EY650120
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY650120 vs. ExPASy Swiss-Prot
Match: DXS_PSEPF (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas fluorescens (strain Pf0-1) GN=dxs PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.923e-13 Identity = 49/124 (39.52%), Postives = 66/124 (53.23%), Query Frame = 3 Query: 537 EYHSRRPPTPLLDTINYPIHMRNLSIRELKQLADELRSDVIFNVSKTGGHLGSTLGVIELTVAF-IMLSCSKDRIXEDVXHHTTLIK-SDWEKGXMRTMMQH--MASLITKGLKWIDXFGPGQS 896 E +RP TPLLD N P +R L EL+ LADELR ++++ V +TGGH G+ LGVIELT+A + DR+ DV H K + M T+ Q +A+ + D FG G S Sbjct: 7 EIPRKRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMETLRQKDGIAAFPRRSESEYDTFGVGHS 130
BLAST of EY650120 vs. ExPASy Swiss-Prot
Match: DXS_PSEFS (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas fluorescens (strain SBW25) GN=dxs PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.923e-13 Identity = 48/125 (38.40%), Postives = 66/125 (52.80%), Query Frame = 3 Query: 537 EYHSRRPPTPLLDTINYPIHMRNLSIRELKQLADELRSDVIFNVSKTGGHLGSTLGVIELTVAF-IMLSCSKDRIXEDVXH----HTTLIKSDWEKGXMRTMMQHMASLITKGLKWIDXFGPGQS 896 E +RP TPLLD P+ +R L EL+ LADELR ++++ V +TGGH G+ LGVIELT+A + DR+ DV H H L + G +R +A+ + D FG G S Sbjct: 7 EIPRKRPSTPLLDRAVTPVGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIALHYVFDTPDDRLVWDVGHQAYPHKILTGRREQMGTLR-QKDGIAAFPRRAESEYDTFGVGHS 130
BLAST of EY650120 vs. ExPASy Swiss-Prot
Match: DXS_RHIEC (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=dxs PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.035e-12 Identity = 38/75 (50.67%), Postives = 50/75 (66.67%), Query Frame = 3 Query: 555 PPTPLLDTINYPIHMRNLSIRELKQLADELRSDVIFNVSKTGGHLGSTLGVIELTVAF-IMLSCSKDRIXEDVXH 776 P TPLLD + YP +R L R+L QLA E+R ++I VS+TGGHLG+ LGV+ELT+A + DR+ DV H Sbjct: 5 PKTPLLDQVTYPADLRKLEDRDLPQLAREVRDEMIDAVSRTGGHLGAGLGVVELTIAIHSVFDTPNDRLIFDVGH 79
BLAST of EY650120 vs. ExPASy Swiss-Prot
Match: DXS_POLSJ (1-deoxy-D-xylulose-5-phosphate synthase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=dxs PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.035e-12 Identity = 40/74 (54.05%), Postives = 51/74 (68.92%), Query Frame = 3 Query: 564 PLLDTINYPIHMRNLSIRELKQLADELRSDVIFNVSKTGGHLGSTLGVIELTVAF-IMLSCSKDRIXEDVXHHT 782 PLL+TIN P +R L +LK LADELR+ V+ +VSKTGGHL S LG +ELTVA + + +DR+ DV H T Sbjct: 3 PLLETINSPADLRRLPRAQLKALADELRAFVLDSVSKTGGHLSSNLGTVELTVALHYVFNTPEDRLVWDVGHQT 76
BLAST of EY650120 vs. ExPASy Swiss-Prot
Match: DXS_RHILW (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=dxs PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.351e-12 Identity = 38/75 (50.67%), Postives = 50/75 (66.67%), Query Frame = 3 Query: 555 PPTPLLDTINYPIHMRNLSIRELKQLADELRSDVIFNVSKTGGHLGSTLGVIELTVAF-IMLSCSKDRIXEDVXH 776 P TPLLD + YP +R L R+L QLA E+R ++I VS+TGGHLG+ LGV+ELT+A + DR+ DV H Sbjct: 5 PKTPLLDQVTYPADLRKLEDRDLPQLAREVRDEMIDAVSRTGGHLGAGLGVVELTIAIHSVFDTPDDRLIFDVGH 79
BLAST of EY650120 vs. ExPASy Swiss-Prot
