EY650141

Overview
NameEY650141
Unique NameEY650141
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650141 vs. ExPASy Swiss-Prot
Match: GCSP_VIBC3 (Glycine dehydrogenase [decarboxylating] OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=gcvP PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.480e-34
Identity = 59/132 (44.70%), Postives = 81/132 (61.36%), Query Frame = 3
Query:  198 QTIDICITRAD--GFDIKGGVSDLKDIDYKSCDVCGVLVHYPGTEGEVLDYGDFIKNAHANGVNGCMATDLLALTIVNPPGELGADIGWGSAHRCGVPRGYGGAHAAFVGTAQEYRRRIAWRMGGGNVDSSG 587
            QTI++  TRA   GF++K  V  + +I  +  +  G L+ YPGT GEV D  D I  A AN     +ATDLLA  ++ P GE+GAD+  GSA R GVP GYGG HAAF+ T   ++R +  R+ G ++D+ G
Sbjct:  181 QTIEVVKTRAAFLGFEVK--VDSIDNITQQ--EAFGALLQYPGTTGEVRDLTDIIAKAQANKTLVTVATDLLASVLLKPAGEMGADVVIGSAQRFGVPMGYGGPHAAFMATRDAHKRTMPGRVIGVSIDAKG 308          

HSP 2 Score: 63.929 bits (154), Expect = 2.480e-34
Identity = 31/58 (53.45%), Postives = 40/58 (68.97%), Query Frame = 1
Query:   13 AQGRLGGGGNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKNTFIIASN 186
            +QGRL    N+Q M+ DLT + ++NASLLDE TAAAEAMA+C    K K N F +A +
Sbjct:  120 SQGRLESLLNYQQMVMDLTAMEIANASLLDEATAAAEAMALCQRAGKSKSNLFFVADD 177          
BLAST of EY650141 vs. ExPASy Swiss-Prot
Match: GCSP_AGRT5 (Glycine dehydrogenase [decarboxylating] OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=gcvP PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.480e-34
Identity = 54/131 (41.22%), Postives = 74/131 (56.49%), Query Frame = 3
Query:  198 QTIDICITRADGFDIKGGVSD-LKDIDYKSCDVCGVLVHYPGTEGEVLDYGDFIKNAHANGVNGCMATDLLALTIVNPPGELGADIGWGSAHRCGVPRGYGGAHAAFVGTAQEYRRRIAWRMGGGNVDSSG 587
            QTI +  TRA     K  + +   D+D    DV G +  YPGT G V D+   I   H  G    +A DLLALT++  PGE+GADI  G++ R GVP GYGG HAA++     ++R +  R+ G +VD+ G
Sbjct:  185 QTIALIETRAAPLGWKVIIGNPFTDLD--PVDVFGAIFQYPGTHGHVSDFTGLISRLHQTGAIAAVAADLLALTLLKSPGEMGADIAIGTSQRFGVPVGYGGPHAAYMSVKDAHKRSMPGRLVGVSVDARG 313          

HSP 2 Score: 70.4774 bits (171), Expect = 2.480e-34
Identity = 34/58 (58.62%), Postives = 42/58 (72.41%), Query Frame = 1
Query:   13 AQGRLGGGGNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKNTFIIASN 186
            +QGRL    N+QTM+ DLTGL ++NASLLDE TAAAEAMAMC  + K K   F + +N
Sbjct:  124 SQGRLEALLNYQTMVCDLTGLDVANASLLDEATAAAEAMAMCQRVAKSKATAFFVDAN 181          
BLAST of EY650141 vs. ExPASy Swiss-Prot
Match: GCSP_DINSH (Glycine dehydrogenase [decarboxylating] OS=Dinoroseobacter shibae (strain DFL 12) GN=gcvP PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.480e-34
Identity = 54/130 (41.54%), Postives = 74/130 (56.92%), Query Frame = 3
Query:  198 QTIDICITRADGFDIKGGVSDLKDIDYKSCDVCGVLVHYPGTEGEVLDYGDFIKNAHANGVNGCMATDLLALTIVNPPGELGADIGWGSAHRCGVPRGYGGAHAAFVGTAQEYRRRIAWRMGGGNVDSSG 587
            QTID+  TRA+   I+  V  +  +D ++  V   L  YPG+ G V DY D I+  H       +A D LALT++  PGE+GADI  GS  R GVP GYGG HAA++      +R +  R+ G +VD+ G
Sbjct:  181 QTIDVIRTRAEPLGIEVIVGAVDALDPEA--VFAALFQYPGSYGHVRDYSDVIEALHGARALAVVAADPLALTLLKSPGEMGADIAIGSTQRFGVPMGYGGPHAAYMTCTDALKRSMPGRIIGVSVDARG 308          

