EY649970

Overview
NameEY649970
Unique NameEY649970
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY649970 vs. ExPASy Swiss-Prot
Match: KCS7_ARATH (3-ketoacyl-CoA synthase 7 OS=Arabidopsis thaliana GN=KCS7 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.707e-23
Identity = 59/186 (31.72%), Postives = 98/186 (52.69%), Query Frame = 2 
Query:  134 YILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQTYSPRIMFAGREDNPTLQDGIDEMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTNKNMNAMVVTSESLSPNWYSGNDRSMILAIACF 691
            Y++D+ CY+P D          + +  +            K +  SGI +    P  +      N ++    +E  E     +  +  +  I PK IDILV N S+    PS++S IIN++ MR DIK F+L+GMGCSA ++SV++V+ + K + +  A+V++ E++SPN Y G  +SM++A   F
Sbjct:   48 YLIDFSCYQPPDFLRAPVSNFIEHLTISGVFDQESLDLQQKILERSGISDDASVPATVHE-IPPNASISAAREETHEILFAIVQDLFSKHEIDPKSIDILVSNCSLFCPSPSITSMIINKFGMRSDIKSFSLSGMGCSAGILSVNLVKDLMKIHGDSLALVLSMEAVSPNGYRGKCKSMLIANTIF 232

HSP 2 Score: 24.2534 bits (51), Expect = 8.707e-23
Identity = 10/16 (62.50%), Postives = 12/16 (75.00%), Query Frame = 1 
Query:  679 NCLFRSGGAVILLSTK 726
            N +FR GGA ILLS +
Sbjct:  229 NTIFRMGGAAILLSNR 244
The following BLAST results are available for this feature:
BLAST of EY649970 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
KCS7_ARATH8.707e-2331.723-ketoacyl-CoA synthase 7 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-005-F07-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649970 ID=EY649970; Name=EY649970; organism=Citrus sinensis; type=EST; length=905bp
CAAAAACACAAACCAGTCTCTTTATTTTTTCTGCTCTCTCATGGGGCTTC
TCTTTTATCTCTACCTTCTCCCTTCTTTGTACCTCATGTTCAAGATATGG
AAGTGGGTTGATGAGAAAAGAGACAAAGAATGTTACATACTAGACTACCA
ATGCTACAAACCGACCGATGATAGAATGGTGAGCACTGATTTCGCTGGTC
AAGTCATAAAGAGGACAAAGAATCTTGGCCTCAACGAGTACAAATTTCTC
TTAAAAGCGATCGTTAGCTCCGGCATCGGCGAGCAAACATATTCTCCAAG
AATTATGTTCGCCGGCAGAGAAGACAACCCTACATTGCAAGATGGGATCG
ACGAGATGGAAGAATTTTTTGAAGACAGCATTGCAAAAATCTTGGACAGG
TCAGGCATTTCCCCTAAAGAAATTGACATCCTTGTTGTTAATATCTCAAT
GATAGCCATAATGCCTTCTTTATCCTCTAGAATAATTAATCGTTACAAGA
TGAGAAAGGACATAAAGGTCTTTAATCTAACCGGAATGGGCTGTAGTGCA
AGCTTAATATCGGTTGATATTGTGCGTAGCGTGTTTAAGACCAATAAAAA
TATGAATGCTATGGTCGTGACATCGGAGTCTTTGAGTCCAAATTGGTATT
CGGGCAATGATAGATCGATGATTCTTGCAATTGCCTGTTTCGTTCCGGTG
GTGCTGTGATTCTTTTGTCTACAAAAGATCCTTGGAGCGAATGCACTGTT
ANNATTGAGTGTCTAGTGAGGAACACCACNGAGCAGAGATGACTTAACNG
ATGNTGCGTACAACTGAAGATGACAGGNCGNCCAGGGTTCATCTCGGGAA
GATCTCCAAGGCACACTAGGGNCTTTGTGGACATCTTAGGGTATTCCCCT
ATGAC
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