EY649977 | Citrus Genome Database

Overview


Name	EY649977
Unique Name	EY649977
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	948

Libraries


Library Name	Type
Sweet orange leaf, greenhouse plant	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY649977 vs. ExPASy Swiss-Prot
Match: UBIQ_ACECL (Ubiquitin OS=Acetabularia cliftonii PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.042e-34
Identity = 73/76 (96.05%), Postives = 76/76 (100.00%), Query Frame = 3

Query:   78 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 305
            MQIFVKTLTGKTITLEVESSDT++NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 147.517 bits (371), Expect = 1.042e-34
Identity = 73/76 (96.05%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  306 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 533
            MQIFVKTLTGKTITLEVESSDT++NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 88.5817 bits (218), Expect = 1.029e-18
Identity = 44/54 (81.48%), Postives = 47/54 (87.04%), Query Frame = 3

Query:  534 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDIEGIPPDQQRLIFAGSSSRMGR 695
            MQIFVKTLTGKTITLEVESSDT++NV +KIQD EGIPPDQQRLIFAG     GR
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 4 Score: 25.409 bits (54), Expect = 1.029e-18
Identity = 10/16 (62.50%), Postives = 13/16 (81.25%), Query Frame = 2

Query:  674 QQLEDGPTLADYTFKR 721
            +QLEDG TLADY  ++
Sbjct:   48 KQLEDGRTLADYNIQK 63

HSP 5 Score: 20.4014 bits (41), Expect = 1.029e-18
Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 1

Query:  709 HIQKESTLH 735
            +IQKESTLH
Sbjct:   60 NIQKESTLH 68

[Close]

BLAST of EY649977 vs. ExPASy Swiss-Prot
Match: UBIQ_TRYCR (Ubiquitin OS=Trypanosoma cruzi PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.361e-34
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 3

Query:   78 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 305
            MQIFVKTLTGKTI LEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 147.132 bits (370), Expect = 1.361e-34
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  306 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 533
            MQIFVKTLTGKTI LEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 88.1965 bits (217), Expect = 1.334e-18
Identity = 45/54 (83.33%), Postives = 46/54 (85.19%), Query Frame = 3

Query:  534 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDIEGIPPDQQRLIFAGSSSRMGR 695
            MQIFVKTLTGKTI LEVESSDTI+NV AKIQD EGIPPDQQRLIFAG     GR
Sbjct:    1 MQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 4 Score: 25.409 bits (54), Expect = 1.334e-18
Identity = 10/16 (62.50%), Postives = 13/16 (81.25%), Query Frame = 2

Query:  674 QQLEDGPTLADYTFKR 721
            +QLEDG TLADY  ++
Sbjct:   48 KQLEDGRTLADYNIQK 63

HSP 5 Score: 20.4014 bits (41), Expect = 1.334e-18
Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 1

Query:  709 HIQKESTLH 735
            +IQKESTLH
Sbjct:   60 NIQKESTLH 68

[Close]

BLAST of EY649977 vs. ExPASy Swiss-Prot
Match: UBIQ_ACACA (Ubiquitin OS=Acanthamoeba castellanii PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.361e-34
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 3

Query:   78 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 305
            MQIFVKTLTGKTITLEVESSDTI+NVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 147.132 bits (370), Expect = 1.361e-34
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  306 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 533
            MQIFVKTLTGKTITLEVESSDTI+NVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 88.1965 bits (217), Expect = 1.334e-18
Identity = 45/54 (83.33%), Postives = 46/54 (85.19%), Query Frame = 3

Query:  534 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDIEGIPPDQQRLIFAGSSSRMGR 695
            MQIFVKTLTGKTITLEVESSDTI+NV  KIQD EGIPPDQQRLIFAG     GR
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 4 Score: 25.409 bits (54), Expect = 1.334e-18
Identity = 10/16 (62.50%), Postives = 13/16 (81.25%), Query Frame = 2

Query:  674 QQLEDGPTLADYTFKR 721
            +QLEDG TLADY  ++
Sbjct:   48 KQLEDGRTLADYNIQK 63

HSP 5 Score: 20.4014 bits (41), Expect = 1.334e-18
Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 1

Query:  709 HIQKESTLH 735
            +IQKESTLH
Sbjct:   60 NIQKESTLH 68

[Close]

