRVIGVSIDSKG 308          

HSP 2 Score: 64.3142 bits (155), Expect = 2.994e-35
Identity = 32/58 (55.17%), Postives = 40/58 (68.97%), Query Frame = 1
Query:   13 AQGRLGGGGNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKNTFIIASN 186
            +QGRL    N+Q M+ DLTGL ++NASLLDE TAAAEAM +C    K K N F +A +
Sbjct:  120 SQGRLEALLNYQQMVMDLTGLEIANASLLDEATAAAEAMTLCKRGGKSKSNIFFVADD 177          
BLAST of EY650141 vs. ExPASy Swiss-Prot
Match: GCSP_VIBF1 (Glycine dehydrogenase [decarboxylating] OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=gcvP PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.899e-35
Identity = 62/132 (46.97%), Postives = 80/132 (60.61%), Query Frame = 3
Query:  198 QTIDICITRAD--GFDIKGGVSDLKDIDYKSCDVCGVLVHYPGTEGEVLDYGDFIKNAHANGVNGCMATDLLALTIVNPPGELGADIGWGSAHRCGVPRGYGGAHAAFVGTAQEYRRRIAWRMGGGNVDSSG 587
            QT+ +  TRA   GFD+   V    ++D  S DV G L+ YPGT GEV D  D I  AH       +ATDLLA  ++ P GE+GADI  GSA R GVP GYGG HAAF+ T ++ +R +  R+ G ++DS G
Sbjct:  181 QTLAVIKTRAKFIGFDVV--VDHESNLD--SHDVFGALLQYPGTTGEVKDLTDLIAQAHTKKTLVIVATDLLASVLLKPVGEMGADIAIGSAQRFGVPMGYGGPHAAFMATREKLKRSMPGRVIGVSIDSKG 308          

HSP 2 Score: 64.3142 bits (155), Expect = 3.899e-35
Identity = 32/58 (55.17%), Postives = 40/58 (68.97%), Query Frame = 1
Query:   13 AQGRLGGGGNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKNTFIIASN 186
            +QGRL    N+Q M+ DLTGL ++NASLLDE TAAAEAM +C    K K N F +A +
Sbjct:  120 SQGRLEALLNYQQMVMDLTGLEIANASLLDEATAAAEAMTLCKRGGKSKSNLFFVADD 177          
BLAST of EY650141 vs. ExPASy Swiss-Prot
Match: GCSP2_PSEF5 (Glycine dehydrogenase [decarboxylating] 2 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=gcvP2 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 5.079e-35
Identity = 57/134 (42.54%), Postives = 77/134 (57.46%), Query Frame = 3
Query:  198 QTIDICITRADGFDIK---GGVSDLKDIDYKSCDVCGVLVHYPGTEGEVLDYGDFIKNAHANGVNGCMATDLLALTIVNPPGELGADIGWGSAHRCGVPRGYGGAHAAFVGTAQEYRRRIAWRMGGGNVDSSGK 590
            QT+ +  TRA+GF  +   GGV +L         V G L+ YP T GE+ D    I   HA     C+A DLL+L ++ PPGELGAD+  GS+ R GVP GYGG HAAF     +Y+R +  R+ G + D+ G+
Sbjct:  180 QTVSVVRTRAEGFGFELVVGGVDELS-----GHQVFGALLQYPDTHGEIRDLRPLIDQLHAQQALACVAADLLSLLLLTPPGELGADVVLGSSQRFGVPMGYGGPHAAFFACRDDYKRAMPGRIIGVSKDARGQ 308          

