EY649983

Overview
NameEY649983
Unique NameEY649983
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649983 vs. ExPASy Swiss-Prot
Match: CAHC_HORVU (Carbonic anhydrase, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.507e-30
Identity = 68/182 (37.36%), Postives = 88/182 (48.35%), Query Frame = 3
Query:   15 NWCLTSVS-QAQSSLIKSSTLRPSIVARLNSPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYXXXXXXXXXXXXXXXXXXPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTK 557
            NWC  +V+ +A+SS I +S   P   A  +S +  P LIR  PV AAP                                    VA A ++                +VER+K GF  FK E Y+K P  +  L  GQ+PKYMVFAC+DSRVCPS  L  +PGEAF +RN+AN+VP Y + K
Sbjct:   73 NWCYATVAPRARSSTIAASLGTP---APSSSASFRPKLIRTTPVQAAP------------------------------------VAPALMDA---------------AVERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYCKNK 200          

HSP 2 Score: 53.1434 bits (126), Expect = 2.507e-30
Identity = 25/43 (58.14%), Postives = 29/43 (67.44%), Query Frame = 2
Query:  614 IVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVIIGIPAXSMV 742
            IVVIGHS CGGIK L+S     ++S  F+EDWV IG PA   V
Sbjct:  220 IVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKKKV 262          
BLAST of EY649983 vs. ExPASy Swiss-Prot
Match: CYNT_ECOLI (Carbonic anhydrase 1 OS=Escherichia coli (strain K12) GN=cynT PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 9.828e-13
Identity = 32/70 (45.71%), Postives = 47/70 (67.14%), Query Frame = 3
Query:  336 VERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPY 545
            ++ I +GF+ F+RE + K  AL+ +LA  QSP+ +  +CSDSR+ P  V   +PG+ FV+RN  NIVP Y
Sbjct:    1 MKEIIDGFLKFQREAFPKREALFKQLATQQSPRTLFISCSDSRLVPELVTQREPGDLFVIRNAGNIVPSY 70          

HSP 2 Score: 22.7126 bits (47), Expect = 9.828e-13
Identity = 8/18 (44.44%), Postives = 12/18 (66.67%), Query Frame = 2
Query:  611 NIVVIGHSACGGIKGLMS 664
            +IV+ GHS CG +  + S
Sbjct:   92 DIVICGHSNCGAMTAIAS 109          
BLAST of EY649983 vs. ExPASy Swiss-Prot
Match: CYNT_ECO57 (Carbonic anhydrase 1 OS=Escherichia coli O157:H7 GN=cynT PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 9.828e-13
Identity = 32/70 (45.71%), Postives = 47/70 (67.14%), Query Frame = 3
Query:  336 VERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPY 545
            ++ I +GF+ F+RE + K  AL+ +LA  QSP+ +  +CSDSR+ P  V   +PG+ FV+RN  NIVP Y
Sbjct:    1 MKEIIDGFLKFQREAFPKREALFKQLATQQSPRTLFISCSDSRLVPELVTQREPGDLFVIRNAGNIVPSY 70          

HSP 2 Score: 22.7126 bits (47), Expect = 9.828e-13
Identity = 8/18 (44.44%), Postives = 12/18 (66.67%), Query Frame = 2
Query:  611 NIVVIGHSACGGIKGLMS 664
            +IV+ GHS CG +  + S
Sbjct:   92 DIVICGHSNCGAMTAIAS 109          
BLAST of EY649983 vs. ExPASy Swiss-Prot
Match: CYNT_SYNE7 (Carbonic anhydrase OS=Synechococcus elongatus (strain PCC 7942) GN=icfA PE=3 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 6.071e-12
Identity = 26/70 (37.14%), Postives = 42/70 (60.00%), Query Frame = 3
Query:  336 VERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPY 545
            + ++ EG  HF+   Y  +  L+ + AKGQ P+ +   CSDSR+ P+ +     GE FV+RN  N++PP+
Sbjct:    1 MRKLIEGLRHFRTSYYPSHRDLFEQFAKGQHPRVLFITCSDSRIDPNLITQSGMGELFVIRNAGNLIPPF 70          

HSP 2 Score: 28.1054 bits (61), Expect = 6.071e-12
Identity = 12/34 (35.29%), Postives = 18/34 (52.94%), Query Frame = 2
Query:  611 NIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWV 712
            ++VV GHS CG +KGL+            + DW+
Sbjct:   92 HVVVCGHSHCGAMKGLLKLN-QLQEDMPLVYDWL 124          
BLAST of EY649983 vs. ExPASy Swiss-Prot
Match: CYNT_PSEAE (Carbonic anhydrase OS=Pseudomonas aeruginosa GN=cynT PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 7.952e-12
Identity = 32/67 (47.76%), Postives = 42/67 (62.69%), Query Frame = 3
Query:  345 IKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPY 545
            I +GF+ F+R+ Y     L+  LA  Q+PK +  ACSDSRV P  +   +PGE FV+RN  NIVP Y
Sbjct:    4 IIDGFLRFQRDAYPARSQLFKSLATRQAPKALFIACSDSRVVPELLTQREPGELFVIRNAGNIVPGY 70          