BLAST of EY649977 vs. ExPASy Swiss-Prot
Match: UBIQ_GEOCY (Ubiquitin OS=Geodia cydonium PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.777e-34
Identity = 73/76 (96.05%), Postives = 76/76 (100.00%), Query Frame = 3

Query:   78 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 305
            MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 146.747 bits (369), Expect = 1.777e-34
Identity = 73/76 (96.05%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  306 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 533
            MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 88.9669 bits (219), Expect = 1.729e-18
Identity = 45/54 (83.33%), Postives = 47/54 (87.04%), Query Frame = 3

Query:  534 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDIEGIPPDQQRLIFAGSSSRMGR 695
            MQIFVKTLTGKTITLEVE+SDTI+NV AKIQD EGIPPDQQRLIFAG     GR
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 4 Score: 24.2534 bits (51), Expect = 1.729e-18
Identity = 9/16 (56.25%), Postives = 13/16 (81.25%), Query Frame = 2

Query:  674 QQLEDGPTLADYTFKR 721
            +QLEDG TL+DY  ++
Sbjct:   48 KQLEDGRTLSDYNIQK 63

HSP 5 Score: 20.4014 bits (41), Expect = 1.729e-18
Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 1

Query:  709 HIQKESTLH 735
            +IQKESTLH
Sbjct:   60 NIQKESTLH 68

[Close]

BLAST of EY649977 vs. ExPASy Swiss-Prot
Match: UBIQ_CAEEL (Ubiquitin OS=Caenorhabditis elegans GN=ubq-1 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.777e-34
Identity = 73/76 (96.05%), Postives = 76/76 (100.00%), Query Frame = 3

Query:   78 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 305
            MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 146.747 bits (369), Expect = 1.777e-34
Identity = 73/76 (96.05%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  306 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 533
            MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 88.9669 bits (219), Expect = 1.729e-18
Identity = 45/54 (83.33%), Postives = 47/54 (87.04%), Query Frame = 3

Query:  534 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDIEGIPPDQQRLIFAGSSSRMGR 695
            MQIFVKTLTGKTITLEVE+SDTI+NV AKIQD EGIPPDQQRLIFAG     GR
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 4 Score: 24.2534 bits (51), Expect = 1.729e-18
Identity = 9/16 (56.25%), Postives = 13/16 (81.25%), Query Frame = 2

Query:  674 QQLEDGPTLADYTFKR 721
            +QLEDG TL+DY  ++
Sbjct:   48 KQLEDGRTLSDYNIQK 63

HSP 5 Score: 20.4014 bits (41), Expect = 1.729e-18
Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 1

Query:  709 HIQKESTLH 735
            +IQKESTLH
Sbjct:   60 NIQKESTLH 68

[Close]

BLAST of EY649977 vs. ExPASy Swiss-Prot
Match: UBIQ_EUPEU (Ubiquitin OS=Euplotes eurystomus PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.321e-34
Identity = 73/76 (96.05%), Postives = 74/76 (97.37%), Query Frame = 3

Query:   78 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 305
            MQIFVKTLTGKTITL+VE SDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 146.362 bits (368), Expect = 2.321e-34
Identity = 73/76 (96.05%), Postives = 74/76 (97.37%), Query Frame = 3

Query:  306 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 533
            MQIFVKTLTGKTITL+VE SDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 87.4261 bits (215), Expect = 2.241e-18
Identity = 44/54 (81.48%), Postives = 45/54 (83.33%), Query Frame = 3

Query:  534 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDIEGIPPDQQRLIFAGSSSRMGR 695
            MQIFVKTLTGKTITL+VE SDTIDNV  KIQD EGIPPDQQRLIFAG     GR
Sbjct:    1 MQIFVKTLTGKTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 4 Score: 25.409 bits (54), Expect = 2.241e-18
Identity = 10/16 (62.50%), Postives = 13/16 (81.25%), Query Frame = 2

Query:  674 QQLEDGPTLADYTFKR 721
            +QLEDG TLADY  ++
Sbjct:   48 KQLEDGRTLADYNIQK 63

HSP 5 Score: 20.4014 bits (41), Expect = 2.241e-18
Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 1

Query:  709 HIQKESTLH 735
            +IQKESTLH
Sbjct:   60 NIQKESTLH 68

[Close]