HSP 2 Score: 63.1586 bits (152), Expect = 5.079e-35
Identity = 32/55 (58.18%), Postives = 37/55 (67.27%), Query Frame = 1
Query:   13 AQGRLGGGGNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKNTFII 177
            AQGRL    NFQ M  DLTGL ++NASLLDE TAAAEAMA+   + K   N F +
Sbjct:  119 AQGRLEALLNFQQMTIDLTGLDLANASLLDEATAAAEAMALAKRVSKSSSNLFFV 173          
BLAST of EY650141 vs. ExPASy Swiss-Prot
Match: GCSP_BURS3 (Glycine dehydrogenase [decarboxylating] OS=Burkholderia sp. (strain 383) GN=gcvP PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 6.614e-35
Identity = 55/134 (41.04%), Postives = 81/134 (60.45%), Query Frame = 3
Query:  198 QTIDICITRA--DGFDIKGGVSDLKDIDYKSCDVCGVLVHYPGTEGEVLDYGDFIKNAHANGVNGCMATDLLALTIVNPPGELGADIGWGSAHRCGVPRGYGGAHAAFVGTAQEYRRRIAWRMGGGNVDSSGKP 593
            QT+++  TRA   G ++K G +     D    +  GVL+ YPG  G+V DY    +  HA G +  +A DLLALT++ PPG+ GAD+  G+  R GVP G+GG HAA++    E++R++  R+ G  VD+ GKP
Sbjct:  196 QTLEVIRTRALPVGIEVKTGPA----ADAAQANAFGVLLQYPGVNGDVRDYRALTEAIHAAGGHVVVAADLLALTVLTPPGDWGADVAIGNTQRFGVPMGFGGPHAAYLAVRDEFKRQMPGRLVGVTVDAQGKP 325          

HSP 2 Score: 62.7734 bits (151), Expect = 6.614e-35
Identity = 33/58 (56.90%), Postives = 39/58 (67.24%), Query Frame = 1
Query:   13 AQGRLGGGGNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKNTFIIASN 186
            +QGRL    NFQ M+ADLTGL +SNASLLDE TAAAEAM +     K   N F +A +
Sbjct:  135 SQGRLEALLNFQQMVADLTGLAISNASLLDEATAAAEAMTLLQRTGKPTSNVFYVADD 192          
BLAST of EY650141 vs. ExPASy Swiss-Prot
Match: GCSP_SCHPO (Putative glycine dehydrogenase [decarboxylating], mitochondrial OS=Schizosaccharomyces pombe GN=SPAC13G6.06c PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 8.610e-35
Identity = 53/133 (39.85%), Postives = 75/133 (56.39%), Query Frame = 3
Query:  201 TIDICITRADGFDIKGGVSDLKD--IDYKSCDVCGVLVHYPGTEGEVLDYGDFIKNAHANGVNGCMATDLLALTIVNPPGELGADIGWGSAHRCGVPRGYGGAHAAFVGTAQEYRRRIAWRMGGGNVDSSGKP 593
            T+ +  TRA GF IK  + ++    I   +  V G+ V YP  +G + DYG     A +  ++   ATDLLALTI+  PGE GAD+  GS  R G+P GYGG HA F   ++E++R+I  R+ G + D    P
Sbjct:  229 TLSVLRTRASGFGIKIELDNITPELITKSAKHVFGIFVQYPAADGSIFDYGHLAATARSFNMHVVAATDLLALTILKSPGEWGADVAVGSTQRFGLPMGYGGPHAGFFACSEEFKRKIPGRLIGLSKDRLENP 361          

HSP 2 Score: 68.9366 bits (167), Expect = 8.610e-35
Identity = 36/58 (62.07%), Postives = 42/58 (72.41%), Query Frame = 1
Query:   13 AQGRLGGGGNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKNTFIIASN 186
            +QGRL    N+QTMIADLTGL +SNASLLDEGTAA EAM M     K K+ TF++  N
Sbjct:  167 SQGRLESMMNYQTMIADLTGLSISNASLLDEGTAAGEAMVMLMANDKKKRKTFLVDKN 224          
BLAST of EY650141 vs. ExPASy Swiss-Prot
Match: GCSP2_PSEPK (Glycine dehydrogenase [decarboxylating] 2 OS=Pseudomonas putida (strain KT2440) GN=gcvP2 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.616e-35
Identity = 54/130 (41.54%), Postives = 75/130 (57.69%), Query Frame = 3
Query:  198 QTIDICITRADGFDIKGGVSDLKDIDYKSCDVCGVLVHYPGTEGEVLDYGDFIKNAHANGVNGCMATDLLALTIVNPPGELGADIGWGSAHRCGVPRGYGGAHAAFVGTAQEYRRRIAWRMGGGNVDSSG 587
            QT+ +  TRA+GF  +  V  + ++   S  V G L+ YP T GEV D    I   H+     C+A DLL+L ++ PPGELGAD+  GS  R GVP GYGG HAA+     +Y+R +  R+ G + D+ G
Sbjct:  183 QTLSVLKTRAEGFGFELIVDSVDNLAKHS--VFGALLQYPDTHGEVRDLRPLIDQLHSQQALACVAADLLSLVVLAPPGELGADVVLGSTQRFGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRDARG 310          