HSP 2 Score: 22.7126 bits (47), Expect = 7.952e-12
Identity = 9/18 (50.00%), Postives = 12/18 (66.67%), Query Frame = 2
Query:  611 NIVVIGHSACGGIKGLMS 664
            +IVV GHS CG +  + S
Sbjct:   92 DIVVCGHSDCGAMGAIAS 109          
BLAST of EY649983 vs. ExPASy Swiss-Prot
Match: CYNT_SYNY3 (Carbonic anhydrase OS=Synechocystis sp. (strain PCC 6803) GN=icfA PE=1 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 2.907e-11
Identity = 26/70 (37.14%), Postives = 43/70 (61.43%), Query Frame = 3
Query:  336 VERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPY 545
            ++R+ EG   F+   +  +  L+ +L+ GQ P+ +   CSDSRV P+ +   + G+ FV+RN  NI+PPY
Sbjct:    1 MQRLIEGLQKFREGYFSSHRDLFEQLSHGQHPRILFICCSDSRVDPNLITQSEVGDLFVIRNAGNIIPPY 70          

HSP 2 Score: 27.7202 bits (60), Expect = 2.907e-11
Identity = 12/33 (36.36%), Postives = 17/33 (51.52%), Query Frame = 2
Query:  614 IVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWV 712
            I+V GHS CG +KGL+            + DW+
Sbjct:   93 IIVCGHSHCGAMKGLLKLN-SLQEKLPLVYDWL 124          
The following BLAST results are available for this feature:
BLAST of EY649983 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
CAHC_HORVU2.507e-3037.36Carbonic anhydrase, chloroplastic OS=Hordeum vulga... [more]
CYNT_ECOLI9.828e-1345.71Carbonic anhydrase 1 OS=Escherichia coli (strain K... [more]
CYNT_ECO579.828e-1345.71Carbonic anhydrase 1 OS=Escherichia coli O157:H7 G... [more]
CYNT_SYNE76.071e-1237.14Carbonic anhydrase OS=Synechococcus elongatus (str... [more]
CYNT_PSEAE7.952e-1247.76Carbonic anhydrase OS=Pseudomonas aeruginosa GN=cy... [more]
CYNT_SYNY32.907e-1137.14Carbonic anhydrase OS=Synechocystis sp. (strain PC... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-005-H01-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649983 ID=EY649983; Name=EY649983; organism=Citrus sinensis; type=EST; length=932bp
CAGCTTCGATCAATAACTGGTGCCTTACTTCTGTTTCTCAAGCTCAATCC
TCTCTCATCAAAAGCTCCACATTACGTCCCTCCATCGTTGCAAGGCTCAA
CTCTCCTGCTTCTCCTCCTAGCCTCATCCGAAACGAGCCCGTTTTTGCTG
CACCAGCTCCTATCATCAACCCTAACTGGAGGGAAGACATGGCAAATCAG
TCGTACGAGGAAGCCATTGAAGCTCTCAAGAAACTTCTCAAGGAGAAGGA
AGACTTGAAACCTGTTGCTGCTGCAAAAGTAGAGCAGATTACTGCGCAGC
TACAGACTCCATCTGACACCAAAGCATTTGATTCCGTGGAGAGGATCAAA
GAGGGCTTCATTCACTTCAAGAGAGAAAAATACGAGAAAAATCCAGCTCT
GTACTCTGAGCTCGCCAAAGGCCAAAGCCCGAAGTATATGGTATTTGCCT
GCTCAGACTCCAGGGTTTGCCCGTCCCATGTGTTGGATTTTCAACCTGGG
GAAGCTTTCGTGGTTCGCAATGTTGCTAACATTGTTCCACCCTATGATCA
GACTAAATATGCTGGAGTTGGAGCTGCTGTCGAGTATGCAGTTTTGCATC
TCAAGGTTTAAACATTGTGGTCATTGGGCACAGCGCCTGTGGTGGCATCA
AAGGACTCATGTCTTTCACATTTGATGGAAACAACTCCACCGATTTCATT
GAAGACTGGGTGATAATTGGCATCCCTGCCAGNTCTATGGTGTAACAGAG
CATGGTGACATGCCTTTTGGAGACAAGCACATACTGTGAATGGNAGCNGT
GAATGTGTCCCTCAGTATCTGCTACGTACCATTTGTGAGAGAGGCTGGTG
ACAAACTCTGCACTCAAGGTGGTACTATGATTCGTAAATGATCATCAGCT
CTGGGGCTCGACTTAGCTTNCTCTCCTCTCGG
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