BLAST of EY649977 vs. ExPASy Swiss-Prot
Match: UBIQ_AGLNE (Ubiquitin OS=Aglaothamnion neglectum PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.321e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:   78 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 305
            MQIFVKTLTGKTITLEVESSDTI+NVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 146.362 bits (368), Expect = 2.321e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  306 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 533
            MQIFVKTLTGKTITLEVESSDTI+NVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 88.5817 bits (218), Expect = 2.241e-18
Identity = 45/54 (83.33%), Postives = 46/54 (85.19%), Query Frame = 3

Query:  534 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDIEGIPPDQQRLIFAGSSSRMGR 695
            MQIFVKTLTGKTITLEVESSDTI+NV  KIQD EGIPPDQQRLIFAG     GR
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 4 Score: 24.2534 bits (51), Expect = 2.241e-18
Identity = 9/16 (56.25%), Postives = 13/16 (81.25%), Query Frame = 2

Query:  674 QQLEDGPTLADYTFKR 721
            +QLEDG TL+DY  ++
Sbjct:   48 KQLEDGRTLSDYNIQK 63

HSP 5 Score: 20.4014 bits (41), Expect = 2.241e-18
Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 1

Query:  709 HIQKESTLH 735
            +IQKESTLH
Sbjct:   60 NIQKESTLH 68

[Close]

BLAST of EY649977 vs. ExPASy Swiss-Prot
Match: UBIQ_XENLA (Ubiquitin OS=Xenopus laevis PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.032e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:   78 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 305
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.976 bits (367), Expect = 3.032e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  306 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 533
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 88.1965 bits (217), Expect = 2.904e-18
Identity = 45/54 (83.33%), Postives = 46/54 (85.19%), Query Frame = 3

Query:  534 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDIEGIPPDQQRLIFAGSSSRMGR 695
            MQIFVKTLTGKTITLEVE SDTI+NV AKIQD EGIPPDQQRLIFAG     GR
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 4 Score: 24.2534 bits (51), Expect = 2.904e-18
Identity = 9/16 (56.25%), Postives = 13/16 (81.25%), Query Frame = 2

Query:  674 QQLEDGPTLADYTFKR 721
            +QLEDG TL+DY  ++
Sbjct:   48 KQLEDGRTLSDYNIQK 63

HSP 5 Score: 20.4014 bits (41), Expect = 2.904e-18
Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 1

Query:  709 HIQKESTLH 735
            +IQKESTLH
Sbjct:   60 NIQKESTLH 68

[Close]

BLAST of EY649977 vs. ExPASy Swiss-Prot
Match: UBIQ_SPOFR (Ubiquitin OS=Spodoptera frugiperda PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.032e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:   78 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 305
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.976 bits (367), Expect = 3.032e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  306 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 533
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 88.1965 bits (217), Expect = 2.904e-18
Identity = 45/54 (83.33%), Postives = 46/54 (85.19%), Query Frame = 3

Query:  534 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDIEGIPPDQQRLIFAGSSSRMGR 695
            MQIFVKTLTGKTITLEVE SDTI+NV AKIQD EGIPPDQQRLIFAG     GR
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 4 Score: 24.2534 bits (51), Expect = 2.904e-18
Identity = 9/16 (56.25%), Postives = 13/16 (81.25%), Query Frame = 2

Query:  674 QQLEDGPTLADYTFKR 721
            +QLEDG TL+DY  ++
Sbjct:   48 KQLEDGRTLSDYNIQK 63

HSP 5 Score: 20.4014 bits (41), Expect = 2.904e-18
Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 1

Query:  709 HIQKESTLH 735
            +IQKESTLH
Sbjct:   60 NIQKESTLH 68

[Close]

BLAST of EY649977 vs. ExPASy Swiss-Prot
Match: UBIQ_RAT (Ubiquitin OS=Rattus norvegicus GN=Rps27a PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.032e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:   78 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 305
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.976 bits (367), Expect = 3.032e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  306 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 533
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 88.1965 bits (217), Expect = 2.904e-18
Identity = 45/54 (83.33%), Postives = 46/54 (85.19%), Query Frame = 3

Query:  534 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDIEGIPPDQQRLIFAGSSSRMGR 695
            MQIFVKTLTGKTITLEVE SDTI+NV AKIQD EGIPPDQQRLIFAG     GR
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 4 Score: 24.2534 bits (51), Expect = 2.904e-18
Identity = 9/16 (56.25%), Postives = 13/16 (81.25%), Query Frame = 2

