EY650141

Overview
NameEY650141
Unique NameEY650141
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650141 vs. ExPASy Swiss-Prot
Match: GCSP_MYCA1 (Glycine dehydrogenase [decarboxylating] OS=Mycobacterium avium (strain 104) GN=gcvP PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 9.294e-34
Identity = 49/132 (37.12%), Postives = 73/132 (55.30%), Query Frame = 3
Query:  198 QTIDICITRADGFDIKGGVSDLKDIDYKSCDVCGVLVHYPGTEGEVLDYGDFIKNAHANGVNGCMATDLLALTIVNPPGELGADIGWGSAHRCGVPRGYGGAHAAFVGTAQEYRRRIAWRMGGGNVDSSGKP 593
            QT  I  TRA    I+   +DL+D      D  GV+   PG  G + D+   +  AH  G    +  DLLALT++ PPGE+GAD+ +G+  R GVP G+GG HA ++     + R++  R+ G ++D+ G P
Sbjct:  182 QTAAIVATRARPLGIEIVTADLRD-GLPDGDFFGVIAQLPGASGAITDWAALVAQAHERGALVALGADLLALTLITPPGEIGADVAFGTTQRFGVPMGFGGPHAGYLAVHANHARQLPGRLVGVSLDADGSP 312          

HSP 2 Score: 66.2402 bits (160), Expect = 9.294e-34
Identity = 32/55 (58.18%), Postives = 41/55 (74.55%), Query Frame = 1
Query:   13 AQGRLGGGGNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKNTFII 177
            +QGRL    NFQTM+ADLTGL ++NAS+LDEGTAAAEAM + +   +GK N   +
Sbjct:  121 SQGRLEALLNFQTMVADLTGLEIANASMLDEGTAAAEAMTLMHRASRGKSNRLAV 175          
BLAST of EY650141 vs. ExPASy Swiss-Prot
Match: GCSP_PSEHT (Glycine dehydrogenase [decarboxylating] OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=gcvP PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.210e-33
Identity = 56/132 (42.42%), Postives = 76/132 (57.58%), Query Frame = 3
Query:  198 QTIDICITRAD--GFDIKGGVSDLKDIDYKSCDVCGVLVHYPGTEGEVLDYGDFIKNAHANGVNGCMATDLLALTIVNPPGELGADIGWGSAHRCGVPRGYGGAHAAFVGTAQEYRRRIAWRMGGGNVDSSG 587
            QTID+  TRA+  GF+I  G    K  D  + ++ G L  YP T GEV+D  D I    +     C+A D+++L ++  PG+LGAD+  GSA R GVP GYGG HAAF  T   Y+R +  R+ G + D  G
Sbjct:  184 QTIDVVSTRAEQFGFEIIVG----KAADAVNHEIFGALFQYPSTTGEVVDITDLIAGVQSKKAIACVAADIMSLLLLKAPGKLGADVVLGSAQRFGVPMGYGGPHAAFFATRDAYKRSLPGRIIGVSKDRLG 311          

HSP 2 Score: 63.929 bits (154), Expect = 1.210e-33
Identity = 35/59 (59.32%), Postives = 41/59 (69.49%), Query Frame = 1
Query:   13 AQGRLGGGGNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKK-NTFIIASN 186
            AQGRL    NFQTM  DLTGL +++ASLLDE TAAAEAM +   + K KK N F IA +
Sbjct:  122 AQGRLESLLNFQTMTLDLTGLDLASASLLDESTAAAEAMGLAKRVSKAKKANAFFIADD 180          
BLAST of EY650141 vs. ExPASy Swiss-Prot
Match: GCSP_MYCPA (Glycine dehydrogenase [decarboxylating] OS=Mycobacterium paratuberculosis GN=gcvP PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.210e-33
Identity = 49/132 (37.12%), Postives = 73/132 (55.30%), Query Frame = 3
Query:  198 QTIDICITRADGFDIKGGVSDLKDIDYKSCDVCGVLVHYPGTEGEVLDYGDFIKNAHANGVNGCMATDLLALTIVNPPGELGADIGWGSAHRCGVPRGYGGAHAAFVGTAQEYRRRIAWRMGGGNVDSSGKP 593
            QT  I  TRA    I+   +DL+D      D  GV+   PG  G + D+   +  AH  G    +  DLLALT++ PPGE+GAD+ +G+  R GVP G+GG HA ++     + R++  R+ G ++D+ G P
Sbjct:  182 QTAAIVATRARPLGIEIVTADLRD-GLPDGDFFGVIAQLPGASGAITDWAALVAQAHERGALVALGADLLALTLITPPGEIGADVAFGTTQRFGVPMGFGGPHAGYLAVHANHARQLPGRLVGVSLDADGSP 312          