HSP 2 Score: 72.4034 bits (176), Expect = 2.480e-34
Identity = 37/58 (63.79%), Postives = 43/58 (74.14%), Query Frame = 1
Query:   13 AQGRLGGGGNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKNTFIIASN 186
            +QGRL    NFQTM+ADLTGLP++NASLLDEGTAAAEAMAM     K K   F +A +
Sbjct:  120 SQGRLEALLNFQTMMADLTGLPIANASLLDEGTAAAEAMAMAQRASKSKARGFFVAED 177          
BLAST of EY650141 vs. ExPASy Swiss-Prot
Match: GCSP_PHOPR (Glycine dehydrogenase [decarboxylating] OS=Photobacterium profundum GN=gcvP PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 3.229e-34
Identity = 56/130 (43.08%), Postives = 82/130 (63.08%), Query Frame = 3
Query:  198 QTIDICITRADGFDIKGGVSDLKDIDYKSCDVCGVLVHYPGTEGEVLDYGDFIKNAHANGVNGCMATDLLALTIVNPPGELGADIGWGSAHRCGVPRGYGGAHAAFVGTAQEYRRRIAWRMGGGNVDSSG 587
            QT+D+  TRA+   I+     ++++D  + DV G LV YPGT G + D  D I+ AHA      +A+DLLALT++  PGE+GAD+  GSA R GVP G+GG HA F+ T  +++R +  R+ G + D+ G
Sbjct:  183 QTVDVVRTRAEYIGIEIITGSVEELD--NHDVFGALVQYPGTTGSITDLTDIIEKAHAKKTLVAVASDLLALTLLKAPGEMGADVVIGSAQRFGVPMGFGGPHAGFMATKDKHKRTMPGRVIGVSKDARG 310          

HSP 2 Score: 59.3066 bits (142), Expect = 3.229e-34
Identity = 29/58 (50.00%), Postives = 39/58 (67.24%), Query Frame = 1
Query:   13 AQGRLGGGGNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKNTFIIASN 186
            +QGRL    N+Q MI DLT + ++NASLLDE TAAAEAM +C    K K   F ++++
Sbjct:  122 SQGRLESLLNYQQMIMDLTSMELANASLLDEATAAAEAMTLCLRAGKSKSKAFFVSND 179          
BLAST of EY650141 vs. ExPASy Swiss-Prot
Match: GCSP_BORPD (Glycine dehydrogenase [decarboxylating] OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=gcvP PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.229e-34
Identity = 57/133 (42.86%), Postives = 77/133 (57.89%), Query Frame = 3
Query:  198 QTIDICITRADGFDIKGGVSDLKDIDYKSCDVC-GVLVHYPGTEGEVLDYGDFIKNAHANGVNGCMATDLLALTIVNPPGELGADIGWGSAHRCGVPRGYGGAHAAFVGTAQEYRRRIAWRMGGGNVDSSGKP 593
            QTI++  TRA+G  I+  + D    + +    C GVL+ YP + G V DY    + AHA G     ATDLLAL ++ PPGE GADI  GS+ R GVP G+GG HA F+     Y+R +  R+ G + D+ G P
Sbjct:  178 QTIEVVRTRAEGLGIEVALGD----EAQGLPECFGVLLQYPHSLGGVADYRALAEAAHAQGAVVACATDLLALALMTPPGEWGADIAIGSSQRFGVPFGFGGPHAGFMACKDAYKRNMPGRLVGVSKDAQGNP 306          

