EY649977 | Citrus Genome Database

Overview


Name	EY649977
Unique Name	EY649977
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	948

Libraries


Library Name	Type
Sweet orange leaf, greenhouse plant	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY649977 vs. ExPASy Swiss-Prot
Match: UBIQ_RABIT (Ubiquitin OS=Oryctolagus cuniculus PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.032e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:   78 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 305
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.976 bits (367), Expect = 3.032e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  306 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 533
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 88.1965 bits (217), Expect = 2.904e-18
Identity = 45/54 (83.33%), Postives = 46/54 (85.19%), Query Frame = 3

Query:  534 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDIEGIPPDQQRLIFAGSSSRMGR 695
            MQIFVKTLTGKTITLEVE SDTI+NV AKIQD EGIPPDQQRLIFAG     GR
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 4 Score: 24.2534 bits (51), Expect = 2.904e-18
Identity = 9/16 (56.25%), Postives = 13/16 (81.25%), Query Frame = 2

Query:  674 QQLEDGPTLADYTFKR 721
            +QLEDG TL+DY  ++
Sbjct:   48 KQLEDGRTLSDYNIQK 63

HSP 5 Score: 20.4014 bits (41), Expect = 2.904e-18
Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 1

Query:  709 HIQKESTLH 735
            +IQKESTLH
Sbjct:   60 NIQKESTLH 68

[Close]

BLAST of EY649977 vs. ExPASy Swiss-Prot
Match: UBIQ_PONPY (Ubiquitin OS=Pongo pygmaeus GN=UBA52 PE=3 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 3.032e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:   78 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 305
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.976 bits (367), Expect = 3.032e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  306 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 533
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 88.1965 bits (217), Expect = 2.904e-18
Identity = 45/54 (83.33%), Postives = 46/54 (85.19%), Query Frame = 3

Query:  534 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDIEGIPPDQQRLIFAGSSSRMGR 695
            MQIFVKTLTGKTITLEVE SDTI+NV AKIQD EGIPPDQQRLIFAG     GR
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 4 Score: 24.2534 bits (51), Expect = 2.904e-18
Identity = 9/16 (56.25%), Postives = 13/16 (81.25%), Query Frame = 2

Query:  674 QQLEDGPTLADYTFKR 721
            +QLEDG TL+DY  ++
Sbjct:   48 KQLEDGRTLSDYNIQK 63

HSP 5 Score: 20.4014 bits (41), Expect = 2.904e-18
Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 1

Query:  709 HIQKESTLH 735
            +IQKESTLH
Sbjct:   60 NIQKESTLH 68

[Close]

BLAST of EY649977 vs. ExPASy Swiss-Prot
Match: UBIQ_PLUXY (Ubiquitin OS=Plutella xylostella PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.032e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:   78 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 305
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.976 bits (367), Expect = 3.032e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  306 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 533
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 88.1965 bits (217), Expect = 2.904e-18
Identity = 45/54 (83.33%), Postives = 46/54 (85.19%), Query Frame = 3

Query:  534 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDIEGIPPDQQRLIFAGSSSRMGR 695
            MQIFVKTLTGKTITLEVE SDTI+NV AKIQD EGIPPDQQRLIFAG     GR
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 4 Score: 24.2534 bits (51), Expect = 2.904e-18
Identity = 9/16 (56.25%), Postives = 13/16 (81.25%), Query Frame = 2

Query:  674 QQLEDGPTLADYTFKR 721
            +QLEDG TL+DY  ++
Sbjct:   48 KQLEDGRTLSDYNIQK 63

HSP 5 Score: 20.4014 bits (41), Expect = 2.904e-18
Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 1

Query:  709 HIQKESTLH 735
            +IQKESTLH
Sbjct:   60 NIQKESTLH 68

[Close]

BLAST of EY649977 vs. ExPASy Swiss-Prot
Match: UBIQ_PIG (Ubiquitin OS=Sus scrofa GN=UBA52 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.032e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:   78 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 305
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.976 bits (367), Expect = 3.032e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  306 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 533
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 88.1965 bits (217), Expect = 2.904e-18
Identity = 45/54 (83.33%), Postives = 46/54 (85.19%), Query Frame = 3