HSP 2 Score: 65.855 bits (159), Expect = 1.210e-33
Identity = 32/55 (58.18%), Postives = 40/55 (72.73%), Query Frame = 1
Query:   13 AQGRLGGGGNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKNTFII 177
            +QGRL    NFQTM+ADLTGL ++NAS+LDEGTAAAEAM +     +GK N   +
Sbjct:  121 SQGRLEALLNFQTMVADLTGLEIANASMLDEGTAAAEAMTLMRRASRGKSNRLAV 175          
BLAST of EY650141 vs. ExPASy Swiss-Prot
Match: GCSP_RHOP5 (Glycine dehydrogenase [decarboxylating] OS=Rhodopseudomonas palustris (strain BisA53) GN=gcvP PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.576e-33
Identity = 60/136 (44.12%), Postives = 79/136 (58.09%), Query Frame = 3
Query:  198 QTIDICITRAD--GFDIKGG--VSDLKDIDYKSCDVCGVLVHYPGTEGEVLDYGDFIKNAHANGVNGCMATDLLALTIVNPPGELGADIGWGSAHRCGVPRGYGGAHAAFVGTAQEYRRRIAWRMGGGNVDSSGKP 593
            QT+ +  TRA+  G+ I  G  VSDL+       DV G L+ YPG+ G + D    I   HA G    +A DLLALT++  PG+LGADI  GSA R GVP GYGG HA F+      +R +  R+ G ++DS G+P
Sbjct:  182 QTLAVLRTRAEPLGWQIIVGDPVSDLQ-----KADVFGALLQYPGSSGALRDPRPMIAALHAKGGLAVIAADLLALTLLASPGDLGADIAIGSAQRFGVPMGYGGPHAGFMAVRDSLKRALPGRIVGQSIDSHGQP 312          

HSP 2 Score: 63.929 bits (154), Expect = 1.576e-33
Identity = 33/55 (60.00%), Postives = 38/55 (69.09%), Query Frame = 1
Query:   13 AQGRLGGGGNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKNTFII 177
            +QGRL    NFQTMI DLTGL ++NASLLDEGTAAAEAMA+       K   F +
Sbjct:  121 SQGRLEALFNFQTMICDLTGLDVANASLLDEGTAAAEAMALAERAMPKKTKAFFV 175          
BLAST of EY650141 vs. ExPASy Swiss-Prot
Match: GCSP_STRGG (Glycine dehydrogenase [decarboxylating] OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=gcvP PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.576e-33
Identity = 53/133 (39.85%), Postives = 75/133 (56.39%), Query Frame = 3
Query:  198 QTIDICITRADGFDIKGGVSDLKD---IDYKSCDVCGVLVHYPGTEGEVLDYGDFIKNAHANGVNGCMATDLLALTIVNPPGELGADIGWGSAHRCGVPRGYGGAHAAFVGTAQEYRRRIAWRMGGGNVDSSG 587
            QT+ +  TRA+   ++  V+DL D    +     V GVL+ YPG  G V      I+ AH  G    +A DLLALT++  PG LGADI  G+  R GVP G+GG HA F+   +++ R +  R+ G +VD+ G
Sbjct:  184 QTVAVIETRAEPTGVEVVVADLSDGIPAEIAERGVFGVLLQYPGASGAVRAIEPVIEQAHELGAIVTVAADLLALTLLTSPGALGADIAVGTTQRFGVPMGFGGPHAGFMAVREKFARSLPGRLVGVSVDADG 316          