HSP 2 Score: 64.3142 bits (155), Expect = 3.229e-34
Identity = 32/58 (55.17%), Postives = 41/58 (70.69%), Query Frame = 1
Query:   13 AQGRLGGGGNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKNTFIIASN 186
            +QGRL    N+QTM+ADLTGL +SNASLLDEGTAAAEAM +     K     F ++++
Sbjct:  117 SQGRLEALLNYQTMVADLTGLDISNASLLDEGTAAAEAMTLARRGSKSASQVFFVSAH 174          
BLAST of EY650141 vs. ExPASy Swiss-Prot
Match: GCSP_STRCO (Glycine dehydrogenase [decarboxylating] OS=Streptomyces coelicolor GN=gcvP PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 4.206e-34
Identity = 52/133 (39.10%), Postives = 77/133 (57.89%), Query Frame = 3
Query:  198 QTIDICITRADGFDIKGGVSDLKD---IDYKSCDVCGVLVHYPGTEGEVLDYGDFIKNAHANGVNGCMATDLLALTIVNPPGELGADIGWGSAHRCGVPRGYGGAHAAFVGTAQEYRRRIAWRMGGGNVDSSG 587
            QT+ +  TRA+   ++  V+DL +    +    ++ GVL+ YPG  G V D    I  AH  G    +A DLLALT++  PGELGADI  G+  R GVP G+GG HA ++   +++ R +  R+ G +VD+ G
Sbjct:  184 QTVAVIRTRAEPTGVEVVVADLSEGIPAEVAEREINGVLLQYPGASGAVRDIKPVIDRAHELGALVTVAADLLALTLLTSPGELGADIAVGTTQRFGVPMGFGGPHAGYMAVHEKFARSLPGRLVGVSVDADG 316          

HSP 2 Score: 69.707 bits (169), Expect = 4.206e-34
Identity = 35/55 (63.64%), Postives = 42/55 (76.36%), Query Frame = 1
Query:   13 AQGRLGGGGNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKNTFII 177
            +QGRL    NFQTM+A+LTGLP S ASLLDEGTAAAEAMA+   + K KK  F++
Sbjct:  123 SQGRLEALLNFQTMVAELTGLPTSGASLLDEGTAAAEAMALSRRMGKNKKGLFLV 177          
BLAST of EY650141 vs. ExPASy Swiss-Prot
Match: GCSP_VIBVU (Glycine dehydrogenase [decarboxylating] OS=Vibrio vulnificus GN=gcvP PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 4.206e-34
Identity = 59/132 (44.70%), Postives = 78/132 (59.09%), Query Frame = 3
Query:  198 QTIDICITRAD--GFDIKGGVSDLKDIDYKSCDVCGVLVHYPGTEGEVLDYGDFIKNAHANGVNGCMATDLLALTIVNPPGELGADIGWGSAHRCGVPRGYGGAHAAFVGTAQEYRRRIAWRMGGGNVDSSG 587
            QTI++  TRA   GFD+  G  D         +  G L+ YP T GEV D  D I  A AN     +ATDLLA  +V P GE+GAD+  GSA R GVP GYGG HAAF+ T ++++R +  R+ G ++D+ G
Sbjct:  181 QTIEVIKTRAKYFGFDVVIGNVD----SLPQTEAFGALLQYPSTTGEVRDLTDVITQAQANKTLVSVATDLLASALVKPAGEMGADVVIGSAQRFGVPMGYGGPHAAFMATREQHKRTMPGRVIGVSIDAKG 308          

HSP 2 Score: 62.7734 bits (151), Expect = 4.206e-34
Identity = 30/58 (51.72%), Postives = 39/58 (67.24%), Query Frame = 1
Query:   13 AQGRLGGGGNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKNTFIIASN 186
            +QGRL    N+Q M+ DLTG+ ++NASLLDE TAAAEAM +C    K K   F +A +
Sbjct:  120 SQGRLESLLNYQQMVMDLTGMDIANASLLDEATAAAEAMTLCQRAGKSKSKVFFVADD 177          
BLAST of EY650141 vs. ExPASy Swiss-Prot
Match: GCSP_STRAW (Glycine dehydrogenase [decarboxylating] OS=Streptomyces avermitilis GN=gcvP PE=3 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 5.478e-34
Identity = 52/133 (39.10%), Postives = 77/133 (57.89%), Query Frame = 3
Query:  198 QTIDICITRADGFDIKGGVSDLKD---IDYKSCDVCGVLVHYPGTEGEVLDYGDFIKNAHANGVNGCMATDLLALTIVNPPGELGADIGWGSAHRCGVPRGYGGAHAAFVGTAQEYRRRIAWRMGGGNVDSSG 587
            QTI +  TRA+   ++  V+DL +         ++ GVL+ YPG  G V D    ++ AH  G    +A DLLALT++  PGELGADI  G+  R GVP G+GG HA ++   +++ R +  R+ G +VD+ G
Sbjct:  184 QTIAVIETRAEPTGVEVVVADLSEGIPAGIAEREINGVLIQYPGASGAVRDIKPLVEQAHELGAVVTVAADLLALTLLTSPGELGADIAVGTTQRFGVPMGFGGPHAGYMAVREKFARSLPGRLVGVSVDADG 316          

