EY650127

Overview
NameEY650127
Unique NameEY650127
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650127 vs. ExPASy Swiss-Prot
Match: DCAM_VICFA (S-adenosylmethionine decarboxylase proenzyme OS=Vicia faba GN=SAMDC PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.057e-25
Identity = 67/120 (55.83%), Postives = 80/120 (66.67%), Query Frame = 3
Query:  507 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEHLDSYVLSDQASVCTLTKLLSKLVGLPSCFFH-PCILK*L-SPSRVCSICEYTRGSLYLLG 860
            + VSAIGFEG+EKRLE+SF +PG+F+DP GRGLRSL+K QLDEIL PAECTIVSSL+NE +DSYVLS+ +      K++ K  G        P ILK   S S       YTRGS    G
Sbjct:    1 MAVSAIGFEGFEKRLEISFSDPGLFSDPQGRGLRSLTKSQLDEILAPAECTIVSSLANEDVDSYVLSESSLFVYAYKIIIKTCGTTKLLLAIPPILKLAESISLDVRAVRYTRGSFIFPG 120          
BLAST of EY650127 vs. ExPASy Swiss-Prot
Match: DCAM1_DIACA (S-adenosylmethionine decarboxylase proenzyme 1 OS=Dianthus caryophyllus GN=SAMDC1 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.278e-24
Identity = 61/120 (50.83%), Postives = 77/120 (64.17%), Query Frame = 3
Query:  507 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEHLDSYVLSDQASVCTLTKLLSKLVGLPSCFFHPCILK*LSPSRVCSI--CEYTRGSLYLLG 860
            + +SAIGFEG+EKRLE+SFFEPG+F DP G+GLR+LSK QLDEIL PAECTIV SL+NE +DSYVLS+ +      K++ K  G          +  L+      +    YTRGS    G
Sbjct:   25 MALSAIGFEGFEKRLEISFFEPGIFVDPEGKGLRALSKAQLDEILGPAECTIVDSLANESVDSYVLSESSLFVYSYKIIIKTCGTTKLLHSILPILTLADGLCLDVKSVRYTRGSFIFPG 144          
BLAST of EY650127 vs. ExPASy Swiss-Prot
Match: DCAM2_DIACA (S-adenosylmethionine decarboxylase proenzyme 2 OS=Dianthus caryophyllus GN=SAMDC2 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.303e-24
Identity = 63/121 (52.07%), Postives = 80/121 (66.12%), Query Frame = 3
Query:  507 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEHLDSYVLSDQASVCTLTKLLSKLVGLPSCFFH-PCILK*LSPSRVCSI--CEYTRGSLYLLG 860
            + +SAIGFEG+EKRLE+SFFEPG+F DP G+GLR+LSK  LDEIL PAECTIV SL+NE +DSYVLS+ +      K++ K  G        P IL+ L+ +    +    YTRGS    G
Sbjct:   16 MTISAIGFEGFEKRLEISFFEPGIFVDPEGKGLRALSKAHLDEILGPAECTIVDSLANESVDSYVLSESSLFVYSYKIIIKTCGTTKLLNSIPPILR-LAETLFLDVKSVRYTRGSFIFPG 135          
BLAST of EY650127 vs. ExPASy Swiss-Prot
Match: DCAM2_BRAJU (S-adenosylmethionine decarboxylase proenzyme 2 OS=Brassica juncea GN=SAMDC2 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 9.538e-24
Identity = 66/122 (54.10%), Postives = 77/122 (63.11%), Query Frame = 3
Query:  507 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEHLDSYVLSDQASVCTLTKLLSKLVG----LPSCFFHPCILK*LSPSRVCSICEYTRGSLYLLG 860
            + VSAIGFEGYEKRLEVSFFEP +F D  G+GLR+L K Q+DEIL PAECTIVSSLSN+ LDSYVLS+ +      K++ K  G    LPS    P +      S       YTRGS    G
Sbjct:    1 MSVSAIGFEGYEKRLEVSFFEPSLFVDTHGKGLRALPKSQIDEILAPAECTIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCGTTKLLPS--IEPLLRLAGELSLEVKSVRYTRGSFLCPG 120          
BLAST of EY650127 vs. ExPASy Swiss-Prot
Match: DCAM2_ARATH (S-adenosylmethionine decarboxylase proenzyme 2 OS=Arabidopsis thaliana GN=SAMDC2 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.246e-23