Query:  674 QQLEDGPTLADYTFKR 721
            +QLEDG TL+DY  ++
Sbjct:   48 KQLEDGRTLSDYNIQK 63

HSP 5 Score: 20.4014 bits (41), Expect = 2.904e-18
Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 1

Query:  709 HIQKESTLH 735
            +IQKESTLH
Sbjct:   60 NIQKESTLH 68

The following BLAST results are available for this feature:

BLAST of EY649977 vs. ExPASy Swiss-Prot

BLAST of EY649977 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99


Match Name	E-value	Identity	Description
UBIQ_ACECL	1.042e-34	96.05	Ubiquitin OS=Acetabularia cliftonii PE=3 SV=1	[more]
UBIQ_TRYCR	1.361e-34	97.37	Ubiquitin OS=Trypanosoma cruzi PE=3 SV=1	[more]
UBIQ_ACACA	1.361e-34	97.37	Ubiquitin OS=Acanthamoeba castellanii PE=3 SV=1	[more]
UBIQ_GEOCY	1.777e-34	96.05	Ubiquitin OS=Geodia cydonium PE=3 SV=1	[more]
UBIQ_CAEEL	1.777e-34	96.05	Ubiquitin OS=Caenorhabditis elegans GN=ubq-1 PE=1 ...	[more]
UBIQ_EUPEU	2.321e-34	96.05	Ubiquitin OS=Euplotes eurystomus PE=3 SV=1	[more]
UBIQ_AGLNE	2.321e-34	96.05	Ubiquitin OS=Aglaothamnion neglectum PE=3 SV=1	[more]
UBIQ_XENLA	3.032e-34	96.05	Ubiquitin OS=Xenopus laevis PE=1 SV=1	[more]
UBIQ_SPOFR	3.032e-34	96.05	Ubiquitin OS=Spodoptera frugiperda PE=3 SV=1	[more]
UBIQ_RAT	3.032e-34	96.05	Ubiquitin OS=Rattus norvegicus GN=Rps27a PE=1 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C1-100-005-G05-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY649977 ID=EY649977; Name=EY649977; organism=Citrus sinensis; type=EST; length=948bp
ATTAAACCAATAAAAAAAAAAAAGAACAAAAAAGAGTTTAGTTTAGATAC
CGAGGCTCCCAATCTCAGCCTTCCAACATGCAGATCTTTGTGAAAACTTT
GACCGGCAAGACCATCACTCTCGAGGTGGAGAGCTCCGACACGATCGACA
ACGTCAAGGCTAAGATCCAGGACAAGGAAGGGATTCCACCGGACCAGCAG
CGGCTGATCTTCGCCGGAAAGCAGCTCGAGGACGGGCGCACCTTGGCGGA
TTACAACATCCAGAAGGAGTCGACTCTCCACCTCGTCCTCCGTCTCCGCG
GCGGCATGCAGATCTTCGTCAAGACTCTGACCGGGAAGACGATCACCCTG
GAGGTGGAGAGCTCCGACACGATCGACAACGTGAAGGCGAAGATCCAGGA
CAAGGAAGGGATCCCCCCGGACCAGCAGAGGCTCATCTTCGCCGGCAAGC
AGCTGGAGGACGGCCGCACCCTGGCCGATTATAACATCCAGAAGGAATCC
ACGCTCCACCTTGTGTTGCGCCTGAGGGGAGGAATGCAGATCTTCGTCAA
GACGTTGACCGGGAAGACGATCACCCTGGAGGTGGAGAGCTCCGACACGA
TCGACAACGTGAATGCCAAGATCCAGGACATAGAGGGGATTCCTCCGGAC
CAGCAGAGGCTCATCTTCGCCGGCAGCAGCTCGAGGATGGGCCGACTCTC
GCCGATTACACATTCAAAAGGAGTCCACTCTNCACCTTGTCCTCGTCTNC
GGGGGTGGTGACTNCTAAAAAATAATGTGGGATGTGTCCGCGTTTGATTG
GATGGCGCTATNATATTAATTAGGTTGGATGGGGCGCCTTGCTTTATNAT
TTTGTAATACAATGGGGTATGGGCANCCGNTGGGCCTAATNNNCTCTCCA
TGGNAATATAATTAGGCCCTAGTTTTAATTTAAAAAAAAAAAAGGGCG