HSP 2 Score: 68.1662 bits (165), Expect = 5.478e-34
Identity = 34/55 (61.82%), Postives = 42/55 (76.36%), Query Frame = 1
Query:   13 AQGRLGGGGNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKNTFII 177
            +QGRL    NFQT++A+LTGLP S ASLLDEGTAAAEAMA+   + K KK  F++
Sbjct:  123 SQGRLEALLNFQTVVAELTGLPTSGASLLDEGTAAAEAMALSRRMGKNKKGLFLV 177          
BLAST of EY650141 vs. ExPASy Swiss-Prot
Match: GCSP_VIBVY (Glycine dehydrogenase [decarboxylating] OS=Vibrio vulnificus (strain YJ016) GN=gcvP PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 5.478e-34
Identity = 59/132 (44.70%), Postives = 78/132 (59.09%), Query Frame = 3
Query:  198 QTIDICITRAD--GFDIKGGVSDLKDIDYKSCDVCGVLVHYPGTEGEVLDYGDFIKNAHANGVNGCMATDLLALTIVNPPGELGADIGWGSAHRCGVPRGYGGAHAAFVGTAQEYRRRIAWRMGGGNVDSSG 587
            QTI++  TRA   GFD+  G  D         +  G L+ YP T GEV D  D I  A AN     +ATDLLA  +V P GE+GAD+  GSA R GVP GYGG HAAF+ T ++++R +  R+ G ++D+ G
Sbjct:  181 QTIEVIKTRAKYFGFDVVIGNVDA----LPQTEAFGALLQYPSTTGEVRDLTDVIAQAQANKTLVSVATDLLASALVKPAGEMGADVVIGSAQRFGVPMGYGGPHAAFMATREQHKRTMPGRVIGVSIDAKG 308          

HSP 2 Score: 62.7734 bits (151), Expect = 5.478e-34
Identity = 30/58 (51.72%), Postives = 39/58 (67.24%), Query Frame = 1
Query:   13 AQGRLGGGGNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKNTFIIASN 186
            +QGRL    N+Q M+ DLTG+ ++NASLLDE TAAAEAM +C    K K   F +A +
Sbjct:  120 SQGRLESLLNYQQMVMDLTGMDIANASLLDEATAAAEAMTLCQRAGKSKSKVFFVADD 177          
BLAST of EY650141 vs. ExPASy Swiss-Prot
Match: GCSP_PSYIN (Glycine dehydrogenase [decarboxylating] OS=Psychromonas ingrahamii (strain 37) GN=gcvP PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.134e-34
Identity = 56/132 (42.42%), Postives = 83/132 (62.88%), Query Frame = 3
Query:  198 QTIDICITRADGFDIKGGVSDLKDIDYKSCDVCGVLVHYPGTEGEVLDYGDFIKNAHANGVNGCMATDLLALTIVNPPGELGADIGWGSAHRCGVPRGYGGAHAAFVGTAQEYRRRIAWRMGGGNVDSSGKP 593
            QT+D+  TRA+ F  +     ++D+D  + D+ G L+ YP T G + D    I+ AHA      +A+DLLALT++  PGE+GADI  GSA R G+P G+GG HA F+ T ++++R +  R+ G + DS GKP
Sbjct:  183 QTVDVVRTRAEFFGYEIISGSMEDLD--NHDLFGALLQYPSTTGNIQDLTAIIEKAHAKKTLVSVASDLLALTLLKAPGEMGADIVIGSAQRFGIPMGFGGPHAGFMATKEKFKRTMPGRIIGVSKDSKGKP 312          