HSP 2 Score: 69.707 bits (169), Expect = 1.576e-33
Identity = 35/55 (63.64%), Postives = 42/55 (76.36%), Query Frame = 1
Query:   13 AQGRLGGGGNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKNTFII 177
            +QGRL    NFQTM+A+LTGLP S ASLLDEGTAAAEAMA+   + K KK  F++
Sbjct:  123 SQGRLEALLNFQTMVAELTGLPTSGASLLDEGTAAAEAMALSRRVGKVKKGVFLV 177          
BLAST of EY650141 vs. ExPASy Swiss-Prot
Match: GCSP2_PSEAE (Glycine dehydrogenase [decarboxylating] 2 OS=Pseudomonas aeruginosa GN=gcvP2 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.576e-33
Identity = 55/132 (41.67%), Postives = 78/132 (59.09%), Query Frame = 3
Query:  198 QTIDICITRADGFDIKGGVSDLKDIDYKSCDVCGVLVHYPGTEGEVLDYGDFIKNAHANGVNGCMATDLLALTIVNPPGELGADIGWGSAHRCGVPRGYGGAHAAFVGTAQEYRRRIAWRMGGGNVDSSGKP 593
            QT+ +  TRA+ F  +  V +  ++   +  V G L+ YP + GE+ D    I+  H      C+A+DLLAL ++ PPGELGAD+  GSA R GVP GYGG HAAF  T + Y+R +  R+ G + D+ G P
Sbjct:  183 QTVSVLRTRAEAFGFELVVDEPDNLAAHA--VFGALLQYPDSRGEIRDLRPLIEALHGQQALACVASDLLALLLLTPPGELGADVVLGSAQRFGVPMGYGGPHAAFFATREGYKRAMPGRIIGVSRDARGNP 312          

HSP 2 Score: 60.4622 bits (145), Expect = 1.576e-33
Identity = 30/55 (54.55%), Postives = 38/55 (69.09%), Query Frame = 1
Query:   13 AQGRLGGGGNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKNTFII 177
            AQGRL    NFQ +  DLTGL +++ASLLDE TAAAEAMA+   + K + N F +
Sbjct:  122 AQGRLEALLNFQQLTIDLTGLDLASASLLDEATAAAEAMALARRVAKARSNRFFV 176          
BLAST of EY650141 vs. ExPASy Swiss-Prot
Match: GCSP_BORPE (Glycine dehydrogenase [decarboxylating] OS=Bordetella pertussis GN=gcvP PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.576e-33
Identity = 55/133 (41.35%), Postives = 77/133 (57.89%), Query Frame = 3
Query:  198 QTIDICITRADGFDIKGGVSDLKDIDYKSCDVC-GVLVHYPGTEGEVLDYGDFIKNAHANGVNGCMATDLLALTIVNPPGELGADIGWGSAHRCGVPRGYGGAHAAFVGTAQEYRRRIAWRMGGGNVDSSGKP 593
            QT+++  TRA+G  I+  + D    + +    C GVL+ YP + G V DY +  + AHA G      TDLLAL ++ PPG+ GADI  GSA R GVP G+GG HA F+     Y+R +  R+ G + D+ G P
Sbjct:  178 QTLEVVRTRAEGLGIELVIGD----ESRGLPECFGVLLQYPHSLGGVADYRELAQAAHAQGAVVACVTDLLALALIEPPGQWGADIAVGSAQRFGVPFGFGGPHAGFMACRDAYKRNMPGRLVGVSKDAQGNP 306          

HSP 2 Score: 62.3882 bits (150), Expect = 1.576e-33
Identity = 31/58 (53.45%), Postives = 40/58 (68.97%), Query Frame = 1
Query:   13 AQGRLGGGGNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKNTFIIASN 186
            +QGRL    N+QTM+ADLTGL +SNASLLDEGTAAAEAM +     +     F ++ +
Sbjct:  117 SQGRLEALLNYQTMVADLTGLDISNASLLDEGTAAAEAMTLARRGSRSSSPVFFVSQH 174          
BLAST of EY650141 vs. ExPASy Swiss-Prot
Match: GCSP_BORPA (Glycine dehydrogenase [decarboxylating] OS=Bordetella parapertussis GN=gcvP PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.576e-33
Identity = 55/133 (41.35%), Postives = 77/133 (57.89%), Query Frame = 3
Query:  198 QTIDICITRADGFDIKGGVSDLKDIDYKSCDVC-GVLVHYPGTEGEVLDYGDFIKNAHANGVNGCMATDLLALTIVNPPGELGADIGWGSAHRCGVPRGYGGAHAAFVGTAQEYRRRIAWRMGGGNVDSSGKP 593
            QT+++  TRA+G  I+  + D    + +    C GVL+ YP + G V DY +  + AHA G      TDLLAL ++ PPG+ GADI  GSA R GVP G+GG HA F+     Y+R +  R+ G + D+ G P
Sbjct:  178 QTLEVVRTRAEGLGIELVIGD----ESRGLPECFGVLLQYPHSLGGVADYRELAQAAHAQGAVVACVTDLLALALIEPPGQWGADIAVGSAQRFGVPFGFGGPHAGFMACRDAYKRNMPGRLVGVSKDAQGNP 306          