Query:  534 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDIEGIPPDQQRLIFAGSSSRMGR 695
            MQIFVKTLTGKTITLEVE SDTI+NV AKIQD EGIPPDQQRLIFAG     GR
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 4 Score: 24.2534 bits (51), Expect = 2.904e-18
Identity = 9/16 (56.25%), Postives = 13/16 (81.25%), Query Frame = 2

Query:  674 QQLEDGPTLADYTFKR 721
            +QLEDG TL+DY  ++
Sbjct:   48 KQLEDGRTLSDYNIQK 63

HSP 5 Score: 20.4014 bits (41), Expect = 2.904e-18
Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 1

Query:  709 HIQKESTLH 735
            +IQKESTLH
Sbjct:   60 NIQKESTLH 68

[Close]

BLAST of EY649977 vs. ExPASy Swiss-Prot
Match: UBIQ_PANTR (Ubiquitin OS=Pan troglodytes GN=UBB PE=1 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 3.032e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:   78 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 305
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.976 bits (367), Expect = 3.032e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  306 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 533
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 88.1965 bits (217), Expect = 2.904e-18
Identity = 45/54 (83.33%), Postives = 46/54 (85.19%), Query Frame = 3

Query:  534 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDIEGIPPDQQRLIFAGSSSRMGR 695
            MQIFVKTLTGKTITLEVE SDTI+NV AKIQD EGIPPDQQRLIFAG     GR
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 4 Score: 24.2534 bits (51), Expect = 2.904e-18
Identity = 9/16 (56.25%), Postives = 13/16 (81.25%), Query Frame = 2

Query:  674 QQLEDGPTLADYTFKR 721
            +QLEDG TL+DY  ++
Sbjct:   48 KQLEDGRTLSDYNIQK 63

HSP 5 Score: 20.4014 bits (41), Expect = 2.904e-18
Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 1

Query:  709 HIQKESTLH 735
            +IQKESTLH
Sbjct:   60 NIQKESTLH 68

[Close]

BLAST of EY649977 vs. ExPASy Swiss-Prot
Match: UBIQ_OPHHA (Ubiquitin OS=Ophiophagus hannah PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.032e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:   78 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 305
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.976 bits (367), Expect = 3.032e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  306 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 533
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 88.1965 bits (217), Expect = 2.904e-18
Identity = 45/54 (83.33%), Postives = 46/54 (85.19%), Query Frame = 3

Query:  534 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDIEGIPPDQQRLIFAGSSSRMGR 695
            MQIFVKTLTGKTITLEVE SDTI+NV AKIQD EGIPPDQQRLIFAG     GR
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 4 Score: 24.2534 bits (51), Expect = 2.904e-18
Identity = 9/16 (56.25%), Postives = 13/16 (81.25%), Query Frame = 2

Query:  674 QQLEDGPTLADYTFKR 721
            +QLEDG TL+DY  ++
Sbjct:   48 KQLEDGRTLSDYNIQK 63

HSP 5 Score: 20.4014 bits (41), Expect = 2.904e-18
Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 1

Query:  709 HIQKESTLH 735
            +IQKESTLH
Sbjct:   60 NIQKESTLH 68

[Close]

BLAST of EY649977 vs. ExPASy Swiss-Prot
Match: UBIQ_MOUSE (Ubiquitin OS=Mus musculus GN=Rps27a PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.032e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:   78 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 305
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.976 bits (367), Expect = 3.032e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  306 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 533
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 88.1965 bits (217), Expect = 2.904e-18
Identity = 45/54 (83.33%), Postives = 46/54 (85.19%), Query Frame = 3

Query:  534 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDIEGIPPDQQRLIFAGSSSRMGR 695
            MQIFVKTLTGKTITLEVE SDTI+NV AKIQD EGIPPDQQRLIFAG     GR
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 4 Score: 24.2534 bits (51), Expect = 2.904e-18
Identity = 9/16 (56.25%), Postives = 13/16 (81.25%), Query Frame = 2