Identity = 62/120 (51.67%), Postives = 77/120 (64.17%), Query Frame = 3
Query:  507 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEHLDSYVLSDQASVCTLTKLLSKLVGLPSCF--FHPCILK*LSPSRVCSICEYTRGSLYLLG 860
            + +SAIGFEGYEKRLEV+FFEPG+F D  G+GLR+L+K Q+DEIL+PAECTIVSSLSN+ LDSYVLS+ +      K++ K  G         P +      S       YTRGS    G
Sbjct:    1 MAMSAIGFEGYEKRLEVTFFEPGLFLDTQGKGLRALAKSQIDEILQPAECTIVSSLSNDQLDSYVLSESSLFIFPYKIVIKTCGTTKLLLSIEPLLRLAGELSLDVKAVRYTRGSFLCPG 120          
BLAST of EY650127 vs. ExPASy Swiss-Prot
Match: DCAM_SPIOL (S-adenosylmethionine decarboxylase proenzyme OS=Spinacia oleracea GN=SAMDC PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.055e-22
Identity = 51/84 (60.71%), Postives = 65/84 (77.38%), Query Frame = 3
Query:  507 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEHLDSYVLSDQASVCTLTKLLSKLVG 758
            + +SAIGFEG+EKRLE++FFEP +F DP G+GLR+L K QLDEIL PAECTIV SL+NE +DSYVLS+ +      K++ K  G
Sbjct:    1 MAISAIGFEGFEKRLEITFFEPSIFVDPEGKGLRALCKAQLDEILGPAECTIVDSLANESVDSYVLSESSLFIYAYKIIIKTCG 84          
BLAST of EY650127 vs. ExPASy Swiss-Prot
Match: DCAM1_ARATH (S-adenosylmethionine decarboxylase proenzyme 1 OS=Arabidopsis thaliana GN=SAMDC1 PE=2 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 1.055e-22
Identity = 64/121 (52.89%), Postives = 79/121 (65.29%), Query Frame = 3
Query:  507 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEHLDSYVLSDQASVCTLTKLLSKLVGLPSCFFH-PCILK*LSPSRVCSI--CEYTRGSLYLLG 860
            + +SAIGFEGYEKRLEV+FFEP +F D  G GLR+L+K QLDEIL PA CTIVSSLSN+ LDSYVLS+ +      K++ K  G        P +LK L+     S+   +YTRGS    G
Sbjct:    1 MALSAIGFEGYEKRLEVTFFEPSIFQDSKGLGLRALTKSQLDEILTPAACTIVSSLSNDQLDSYVLSESSFFVYPYKVIIKTCGTTKLLLSIPPLLK-LAGELSLSVKSVKYTRGSFLCPG 120          
BLAST of EY650127 vs. ExPASy Swiss-Prot
Match: DCAM3_BRAJU (S-adenosylmethionine decarboxylase proenzyme 3 OS=Brassica juncea GN=SAMDC3 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.799e-22
Identity = 64/121 (52.89%), Postives = 78/121 (64.46%), Query Frame = 3
Query:  507 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEHLDSYVLSDQASVCTLTKLLSKLVGLPSCFFH-PCILK*LSPSRVCSI--CEYTRGSLYLLG 860
            + +SAIGFEGYEKRLEVSFFEP  F D  G GLR+L++ QLDEIL PA C IVSSLSN+HLDSYVLS+ +      K++ K  G        P +LK L+     S+   +YTRGS    G
Sbjct:    1 MALSAIGFEGYEKRLEVSFFEPSFFQDSKGLGLRALTRSQLDEILTPAACEIVSSLSNDHLDSYVLSESSFFVYPYKVIIKTCGTTKLLLSIPPLLK-LAGELSLSVKSVKYTRGSFLCPG 120          
BLAST of EY650127 vs. ExPASy Swiss-Prot
Match: DCAM_HELAN (S-adenosylmethionine decarboxylase proenzyme OS=Helianthus annuus GN=SAMDC PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.927e-22
Identity = 64/118 (54.24%), Postives = 75/118 (63.56%), Query Frame = 3
Query:  516 SAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEHLDSYVLSDQASVCTLTKLLSKLVGLPSCFFH-PCILK*LSP--SRVCSICEYTRGSLYLLG 860
            SAIGFEG+EKRLE+SFF PG   DP  RGLRSL+K+QLD+ L PAECTIVSSLSN+ LDSYVLS+ +      K++ K  G        P IL+ LS   S       YTRGS    G