HSP 2 Score: 57.7658 bits (138), Expect = 7.134e-34
Identity = 28/56 (50.00%), Postives = 37/56 (66.07%), Query Frame = 1
Query:   13 AQGRLGGGGNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKNTFIIA 180
            +QGRL    N+Q M+ DLT + ++NASLLDE TAAAE+M +C    K K   F +A
Sbjct:  122 SQGRLESLLNYQQMVMDLTAMEIANASLLDEATAAAESMTLCKRAGKSKSLAFFVA 177          
The following BLAST results are available for this feature:
BLAST of EY650141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 343
Match NameE-valueIdentityDescription
GCSP_VIBC32.480e-3444.70Glycine dehydrogenase [decarboxylating] OS=Vibrio ... [more]
GCSP_AGRT52.480e-3441.22Glycine dehydrogenase [decarboxylating] OS=Agrobac... [more]
GCSP_DINSH2.480e-3441.54Glycine dehydrogenase [decarboxylating] OS=Dinoros... [more]
GCSP_PHOPR3.229e-3443.08Glycine dehydrogenase [decarboxylating] OS=Photoba... [more]
GCSP_BORPD3.229e-3442.86Glycine dehydrogenase [decarboxylating] OS=Bordete... [more]
GCSP_STRCO4.206e-3439.10Glycine dehydrogenase [decarboxylating] OS=Strepto... [more]
GCSP_VIBVU4.206e-3444.70Glycine dehydrogenase [decarboxylating] OS=Vibrio ... [more]
GCSP_STRAW5.478e-3439.10Glycine dehydrogenase [decarboxylating] OS=Strepto... [more]
GCSP_VIBVY5.478e-3444.70Glycine dehydrogenase [decarboxylating] OS=Vibrio ... [more]
GCSP_PSYIN7.134e-3442.42Glycine dehydrogenase [decarboxylating] OS=Psychro... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-007-G02-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650141 ID=EY650141; Name=EY650141; organism=Citrus sinensis; type=EST; length=878bp
CCCACGCGTCCGGCTCAAGGGAGACTGGGGGGGGGGGGGAATTTCCAAAC
CATGATTGCAGATCTTACTGGATTGCCTATGTCAAACGCCTCATTGCTTG
ATGAGGGAACTGCTGCTGCTGAGGCAATGGCTATGTGCAATAACATACAG
AAGGGAAAGAAGAACACTTTTATTATTGCTAGCAACTGGGGGGGCGGCAG
ACAATTGATATTTGTATTACTAGAGCTGATGGTTTTGATATTAAAGGTGG
TGTTTCGGATCTTAAGGATATTGATTACAAGTCATGTGATGTTTGTGGGG
TTTTGGTTCACTATCCAGGTACTGAGGGTGAAGTTTTGGATTATGGGGAT
TTCATTAAGAATGCTCATGCTAATGGGGTTAATGGGTGTATGGCAACGGA
TTTGTTGGCATTGACAATTGTGAATCCTCCAGGTGAACTGGGGGCTGATA
TTGGGTGGGGCTCTGCTCATAGGTGTGGTGTGCCAAGGGGGTATGGAGGT
GCTCATGCAGCATTTGTGGGTACCGCTCAAGAGTACAGAAGGAGGATCGC
ATGGAGGATGGGGGGGGGTAACGTGGATTCGTCAGGGAAACCACGCCGGG
GGTGGGGGAATTGCAAACAAGGAGGAAGCTTTCCCGGAGGGGCGCGGGCG
ACCCGCGACCTCTGGCGCCGGGGAGGGCGTACTGGCGAGCGGGGCGGGCG
TGGGTGGCGGGTTATGACCGGGGCCGGAGGGGCGTAAAGCCAGTCTTCAG
AGAGGGGACGTGGTTTATCGGTACTTTCGCCCCTGGGGGAAAAAACGTGG
TGAGCGAGGAACGGCGGGGCGTGTACGTCATTAGACTGTGGAAGGGGGGG
GGGGCGGAGGGGGAGCCAGTGGAGGGGC
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