EY650054

Overview
NameEY650054
Unique NameEY650054
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650054 vs. ExPASy Swiss-Prot
Match: KCS18_ARATH (3-ketoacyl-CoA synthase 18 OS=Arabidopsis thaliana GN=FAE1 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.351e-19
Identity = 43/107 (40.19%), Postives = 59/107 (55.14%), Query Frame = 2
Query:  533 DEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLKTSMVMFGALDELFERLR*GRKTXGILVVNCSIFNP-HHRSQR*YKPLQMR-GIS*FTSGGHGCT 847
            D +SLDF R+I + SG+GDETY P+ ++       T    R +T  V+ GAL+ LFE  +   +  GILVVN S+FNP    S       ++R  I  F  GG GC+
Sbjct:  119 DPSSLDFLRKIQERSGLGDETYSPEGLIHVPPR-KTFAASREETEKVIIGALENLFENTKVNPREIGILVVNSSMFNPTPSLSAMVVNTFKLRSNIKSFNLGGMGCS 224          

HSP 2 Score: 51.2174 bits (121), Expect = 1.351e-19
Identity = 35/100 (35.00%), Postives = 51/100 (51.00%), Query Frame = 1
Query:  124 LQSVNLKYVKLGYHYLINHAIYLATIPVLLLVFSAEVGSLSREELWEKLWEDTRHDLASVLGFFGVFAFTLSVYFMSRPRSVYLVDFACYRPSDDLKVRV 423
            + SVN   VKL Y Y++ +   L   P L    + +   L+  +L   L    +H+L +V   F    F L +Y ++RP  VYLVD++CY P   LKV V
Sbjct:    1 MTSVN---VKLLYRYVLTNFFNLCLFP-LTAFLAGKASRLTINDLHNFL-SYLQHNLITVTLLFAFTVFGLVLYIVTRPNPVYLVDYSCYLPPPHLKVSV 95          
BLAST of EY650054 vs. ExPASy Swiss-Prot
Match: KCS8_ARATH (3-ketoacyl-CoA synthase 8 OS=Arabidopsis thaliana GN=KCS8 PE=2 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 1.713e-15
Identity = 35/85 (41.18%), Postives = 48/85 (56.47%), Query Frame = 2
Query:  524 SKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHG----RLKTSMVMFGALDELFERLR*GRKTXGILVVNCSIFNP 766
            +K  +  +DFQ +I++ SG+G ETYIP+ +      C  ++ G    R +T  V+FGALD LF          GILVVN S FNP
Sbjct:  106 NKESDHLVDFQEKILERSGLGQETYIPEGLQ-----CFPLQQGMGASRKETEEVIFGALDNLFRNTGVKPDDIGILVVNSSTFNP 185          

HSP 2 Score: 43.8986 bits (102), Expect = 1.713e-15
Identity = 24/81 (29.63%), Postives = 45/81 (55.56%), Query Frame = 1
Query:  184 IYLATIPVLLLVFSAEVGS-LSREELWEKLWEDTRHDLASVLGFFGVFAFTLSVYFMSRPRSVYLVDFACYRPSDDLKVRV 423
            ++   + + L+   A  GS ++ E+L +     T+++L ++     +  F   +Y ++RP+ VYLVDF+CY P   LKV +
Sbjct:    7 VFFKILFISLMAGLAMKGSKINVEDLQKFSLHHTQNNLQTISLLLFLVVFVWILYMLTRPKPVYLVDFSCYLPPSHLKVSI 87          
BLAST of EY650054 vs. ExPASy Swiss-Prot
Match: KCS1_ARATH (3-ketoacyl-CoA synthase 1 OS=Arabidopsis thaliana GN=KCS1 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.618e-13
Identity = 46/119 (38.66%), Postives = 67/119 (56.30%), Query Frame = 1
Query:   94 VRVRRRLPDFLQSVNLKYVKLGYHYLINHAIYLATIPVLLLVFSAEVGSLSRE-ELWEKLWED--TRHDLASVLGFFGVFAFTLSVYFMSRPRSVYLVDFACYRPSDDLKVRVYWTLTL 441
            +R+RRRLPD L SV LKYVKLG H   N    L  + +L L  +  V       + + +LW +   + D A+ L      +F L++Y  +R + VYLVDF+CY+P D+ K+ V   LT+
Sbjct:   28 IRIRRRLPDLLTSVKLKYVKLGLHNSCNVTTILFFLIILPLTGTVLVQLTGLTFDTFSELWSNQAVQLDTATRLTCLVFLSFVLTLYVANRSKPVYLVDFSCYKPEDERKISVDSFLTM 146          