Query:  674 QQLEDGPTLADYTFKR 721
            +QLEDG TL+DY  ++
Sbjct:   48 KQLEDGRTLSDYNIQK 63

HSP 5 Score: 20.4014 bits (41), Expect = 2.904e-18
Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 1

Query:  709 HIQKESTLH 735
            +IQKESTLH
Sbjct:   60 NIQKESTLH 68

[Close]

BLAST of EY649977 vs. ExPASy Swiss-Prot
Match: UBIQ_MANSE (Ubiquitin OS=Manduca sexta PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.032e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:   78 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 305
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.976 bits (367), Expect = 3.032e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  306 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 533
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 88.1965 bits (217), Expect = 2.904e-18
Identity = 45/54 (83.33%), Postives = 46/54 (85.19%), Query Frame = 3

Query:  534 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDIEGIPPDQQRLIFAGSSSRMGR 695
            MQIFVKTLTGKTITLEVE SDTI+NV AKIQD EGIPPDQQRLIFAG     GR
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 4 Score: 24.2534 bits (51), Expect = 2.904e-18
Identity = 9/16 (56.25%), Postives = 13/16 (81.25%), Query Frame = 2

Query:  674 QQLEDGPTLADYTFKR 721
            +QLEDG TL+DY  ++
Sbjct:   48 KQLEDGRTLSDYNIQK 63

HSP 5 Score: 20.4014 bits (41), Expect = 2.904e-18
Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 1

Query:  709 HIQKESTLH 735
            +IQKESTLH
Sbjct:   60 NIQKESTLH 68

[Close]

BLAST of EY649977 vs. ExPASy Swiss-Prot
Match: UBIQ_MACFA (Ubiquitin OS=Macaca fascicularis GN=UBA52 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.032e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:   78 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 305
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.976 bits (367), Expect = 3.032e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  306 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 533
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 88.1965 bits (217), Expect = 2.904e-18
Identity = 45/54 (83.33%), Postives = 46/54 (85.19%), Query Frame = 3

Query:  534 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDIEGIPPDQQRLIFAGSSSRMGR 695
            MQIFVKTLTGKTITLEVE SDTI+NV AKIQD EGIPPDQQRLIFAG     GR
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 4 Score: 24.2534 bits (51), Expect = 2.904e-18
Identity = 9/16 (56.25%), Postives = 13/16 (81.25%), Query Frame = 2

Query:  674 QQLEDGPTLADYTFKR 721
            +QLEDG TL+DY  ++
Sbjct:   48 KQLEDGRTLSDYNIQK 63

HSP 5 Score: 20.4014 bits (41), Expect = 2.904e-18
Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 1

Query:  709 HIQKESTLH 735
            +IQKESTLH
Sbjct:   60 NIQKESTLH 68

[Close]

BLAST of EY649977 vs. ExPASy Swiss-Prot
Match: UBIQ_ICTPU (Ubiquitin OS=Ictalurus punctatus GN=rps27a PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.032e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:   78 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 305
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.976 bits (367), Expect = 3.032e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  306 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 533
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 88.1965 bits (217), Expect = 2.904e-18
Identity = 45/54 (83.33%), Postives = 46/54 (85.19%), Query Frame = 3

Query:  534 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDIEGIPPDQQRLIFAGSSSRMGR 695
            MQIFVKTLTGKTITLEVE SDTI+NV AKIQD EGIPPDQQRLIFAG     GR
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54

HSP 4 Score: 24.2534 bits (51), Expect = 2.904e-18
Identity = 9/16 (56.25%), Postives = 13/16 (81.25%), Query Frame = 2

Query:  674 QQLEDGPTLADYTFKR 721
            +QLEDG TL+DY  ++
Sbjct:   48 KQLEDGRTLSDYNIQK 63

HSP 5 Score: 20.4014 bits (41), Expect = 2.904e-18
Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 1