HSP 2 Score: 67.3958 bits (163), Expect = 8.616e-35
Identity = 33/53 (62.26%), Postives = 39/53 (73.58%), Query Frame = 1
Query:   13 AQGRLGGGGNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKNTF 171
            AQGRL    NFQ M+ DLTGLP++NASLLDE TAAAEAMA+   + + K N F
Sbjct:  122 AQGRLEALLNFQQMVIDLTGLPLANASLLDEATAAAEAMALAKRVARNKSNAF 174          
BLAST of EY650141 vs. ExPASy Swiss-Prot
Match: GCSP_BURVG (Glycine dehydrogenase [decarboxylating] OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=gcvP PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.461e-34
Identity = 55/134 (41.04%), Postives = 79/134 (58.96%), Query Frame = 3
Query:  198 QTIDICITRA--DGFDIKGGVSDLKDIDYKSCDVCGVLVHYPGTEGEVLDYGDFIKNAHANGVNGCMATDLLALTIVNPPGELGADIGWGSAHRCGVPRGYGGAHAAFVGTAQEYRRRIAWRMGGGNVDSSGKP 593
            QT+++  TRA   G ++K G +     +       GVL+ YPG  G+V DY       HA G +  +A DLLALT++ PPGE GAD+  G+  R GVP G+GG HAA++    E++R++  R+ G  VD+ GKP
Sbjct:  196 QTLEVVRTRALPIGIEVKTGPA----AEAAQAGAFGVLLQYPGVNGDVRDYRALTDAIHAAGGHVVVAADLLALTVLTPPGEWGADVAVGNTQRFGVPMGFGGPHAAYMAVRDEFKRQMPGRLVGVTVDAQGKP 325          

HSP 2 Score: 63.5438 bits (153), Expect = 1.461e-34
Identity = 33/58 (56.90%), Postives = 39/58 (67.24%), Query Frame = 1
Query:   13 AQGRLGGGGNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKNTFIIASN 186
            +QGRL    NFQ M+ DLTGL +SNASLLDE TAAAEAM +     K K N F +A +
Sbjct:  135 SQGRLEALLNFQQMVVDLTGLAISNASLLDEATAAAEAMTLLQRTGKPKSNVFYVADD 192          
BLAST of EY650141 vs. ExPASy Swiss-Prot
Match: GCSP_BORA1 (Glycine dehydrogenase [decarboxylating] OS=Bordetella avium (strain 197N) GN=gcvP PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.462e-34
Identity = 57/133 (42.86%), Postives = 78/133 (58.65%), Query Frame = 3
Query:  198 QTIDICITRADGFDIKGGVSDLKDIDYKSCDVC-GVLVHYPGTEGEVLDYGDFIKNAHANGVNGCMATDLLALTIVNPPGELGADIGWGSAHRCGVPRGYGGAHAAFVGTAQEYRRRIAWRMGGGNVDSSGKP 593
            QTI++  TRA G DI   V D    + +    C GVL+ YP + G V++Y +  + AHA G     ATDLLAL ++ PPGE GADI  G+A R GVP G+GG HA F+     ++R +  R+ G + D+ G P
Sbjct:  178 QTIEVVRTRAQGLDIDVLVGD----ESQGLPECFGVLLQYPHSLGGVVNYRELAEAAHAQGAVVACATDLLALALLTPPGEWGADIAVGTAQRFGVPFGFGGPHAGFMACRDAFKRNMPGRLVGVSKDAQGNP 306          