HSP 2 Score: 62.3882 bits (150), Expect = 1.576e-33
Identity = 31/58 (53.45%), Postives = 40/58 (68.97%), Query Frame = 1
Query:   13 AQGRLGGGGNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKNTFIIASN 186
            +QGRL    N+QTM+ADLTGL +SNASLLDEGTAAAEAM +     +     F ++ +
Sbjct:  117 SQGRLEALLNYQTMVADLTGLDISNASLLDEGTAAAEAMTLARRGSRSSSPVFFVSQH 174          
BLAST of EY650141 vs. ExPASy Swiss-Prot
Match: GCSP_BORBR (Glycine dehydrogenase [decarboxylating] OS=Bordetella bronchiseptica GN=gcvP PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.576e-33
Identity = 55/133 (41.35%), Postives = 77/133 (57.89%), Query Frame = 3
Query:  198 QTIDICITRADGFDIKGGVSDLKDIDYKSCDVC-GVLVHYPGTEGEVLDYGDFIKNAHANGVNGCMATDLLALTIVNPPGELGADIGWGSAHRCGVPRGYGGAHAAFVGTAQEYRRRIAWRMGGGNVDSSGKP 593
            QT+++  TRA+G  I+  + D    + +    C GVL+ YP + G V DY +  + AHA G      TDLLAL ++ PPG+ GADI  GSA R GVP G+GG HA F+     Y+R +  R+ G + D+ G P
Sbjct:  178 QTLEVVRTRAEGLGIELVIGD----ESRGLPECFGVLLQYPHSLGGVADYRELAQAAHAQGAVVACVTDLLALALIEPPGQWGADIAVGSAQRFGVPFGFGGPHAGFMSCRDAYKRNMPGRLVGVSKDAQGNP 306          

HSP 2 Score: 62.3882 bits (150), Expect = 1.576e-33
Identity = 31/58 (53.45%), Postives = 40/58 (68.97%), Query Frame = 1
Query:   13 AQGRLGGGGNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKNTFIIASN 186
            +QGRL    N+QTM+ADLTGL +SNASLLDEGTAAAEAM +     +     F ++ +
Sbjct:  117 SQGRLEALLNYQTMVADLTGLDISNASLLDEGTAAAEAMTLARRGSRSSSPVFFVSQH 174          
BLAST of EY650141 vs. ExPASy Swiss-Prot
Match: GCSP_PELUB (Glycine dehydrogenase [decarboxylating] OS=Pelagibacter ubique GN=gcvP PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.673e-33
Identity = 58/131 (44.27%), Postives = 77/131 (58.78%), Query Frame = 3
Query:  198 QTIDICITRADGFDIKGGVSDLKDIDYKSCDVCGVLVHYPGTEGEVLDYGDFIKNAHANGVNGCMATDLLALTIVNPPGELGADIGWGSAHRCGVPRGYGGAHAAFVGTAQEYRRRIAWRMGGGNVDSSGK 590
            QTID+  TRA+   ++  V D +D D K   +CG+ + YPGT G++ D  + I   H       +A DLLAL  +  P ELGADI  GS+ R G+P GYGG HAAF  T  EY+R +  R+ G +VD  GK
Sbjct:  176 QTIDVIKTRAEPLGLEIIVGD-EDKDIKEDIICGI-IQYPGTLGDIKDPSEAISKIHKFNGKAVLACDLLALAKLKTPAELGADIAVGSSQRFGIPMGYGGPHAAFFATKDEYKRSMPGRIVGVSVDRHGK 304          