Query:  709 HIQKESTLH 735
            +IQKESTLH
Sbjct:   60 NIQKESTLH 68

The following BLAST results are available for this feature:

BLAST of EY649977 vs. ExPASy Swiss-Prot

BLAST of EY649977 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99


Match Name	E-value	Identity	Description
UBIQ_RABIT	3.032e-34	96.05	Ubiquitin OS=Oryctolagus cuniculus PE=1 SV=1	[more]
UBIQ_PONPY	3.032e-34	96.05	Ubiquitin OS=Pongo pygmaeus GN=UBA52 PE=3 SV=2	[more]
UBIQ_PLUXY	3.032e-34	96.05	Ubiquitin OS=Plutella xylostella PE=3 SV=1	[more]
UBIQ_PIG	3.032e-34	96.05	Ubiquitin OS=Sus scrofa GN=UBA52 PE=3 SV=1	[more]
UBIQ_PANTR	3.032e-34	96.05	Ubiquitin OS=Pan troglodytes GN=UBB PE=1 SV=2	[more]
UBIQ_OPHHA	3.032e-34	96.05	Ubiquitin OS=Ophiophagus hannah PE=3 SV=1	[more]
UBIQ_MOUSE	3.032e-34	96.05	Ubiquitin OS=Mus musculus GN=Rps27a PE=1 SV=1	[more]
UBIQ_MANSE	3.032e-34	96.05	Ubiquitin OS=Manduca sexta PE=3 SV=1	[more]
UBIQ_MACFA	3.032e-34	96.05	Ubiquitin OS=Macaca fascicularis GN=UBA52 PE=3 SV=...	[more]
UBIQ_ICTPU	3.032e-34	96.05	Ubiquitin OS=Ictalurus punctatus GN=rps27a PE=3 SV...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C1-100-005-G05-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY649977 ID=EY649977; Name=EY649977; organism=Citrus sinensis; type=EST; length=948bp
ATTAAACCAATAAAAAAAAAAAAGAACAAAAAAGAGTTTAGTTTAGATAC
CGAGGCTCCCAATCTCAGCCTTCCAACATGCAGATCTTTGTGAAAACTTT
GACCGGCAAGACCATCACTCTCGAGGTGGAGAGCTCCGACACGATCGACA
ACGTCAAGGCTAAGATCCAGGACAAGGAAGGGATTCCACCGGACCAGCAG
CGGCTGATCTTCGCCGGAAAGCAGCTCGAGGACGGGCGCACCTTGGCGGA
TTACAACATCCAGAAGGAGTCGACTCTCCACCTCGTCCTCCGTCTCCGCG
GCGGCATGCAGATCTTCGTCAAGACTCTGACCGGGAAGACGATCACCCTG
GAGGTGGAGAGCTCCGACACGATCGACAACGTGAAGGCGAAGATCCAGGA
CAAGGAAGGGATCCCCCCGGACCAGCAGAGGCTCATCTTCGCCGGCAAGC
AGCTGGAGGACGGCCGCACCCTGGCCGATTATAACATCCAGAAGGAATCC
ACGCTCCACCTTGTGTTGCGCCTGAGGGGAGGAATGCAGATCTTCGTCAA
GACGTTGACCGGGAAGACGATCACCCTGGAGGTGGAGAGCTCCGACACGA
TCGACAACGTGAATGCCAAGATCCAGGACATAGAGGGGATTCCTCCGGAC
CAGCAGAGGCTCATCTTCGCCGGCAGCAGCTCGAGGATGGGCCGACTCTC
GCCGATTACACATTCAAAAGGAGTCCACTCTNCACCTTGTCCTCGTCTNC
GGGGGTGGTGACTNCTAAAAAATAATGTGGGATGTGTCCGCGTTTGATTG
GATGGCGCTATNATATTAATTAGGTTGGATGGGGCGCCTTGCTTTATNAT
TTTGTAATACAATGGGGTATGGGCANCCGNTGGGCCTAATNNNCTCTCCA
TGGNAATATAATTAGGCCCTAGTTTTAATTTAAAAAAAAAAAAGGGCG