HSP 2 Score: 65.855 bits (159), Expect = 1.462e-34
Identity = 33/58 (56.90%), Postives = 41/58 (70.69%), Query Frame = 1
Query:   13 AQGRLGGGGNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKNTFIIASN 186
            +QGRL    N+QTM+ADLTGL +SNASLLDEGTAAAEAM +     K K   F ++ +
Sbjct:  117 SQGRLEALLNYQTMVADLTGLDISNASLLDEGTAAAEAMTLARRSAKSKSAVFFVSQH 174          
BLAST of EY650141 vs. ExPASy Swiss-Prot
Match: GCSP_PSEU5 (Glycine dehydrogenase [decarboxylating] OS=Pseudomonas stutzeri (strain A1501) GN=gcvP PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.904e-34
Identity = 54/130 (41.54%), Postives = 76/130 (58.46%), Query Frame = 3
Query:  198 QTIDICITRADGFDIKGGVSDLKDIDYKSCDVCGVLVHYPGTEGEVLDYGDFIKNAHANGVNGCMATDLLALTIVNPPGELGADIGWGSAHRCGVPRGYGGAHAAFVGTAQEYRRRIAWRMGGGNVDSSG 587
            QT+ +  TRA+ F  +  V  L D+     +V G L+ YP T GE+ D    I+  HA     C+A DLL+L ++ PPGELGAD+  GS  R GVP GYGG HAA+  +  E++R +  R+ G + D+ G
Sbjct:  183 QTLSVVQTRAEAFGFELVVGTLDDL--AGHEVFGALLQYPDTHGEIRDLRPAIEQLHAQQALACVAADLLSLLLLTPPGELGADVVLGSTQRFGVPMGYGGPHAAYFASRDEFKRGMPGRIIGVSKDARG 310          

HSP 2 Score: 64.6994 bits (156), Expect = 1.904e-34
Identity = 33/58 (56.90%), Postives = 39/58 (67.24%), Query Frame = 1
Query:   13 AQGRLGGGGNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKNTFIIASN 186
            AQGRL    N+Q MI DLTGL ++NASLLDE TAAAEAM +   + K K N F +  N
Sbjct:  122 AQGRLEALLNYQQMIIDLTGLDLANASLLDEATAAAEAMTLARRMAKSKSNRFFVDEN 179          
BLAST of EY650141 vs. ExPASy Swiss-Prot
Match: GCSP_VIBCM (Glycine dehydrogenase [decarboxylating] OS=Vibrio cholerae serotype O1 (strain M66-2) GN=gcvP PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.480e-34
Identity = 59/132 (44.70%), Postives = 81/132 (61.36%), Query Frame = 3
Query:  198 QTIDICITRAD--GFDIKGGVSDLKDIDYKSCDVCGVLVHYPGTEGEVLDYGDFIKNAHANGVNGCMATDLLALTIVNPPGELGADIGWGSAHRCGVPRGYGGAHAAFVGTAQEYRRRIAWRMGGGNVDSSG 587
            QTI++  TRA   GF++K  V  + +I  +  +  G L+ YPGT GEV D  D I  A AN     +ATDLLA  ++ P GE+GAD+  GSA R GVP GYGG HAAF+ T   ++R +  R+ G ++D+ G
Sbjct:  181 QTIEVVKTRAAFLGFEVK--VDSIDNITQQ--EAFGALLQYPGTTGEVRDLTDIIAKAQANKTLVTVATDLLASVLLKPAGEMGADVVIGSAQRFGVPMGYGGPHAAFMATRDAHKRTMPGRVIGVSIDAKG 308          