HSP 2 Score: 72.0182 bits (175), Expect = 4.938e-12
Identity = 43/124 (34.68%), Postives = 67/124 (54.03%), Query Frame = 2
Query:  482 QVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLKTSMVMFGALDELFERLR*GRKTXGILVVNCSIFNP-HHRSQR*YKPLQMR-GIS*FTSGGHGCT 847
            +++ + F+ +  +     + ++ FQ+RI   +G+GDETY+P+ + S     + M   R +   VMFGALD LFE+        GIL+VNCS+FNP    S       +MR  I  +  GG GC+
Sbjct:  137 KISVDSFLTMTEENGSFTDDTVQFQQRISNRAGLGDETYLPRGITSTPPK-LNMSEARAEAEAVMFGALDSLFEKTGIKPAEVGILIVNCSLFNPTPSLSAMIVNHYKMREDIKSYNLGGMGCS 259          
BLAST of EY650054 vs. ExPASy Swiss-Prot
Match: KCS15_ARATH (3-ketoacyl-CoA synthase 15 OS=Arabidopsis thaliana GN=KCS15 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.697e-12
Identity = 35/94 (37.23%), Postives = 60/94 (63.83%), Query Frame = 2
Query:  482 QVTREQFIEVAGKWSKSDEASLDFQRRIMKSSGIGDETYIPKVVMSAEENCMTMKHGRLKTSMVMFGALDELFERLR*GRKTXGILVVNCSIFN 763
            ++T+  FIE+A K    +E +++ QR+++  SGIG+E+Y+P+VV       + ++ GR + +MV+FGA+DEL    +   K   ILV+NC + N
Sbjct:  103 KITKSDFIELAMKSGNFNETAIELQRKVLDQSGIGEESYMPRVVFKPGHR-VNLRDGREEAAMVIFGAIDELLAATKINVKHIKILVLNCGVLN 195          
The following BLAST results are available for this feature:
BLAST of EY650054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
KCS18_ARATH1.351e-1940.193-ketoacyl-CoA synthase 18 OS=Arabidopsis thaliana... [more]
KCS8_ARATH1.713e-1541.183-ketoacyl-CoA synthase 8 OS=Arabidopsis thaliana ... [more]
KCS1_ARATH2.618e-1338.663-ketoacyl-CoA synthase 1 OS=Arabidopsis thaliana ... [more]
KCS15_ARATH1.697e-1237.233-ketoacyl-CoA synthase 15 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-006-F09-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650054 ID=EY650054; Name=EY650054; organism=Citrus sinensis; type=EST; length=874bp
ATGGCTAGAAGTGAACGAGACCTCCTGTCAACTGGGGTTGTCAACCGTGG
GATCGAGTCCTCCGGTCCCAATGCCGGTTCTTTGACGTTCTCTGTGAGAG
TCCGGAGACGGCTGCCAGATTTTCTCCAGTCCGTGAACCTCAAGTACGTG
AAGCTAGGGTACCATTACCTCATCAACCATGCCATATATTTGGCCACCAT
TCCTGTGTTGTTACTTGTGTTTAGTGCTGAAGTGGGGAGTCTCAGTAGAG
AAGAGCTCTGGGAGAAGCTCTGGGAAGATACCCGCCACGATCTCGCCTCC
GTTCTTGGCTTCTTCGGCGTGTTCGCCTTCACGCTCTCCGTTTACTTCAT
GTCACGCCCTCGCTCCGTTTATCTCGTTGATTTTGCTTGCTATCGCCCCT
CCGATGATCTCAAGGTGCGCGTTTACTGGACATTGACATTAGCCTGAAAC
AGTGAACTTGTTGAACTAACGAATCATTTTTCAGGTGACGAGAGAGCAGT
TCATCGAAGTGGCAGGAAAATGGAGCAAGTCCGACGAGGCGAGCTTGGAT
TTTCAAAGGAGAATAATGAAATCATCGGGGATTGGAGATGAAACGTACAT
CCCCAAAGTAGTGATGTCTGCTGAGGAGAACTGCATGACGATGAAACACG
GTCGTTTAAAAACTTCGATGGTGATGTTTGGAGCTCTGGACGAGCTATTC
GAAAGACTAAGGTGAGGCCGAAAGACGNTCGGGATCCTTGTCGTGAATTG
CAGCATCTTTAATCCACACCATCGCTCTCAGCGATGATATAAACCATTAC
AAATGAGAGGGATATCATAGTTTACATCTGGGGGGCATGGCTGCACGCCN
GCGTATTTGGATTGACTTGCCCGG
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