EY650051
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_SYNJA (50S ribosomal protein L1 OS=Synechococcus sp. (strain JA-3-3Ab) GN=rplA PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.834e-41 Identity = 80/140 (57.14%), Postives = 109/140 (77.86%), Query Frame = 1 Query: 16 VGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYKL 435 VG +DLIE+I G ++FD LIA+PD+M +VA LG++LGPRGLMP+PK GTVT ++ QAI+EFK GK+EYRADKTGIVH+ FGK F + LL N A +SI+ N+P GAKG YW++ ++C++MGPSI ++I + + KL Sbjct: 95 VGFEDLIEEIGKGVIDFDLLIATPDVMPQVAKLGRLLGPRGLMPSPKGGTVTMDLAQAIKEFKAGKLEYRADKTGIVHLIFGKCKFPVEALLENLKAVQESIDRNRPPGAKGKYWRALHVCATMGPSIEVDINALRELKL 234
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_SYNP2 (50S ribosomal protein L1 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=rplA PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.395e-41 Identity = 79/138 (57.25%), Postives = 107/138 (77.54%), Query Frame = 1 Query: 13 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLD 426 LVG ++LIE I+ G M+F+ LIA+PDMM KVA LG+ LGPRGLMP+PK GTVTT++ AI FK GK E+RAD+ GIVH+ FGK+ F+ +DLL+N A ++I+ N+P GAKG YW+S Y+ +SMGPSI+++I + D Sbjct: 94 LVGSEELIEDIQKGMMDFEVLIATPDMMPKVARLGRQLGPRGLMPSPKGGTVTTDVATAIAAFKAGKQEFRADRAGIVHVLFGKSSFAAEDLLVNLKALQETIDRNRPSGAKGRYWRSIYVSASMGPSIQVDINALRD 231
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RK1_ODOSI (50S ribosomal protein L1, chloroplastic OS=Odontella sinensis GN=rpl1 PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.085e-41 Identity = 77/136 (56.62%), Postives = 104/136 (76.47%), Query Frame = 1 Query: 16 VGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEML 423 VG DDLIE+I G + FD LIA+PDMM K+A LG++LGP+GLMP+PK+GTV+T + + EFKKGK EY+ADK G+VH+ FGK++F+ L+ N A KSIE N+P G KG Y+KS +IC++MGPSI+L++ L Sbjct: 95 VGSDDLIEEISQGNISFDLLIATPDMMPKLAKLGRVLGPKGLMPSPKSGTVSTTLTATLSEFKKGKFEYKADKAGVVHVSFGKSNFTHSQLMENLTALYKSIEQNRPSGVKGKYFKSLFICTTMGPSIQLDLNIFL 230
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_SYNJB (50S ribosomal protein L1 OS=Synechococcus sp. GN=rplA PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 6.967e-41 Identity = 79/140 (56.43%), Postives = 108/140 (77.14%), Query Frame = 1 Query: 16 VGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYKL 435 VG +DLIE+I G M+FD LIA+PD+M +VA LG++LGPRGLMP+PK GTVT ++ QAI+EFK GK+EYRAD+TGIVH+ FGK F + LL N A +SI+ N+P GAKG YW++ ++ ++MGPSI ++I + + KL Sbjct: 95 VGYEDLIEEISKGMMDFDLLIATPDVMPQVAKLGRLLGPRGLMPSPKGGTVTMDLAQAIKEFKAGKLEYRADRTGIVHLIFGKCKFPVEALLENLKAVQESIDRNRPSGAKGKYWRTLHVSATMGPSIEVDINALRELKL 234
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_PROM4 (50S ribosomal protein L1 OS=Prochlorococcus marinus (strain MIT 9211) GN=rplA PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.648e-40 Identity = 79/138 (57.25%), Postives = 103/138 (74.64%), Query Frame = 1 Query: 13 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLD 426 L G ++L++ I G M FD LIA+PDMM KVA LG++LGPRGLMPNPK GTVT ++ AI+EFK GK+E+RADK GI+H+ FGKA F+ D LL N ++I+ NKP GAKG +WK+ YI S+MGPSI ++I + D Sbjct: 93 LAGEEELVDSISKGEMGFDLLIATPDMMPKVAKLGRVLGPRGLMPNPKTGTVTADLVGAIKEFKAGKLEFRADKAGIIHVRFGKASFNADALLENLKTLQETIDRNKPSGAKGRFWKTLYITSTMGPSIEVDIAALQD 230