Match: DXS_CHRSD (1-deoxy-D-xylulose-5-phosphate synthase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=dxs PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.351e-12 Identity = 38/81 (46.91%), Postives = 54/81 (66.67%), Query Frame = 3 Query: 537 EYHSRRPPTPLLDTINYPIHMRNLSIRELKQLADELRSDVIFNVSKTGGHLGSTLGVIELTVAF-IMLSCSKDRIXEDVXH 776 E + RP TPLLDT +P + + + +L+QLADELR+ ++++V TGGH G+ LGV+ELTVA +L DR+ DV H Sbjct: 6 EIPAERPATPLLDTCEHPAALHDFNATQLRQLADELRAYLLYSVGCTGGHFGAGLGVVELTVALHHILDTPYDRLVWDVGH 86
BLAST of EY650120 vs. ExPASy Swiss-Prot
Match: DXS_BARBK (1-deoxy-D-xylulose-5-phosphate synthase OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=dxs PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.351e-12 Identity = 48/119 (40.34%), Postives = 67/119 (56.30%), Query Frame = 3 Query: 552 RPPTPLLDTINYPIHMRNLSIRELKQLADELRSDVIFNVSKTGGHLGSTLGVIELTVAF-IMLSCSKDRIXEDVXHHTTLIK-SDWEKGXMRTMMQH--MASLITKGLKWIDXFGPGQS 896 RP TPLLD + P+ +R L +L +LADELR+++I VS TGGHLG+ LGV+ELT+A + + DRI DV H K + +RT+ Q ++ + D FG G S Sbjct: 3 RPLTPLLDCVLSPLDLRALPASDLARLADELRAEMIDVVSVTGGHLGAGLGVVELTIALHYIFNTPDDRIIWDVGHQAYPHKILTGRRDKIRTLRQEGGLSGFTKRSESIYDPFGAGHS 121
BLAST of EY650120 vs. ExPASy Swiss-Prot
Match: DXS_AGRRK (1-deoxy-D-xylulose-5-phosphate synthase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=dxs PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.351e-12 Identity = 38/75 (50.67%), Postives = 51/75 (68.00%), Query Frame = 3 Query: 555 PPTPLLDTINYPIHMRNLSIRELKQLADELRSDVIFNVSKTGGHLGSTLGVIELTVAF-IMLSCSKDRIXEDVXH 776 P TPLLD ++YP +R L R+L QLA E+R ++I VS+TGGHLG+ LGV+ELT+A + DR+ DV H Sbjct: 5 PETPLLDQVHYPSDLRKLEDRDLPQLAREVRDEMIDAVSRTGGHLGAGLGVVELTIAIHNVFDTPNDRLIFDVGH 79
BLAST of EY650120 vs. ExPASy Swiss-Prot
Match: DXS_MAGSA (1-deoxy-D-xylulose-5-phosphate synthase OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=dxs PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.765e-12 Identity = 48/119 (40.34%), Postives = 67/119 (56.30%), Query Frame = 3 Query: 552 RPPTPLLDTINYPIHMRNLSIRELKQLADELRSDVIFNVSKTGGHLGSTLGVIELTVAF-IMLSCSKDRIXEDVXHHTTLIK-SDWEKGXMRTMMQ--HMASLITKGLKWIDXFGPGQS 896 +P + LLD ++ P +R+ SI EL+QL E+R ++I +VS TGGHLG+ LGV ELTVA + +DR+ DV H K +G MRTM Q ++ + D FG G S Sbjct: 9 KPSSSLLDRVSSPADIRDFSIEELEQLTYEVRQEMIQSVSFTGGHLGAGLGVAELTVALHHIFDTPRDRLIWDVGHQAYPHKILTGRRGRMRTMRQGGGLSGFTRRSESEYDPFGAGHS 127
BLAST of EY650120 vs. ExPASy Swiss-Prot
Match: DXS_RHOCS (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=dxs PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.305e-12 Identity = 39/73 (53.42%), Postives = 50/73 (68.49%), Query Frame = 3 Query: 561 TPLLDTINYPIHMRNLSIRELKQLADELRSDVIFNVSKTGGHLGSTLGVIELTVAF-IMLSCSKDRIXEDVXH 776 TPLLDT+N P +R L +L+Q ADELR++ I VS TGGHLG+ LGV+ELTVA + + DR+ DV H Sbjct: 7 TPLLDTVNTPEDLRKLDPSQLRQFADELRTETINAVSVTGGHLGAGLGVVELTVALHYVFNTPADRLIWDVGH 79 The following BLAST results are available for this feature:
BLAST of EY650120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 116
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Sequences
The
following sequences are available for this feature:
EST sequence >EY650120 ID=EY650120; Name=EY650120; organism=Citrus sinensis; type=EST; length=897bpback to top |