HSP 2 Score: 59.3066 bits (142), Expect = 2.673e-33
Identity = 31/58 (53.45%), Postives = 38/58 (65.52%), Query Frame = 1
Query:   13 AQGRLGGGGNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKNTFIIASN 186
            AQGRL    NFQ MI D TG+ ++NASLLDEGTAAAEAM +   I K +     ++ N
Sbjct:  115 AQGRLEMLLNFQQMIIDFTGMDIANASLLDEGTAAAEAMGLSYRISKSESKKVFVSKN 172          
The following BLAST results are available for this feature:
BLAST of EY650141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 343
Match NameE-valueIdentityDescription
GCSP_MYCA19.294e-3437.12Glycine dehydrogenase [decarboxylating] OS=Mycobac... [more]
GCSP_PSEHT1.210e-3342.42Glycine dehydrogenase [decarboxylating] OS=Pseudoa... [more]
GCSP_MYCPA1.210e-3337.12Glycine dehydrogenase [decarboxylating] OS=Mycobac... [more]
GCSP_RHOP51.576e-3344.12Glycine dehydrogenase [decarboxylating] OS=Rhodops... [more]
GCSP_STRGG1.576e-3339.85Glycine dehydrogenase [decarboxylating] OS=Strepto... [more]
GCSP2_PSEAE1.576e-3341.67Glycine dehydrogenase [decarboxylating] 2 OS=Pseud... [more]
GCSP_BORPE1.576e-3341.35Glycine dehydrogenase [decarboxylating] OS=Bordete... [more]
GCSP_BORPA1.576e-3341.35Glycine dehydrogenase [decarboxylating] OS=Bordete... [more]
GCSP_BORBR1.576e-3341.35Glycine dehydrogenase [decarboxylating] OS=Bordete... [more]
GCSP_PELUB2.673e-3344.27Glycine dehydrogenase [decarboxylating] OS=Pelagib... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-007-G02-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650141 ID=EY650141; Name=EY650141; organism=Citrus sinensis; type=EST; length=878bp
CCCACGCGTCCGGCTCAAGGGAGACTGGGGGGGGGGGGGAATTTCCAAAC
CATGATTGCAGATCTTACTGGATTGCCTATGTCAAACGCCTCATTGCTTG
ATGAGGGAACTGCTGCTGCTGAGGCAATGGCTATGTGCAATAACATACAG
AAGGGAAAGAAGAACACTTTTATTATTGCTAGCAACTGGGGGGGCGGCAG
ACAATTGATATTTGTATTACTAGAGCTGATGGTTTTGATATTAAAGGTGG
TGTTTCGGATCTTAAGGATATTGATTACAAGTCATGTGATGTTTGTGGGG
TTTTGGTTCACTATCCAGGTACTGAGGGTGAAGTTTTGGATTATGGGGAT
TTCATTAAGAATGCTCATGCTAATGGGGTTAATGGGTGTATGGCAACGGA
TTTGTTGGCATTGACAATTGTGAATCCTCCAGGTGAACTGGGGGCTGATA
TTGGGTGGGGCTCTGCTCATAGGTGTGGTGTGCCAAGGGGGTATGGAGGT
GCTCATGCAGCATTTGTGGGTACCGCTCAAGAGTACAGAAGGAGGATCGC
ATGGAGGATGGGGGGGGGTAACGTGGATTCGTCAGGGAAACCACGCCGGG
GGTGGGGGAATTGCAAACAAGGAGGAAGCTTTCCCGGAGGGGCGCGGGCG
ACCCGCGACCTCTGGCGCCGGGGAGGGCGTACTGGCGAGCGGGGCGGGCG
TGGGTGGCGGGTTATGACCGGGGCCGGAGGGGCGTAAAGCCAGTCTTCAG
AGAGGGGACGTGGTTTATCGGTACTTTCGCCCCTGGGGGAAAAAACGTGG
TGAGCGAGGAACGGCGGGGCGTGTACGTCATTAGACTGTGGAAGGGGGGG
GGGGCGGAGGGGGAGCCAGTGGAGGGGC
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