Sbjct:    3 SAIGFEGFEKRLEISFFNPGPSVDPVARGLRSLTKNQLDKFLAPAECTIVSSLSNDLLDSYVLSESSLFVYPYKIIIKTCGTTKLLLSIPHILE-LSGELSLTVQSVRYTRGSFIFPG 119          
BLAST of EY650127 vs. ExPASy Swiss-Prot
Match: DCAM1_BRAJU (S-adenosylmethionine decarboxylase proenzyme 1 OS=Brassica juncea GN=SAMDC1 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.166e-21
Identity = 60/120 (50.00%), Postives = 73/120 (60.83%), Query Frame = 3
Query:  507 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEHLDSYVLSDQASVCTLTKLLSKLVGLPSCF--FHPCILK*LSPSRVCSICEYTRGSLYLLG 860
            + +SAIGFEG  +RLEVSFFEP +F D  G+GLR+LSK Q+DEIL PAECTIVSSLSN+ LDSYVLS+ +      K++ K  G         P +      S       YTRGS    G
Sbjct:    1 MSLSAIGFEGLRERLEVSFFEPSLFLDTHGKGLRALSKSQIDEILAPAECTIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCGTTKLLLSIEPLLRLAGGVSLEVKSVRYTRGSFLCPG 120          
The following BLAST results are available for this feature:
BLAST of EY650127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
DCAM_VICFA5.057e-2555.83S-adenosylmethionine decarboxylase proenzyme OS=Vi... [more]
DCAM1_DIACA3.278e-2450.83S-adenosylmethionine decarboxylase proenzyme 1 OS=... [more]
DCAM2_DIACA7.303e-2452.07S-adenosylmethionine decarboxylase proenzyme 2 OS=... [more]
DCAM2_BRAJU9.538e-2454.10S-adenosylmethionine decarboxylase proenzyme 2 OS=... [more]
DCAM2_ARATH1.246e-2351.67S-adenosylmethionine decarboxylase proenzyme 2 OS=... [more]
DCAM_SPIOL1.055e-2260.71S-adenosylmethionine decarboxylase proenzyme OS=Sp... [more]
DCAM1_ARATH1.055e-2252.89S-adenosylmethionine decarboxylase proenzyme 1 OS=... [more]
DCAM3_BRAJU1.799e-2252.89S-adenosylmethionine decarboxylase proenzyme 3 OS=... [more]
DCAM_HELAN8.927e-2254.24S-adenosylmethionine decarboxylase proenzyme OS=He... [more]
DCAM1_BRAJU1.166e-2150.00S-adenosylmethionine decarboxylase proenzyme 1 OS=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-100-007-E09-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650127 ID=EY650127; Name=EY650127; organism=Citrus sinensis; type=EST; length=873bp
CGGAAGGAGATCGAAATTCGTTTTGTGAGGCAGAGTGAAAAATCAACCCT
TCTTTAATCCTCAAGGAATTTTATTATTTTCTTGGTCTCTGAATCGAGGG
TTTTGCTTCTTGGTTTAGTGGGTTTGTTTTCGTTATATTATCTGAGCAAG
GCTGAATGATCTAATGGAGTCAAAAGGTGGTAAGAAGAAGTCTAGCAGTA
GTTCCTTATTCTACGAAGCTCCTCTTGGTTACAGCATTGAAGACGTTCGA
CCTCACGGTGGCATAAAGAAGTTCAGATCAGCTGCATACTCAAACTGCGT
CCGCAAACCATCCTGAGATCGTCCAATTTGTCCCATACCCCCCCAAAAAA
AAGCTCACTACTACTGCAATTTTAATTTTTTTTAGTTTTAGCCGTCTTAA
TACTGCAATTTACTTGGCCTATTTCTTTTTCGACTTCCCTCGTTCTCTCG
TTCTGCCCTCTTTGCTCTTTGCAATTGTCATTTGTTTTCTGTAAGGCAAG
ATGGCCTTGCCAGTCTCTGCAATTGGATTTGAAGGTTATGAAAAGAGGCT
TGAAGTTTCCTTTTTTGAGCCTGGTGTCTTTGCTGATCCTGGAGGTAGGG
GCCTCCGCTCTCTGTCAAAACATCAATTGGATGAAATACTGAAACCTGCG
GAATGCACAATTGTTTCTTCGTTGTCAAATGAACATCTTGATTCATATGT
CCTCTCAGATCAAGCCTCTGTGTGTACCCTTACAAAGTTATTATCAAAAC
TTGTGGGACTACCAAGCTGCTTCTTTCATCCCTGCATCCTCAAGTAGCTG
AGTCCCTCTCGTGTCTGTTCGATCTGTGAATACACTCGTGGAAGCTTATA
TTTGCTGGGGCTCACCATTTNCC
back to top