HSP 2 Score: 63.929 bits (154), Expect = 2.480e-34
Identity = 31/58 (53.45%), Postives = 40/58 (68.97%), Query Frame = 1
Query:   13 AQGRLGGGGNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKNTFIIASN 186
            +QGRL    N+Q M+ DLT + ++NASLLDE TAAAEAMA+C    K K N F +A +
Sbjct:  120 SQGRLESLLNYQQMVMDLTAMEIANASLLDEATAAAEAMALCQRAGKSKSNLFFVADD 177          
The following BLAST results are available for this feature:
BLAST of EY650141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 343
Match NameE-valueIdentityDescription
GCSP_VIBFM2.994e-3546.97Glycine dehydrogenase [decarboxylating] OS=Vibrio ... [more]
GCSP_VIBF13.899e-3546.97Glycine dehydrogenase [decarboxylating] OS=Vibrio ... [more]
GCSP2_PSEF55.079e-3542.54Glycine dehydrogenase [decarboxylating] 2 OS=Pseud... [more]
GCSP_BURS36.614e-3541.04Glycine dehydrogenase [decarboxylating] OS=Burkhol... [more]
GCSP_SCHPO8.610e-3539.85Putative glycine dehydrogenase [decarboxylating], ... [more]
GCSP2_PSEPK8.616e-3541.54Glycine dehydrogenase [decarboxylating] 2 OS=Pseud... [more]
GCSP_BURVG1.461e-3441.04Glycine dehydrogenase [decarboxylating] OS=Burkhol... [more]
GCSP_BORA11.462e-3442.86Glycine dehydrogenase [decarboxylating] OS=Bordete... [more]
GCSP_PSEU51.904e-3441.54Glycine dehydrogenase [decarboxylating] OS=Pseudom... [more]
GCSP_VIBCM2.480e-3444.70Glycine dehydrogenase [decarboxylating] OS=Vibrio ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-007-G02-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650141 ID=EY650141; Name=EY650141; organism=Citrus sinensis; type=EST; length=878bp
CCCACGCGTCCGGCTCAAGGGAGACTGGGGGGGGGGGGGAATTTCCAAAC
CATGATTGCAGATCTTACTGGATTGCCTATGTCAAACGCCTCATTGCTTG
ATGAGGGAACTGCTGCTGCTGAGGCAATGGCTATGTGCAATAACATACAG
AAGGGAAAGAAGAACACTTTTATTATTGCTAGCAACTGGGGGGGCGGCAG
ACAATTGATATTTGTATTACTAGAGCTGATGGTTTTGATATTAAAGGTGG
TGTTTCGGATCTTAAGGATATTGATTACAAGTCATGTGATGTTTGTGGGG
TTTTGGTTCACTATCCAGGTACTGAGGGTGAAGTTTTGGATTATGGGGAT
TTCATTAAGAATGCTCATGCTAATGGGGTTAATGGGTGTATGGCAACGGA
TTTGTTGGCATTGACAATTGTGAATCCTCCAGGTGAACTGGGGGCTGATA
TTGGGTGGGGCTCTGCTCATAGGTGTGGTGTGCCAAGGGGGTATGGAGGT
GCTCATGCAGCATTTGTGGGTACCGCTCAAGAGTACAGAAGGAGGATCGC
ATGGAGGATGGGGGGGGGTAACGTGGATTCGTCAGGGAAACCACGCCGGG
GGTGGGGGAATTGCAAACAAGGAGGAAGCTTTCCCGGAGGGGCGCGGGCG
ACCCGCGACCTCTGGCGCCGGGGAGGGCGTACTGGCGAGCGGGGCGGGCG
TGGGTGGCGGGTTATGACCGGGGCCGGAGGGGCGTAAAGCCAGTCTTCAG
AGAGGGGACGTGGTTTATCGGTACTTTCGCCCCTGGGGGAAAAAACGTGG
TGAGCGAGGAACGGCGGGGCGTGTACGTCATTAGACTGTGGAAGGGGGGG
GGGGCGGAGGGGGAGCCAGTGGAGGGGC
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