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_ANASK (50S ribosomal protein L1 OS=Anaeromyxobacter sp. (strain K) GN=rplA PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.006e-39 Identity = 78/136 (57.35%), Postives = 104/136 (76.47%), Query Frame = 1 Query: 13 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 420 +VG +DL E+I+GGFM+FDKLIA+PDMM V LGKILGPRGLMPNPK GTVT ++ +A++E K GKVE+R +K GIVH+PFGKA F D L NF A ++ I KP+ AKGVY K+ + ++MGP I++++ E+ Sbjct: 94 IVGAEDLAEKIQGGFMDFDKLIATPDMMGVVGRLGKILGPRGLMPNPKVGTVTMDLARAVKEQKAGKVEFRVEKAGIVHVPFGKASFDPDKLKANFSAIMEVIYKAKPQTAKGVYVKNVTLSTTMGPGIKVDLAEL 229
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_ANAD2 (50S ribosomal protein L1 OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=rplA PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.006e-39 Identity = 78/136 (57.35%), Postives = 104/136 (76.47%), Query Frame = 1 Query: 13 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 420 +VG +DL E+I+GGFM+FDKLIA+PDMM V LGKILGPRGLMPNPK GTVT ++ +A++E K GKVE+R +K GIVH+PFGKA F D L NF A ++ I KP+ AKGVY K+ + ++MGP I++++ E+ Sbjct: 94 IVGAEDLAEKIQGGFMDFDKLIATPDMMGVVGRLGKILGPRGLMPNPKVGTVTMDLARAVKEQKAGKVEFRVEKAGIVHVPFGKASFDPDKLKANFSAIMEVIYKAKPQTAKGVYVKNVTLSTTMGPGIKVDLAEL 229
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_ANADE (50S ribosomal protein L1 OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=rplA PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.314e-39 Identity = 78/136 (57.35%), Postives = 104/136 (76.47%), Query Frame = 1 Query: 13 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 420 +VG +DL E+I+GGFM+FDKLIA+PDMM V LGKILGPRGLMPNPK GTVT ++ +A++E K GKVE+R +K GIVH+PFGKA F + L NF A ++ I KP+ AKGVY K+ + ++MGP I+L++ E+ Sbjct: 94 IVGAEDLAEKIQGGFMDFDKLIATPDMMGVVGRLGKILGPRGLMPNPKVGTVTMDLARAVKEQKAGKVEFRVEKAGIVHVPFGKASFDPEKLKANFSAIMEVIYKAKPQTAKGVYVKNVTLSTTMGPGIKLDLAEL 229
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RK1_PHATR (50S ribosomal protein L1, chloroplastic OS=Phaeodactylum tricornutum GN=rpl1 PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.927e-39 Identity = 74/134 (55.22%), Postives = 105/134 (78.36%), Query Frame = 1 Query: 13 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIK 414 +VG D+LI QI G + FD LIA+P+MM K+A LG++LGP+GLMP+PK+GTVT+ + + EFKKGK EY+ADKTGIVH+ FGK++F+ + L+ N A +SIE N+P G KG Y+KS IC++MGPS++L+++ Sbjct: 94 IVGNDELIAQITQGQINFDLLIATPNMMPKLAKLGRMLGPKGLMPSPKSGTVTSTLQSTLTEFKKGKFEYKADKTGIVHVNFGKSNFTNEQLVENLKALYQSIEQNRPSGVKGKYFKSVSICTTMGPSVKLDLE 227
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_ANADF (50S ribosomal protein L1 OS=Anaeromyxobacter sp. (strain Fw109-5) GN=rplA PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 8.517e-39 Identity = 74/136 (54.41%), Postives = 104/136 (76.47%), Query Frame = 1 Query: 13 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 420 +VG +DL E+++GGFM+FDK++A+PDMM V LGK+LGPRGLMPNPK GTV+ +I +A++E K GKVE+R +K GIVH+PFGKA F + L NF A ++ I KP+ AKGVY K+ + ++MGP I+L++ E+ Sbjct: 94 IVGAEDLAEKVQGGFMDFDKVLATPDMMGVVGRLGKVLGPRGLMPNPKVGTVSADIARAVKEQKAGKVEFRVEKAGIVHVPFGKASFEPEKLKANFSAIMEIIYKAKPQTAKGVYVKNVTLSTTMGPGIKLDLSEL 229 The following BLAST results are available for this feature:
BLAST of EY650051 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY650051 ID=EY650051; Name=EY650051; organism=Citrus sinensis; type=EST; length=762bpback to top |