EY649968

Overview
NameEY649968
Unique NameEY649968
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649968 vs. ExPASy Swiss-Prot
Match: MYB5_ARATH (Transcription repressor MYB5 OS=Arabidopsis thaliana GN=MYB5 PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.770e-38
Identity = 78/130 (60.00%), Postives = 94/130 (72.31%), Query Frame = 3
Query:   12 EEDEILTKYIRANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEETIVKLHSSLGNRWSLIAAQLPGRTDNEIKNYWNSHLSRKTFSFTGPADDPLTSDDLSNNGI-----KLAGGCK 386
            EEDEIL  +I+  GEG WRSLPK AGLLRCGKSCRLRW+NYLR  +KRG IT++EE+ I++LH  LGNRWSLIA ++PGRTDNEIKNYWN+HL +K         DP T   L  N I     +++GG K
Sbjct:   31 EEDEILVSFIKKEGEGRWRSLPKRAGLLRCGKSCRLRWMNYLRPSVKRGGITSDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLRKKLLR---QGIDPQTHKPLDANNIHKPEEEVSGGQK 157          
BLAST of EY649968 vs. ExPASy Swiss-Prot
Match: MYB4_ORYSJ (Myb-related protein Myb4 OS=Oryza sativa subsp. japonica GN=MYB4 PE=2 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 6.725e-38
Identity = 86/191 (45.03%), Postives = 110/191 (57.59%), Query Frame = 3
Query:   12 EEDEILTKYIRANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEETIVKLHSSLGNRWSLIAAQLPGRTDNEIKNYWNSHLSRKTFSFTGPADDPLTSDDLSNNGIKLAGGCKRRKGRTSKVNSKKHKLALASIGMPKTKRGTISEVLDQQVTADENKSSIGQVSCMASDEFCCGEASS 584
            EED++L  +I+ +G G+WR+LPK AGLLRCGKSCRLRWINYLR D+KRGN + EEE+TI+ LH  LGNRWS IAA+LPGRTDNEIKN W++HL ++              D  +  G   A G K+ K    K  S K   A A+      +R   S V +  + +   +         AS   C  E SS
Sbjct:   20 EEDKVLVAHIQRHGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEDTIIHLHELLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRL-------------DAPAQGGHVAASGGKKHK----KPKSAKKPAAAAAAPPASPERSASSSVTESSMASSVAEEHGNAGISSASASVCAKEESS 193          
BLAST of EY649968 vs. ExPASy Swiss-Prot
Match: MYB39_ARATH (Transcription factor MYB39 OS=Arabidopsis thaliana GN=MYB39 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.074e-35
Identity = 70/116 (60.34%), Postives = 86/116 (74.14%), Query Frame = 3
Query:   12 EEDEILTKYIRANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEETIVKLHSSLGNRWSLIAAQLPGRTDNEIKNYWNSHLSRKTFSFTGPADDPLTSDDLSNN 359
            EED+ LT YI  NG G+WRSLPK AGL RCGKSCRLRW+NYLR D++RG  +  EE TIV+LH+ LGN+WS IA  LPGRTDNEIKNYWN+H+ +K         DP+T +  +N+
Sbjct:   21 EEDDKLTAYINENGYGNWRSLPKLAGLNRCGKSCRLRWMNYLRPDIRRGKFSDGEESTIVRLHALLGNKWSKIAGHLPGRTDNEIKNYWNTHMRKKLLQM---GIDPVTHEPRTND 133          
BLAST of EY649968 vs. ExPASy Swiss-Prot
Match: MYBC_MAIZE (Anthocyanin regulatory C1 protein OS=Zea mays GN=C1 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.832e-35
Identity = 66/106 (62.26%), Postives = 85/106 (80.19%), Query Frame = 3
Query:    6 AW--EEDEILTKYIRANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEETIVKLHSSLGNRWSLIAAQLPGRTDNEIKNYWNSHLSRKTFSFTG 317
            AW  +ED+ L  Y++A+GEG WR +P+ AGL RCGKSCRLRW+NYLR +++RGNI+ +EE+ I++LH  LGNRWSLIA +LPGRTDNEIKNYWNS L R+  +  G
Sbjct:   16 AWTSKEDDALAAYVKAHGEGKWREVPQKAGLRRCGKSCRLRWLNYLRPNIRRGNISYDEEDLIIRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNSTLGRRAGAGAG 121          
BLAST of EY649968 vs. ExPASy Swiss-Prot
Match: MYB1_MAIZE (Myb-related protein Zm1 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.124e-35
Identity = 68/96 (70.83%), Postives = 78/96 (81.25%), Query Frame = 3
Query:   12 EEDEILTKYIRANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEETIVKLHSSLGNRWSLIAAQLPGRTDNEIKNYWNSHLSRK 299
            +ED  L  YI+ +G  +WR+LPK AGLLRCGKSCRLRWINYLR DLKRGN T EEEE I++LH  LGN+WS IAA LPGRTDNEIKN WN+HL +K
Sbjct:   22 QEDMRLIAYIQKHGHTNWRALPKQAGLLRCGKSCRLRWINYLRPDLKRGNFTDEEEEAIIRLHGLLGNKWSKIAACLPGRTDNEIKNVWNTHLKKK 117          
BLAST of EY649968 vs. ExPASy Swiss-Prot
Match: TT2_ARATH (Transcription factor TT2 OS=Arabidopsis thaliana GN=TT2 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.645e-34
Identity = 66/100 (66.00%), Postives = 81/100 (81.00%), Query Frame = 3
Query:    6 AW--EEDEILTKYIRANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEETIVKLHSSLGNRWSLIAAQLPGRTDNEIKNYWNSHLSRK 299
            AW   ED+IL  YI  +GEG W +LP  AGL RCGKSCRLRW NYLR  +KRGNI+++EEE I++LH+ LGNRWSLIA +LPGRTDNEIKN+WNS+L ++
Sbjct:   18 AWTDHEDKILRDYITTHGEGKWSTLPNQAGLKRCGKSCRLRWKNYLRPGIKRGNISSDEEELIIRLHNLLGNRWSLIAGRLPGRTDNEIKNHWNSNLRKR 117          
BLAST of EY649968 vs. ExPASy Swiss-Prot
Match: WER_ARATH (Transcription factor WER OS=Arabidopsis thaliana GN=WER PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.695e-34
Identity = 60/96 (62.50%), Postives = 79/96 (82.29%), Query Frame = 3
Query:   12 EEDEILTKYIRANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEETIVKLHSSLGNRWSLIAAQLPGRTDNEIKNYWNSHLSRK 299
            EED+IL  Y++A+G+G W  + K  GL RCGKSCRLRW+NYL  ++KRGN T +EE+ I++LH  LGNRWSLIA ++PGRTDN++KNYWN+HLS+K
Sbjct:   24 EEDKILMDYVKAHGKGHWNRIAKKTGLKRCGKSCRLRWMNYLSPNVKRGNFTEQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKK 119          
BLAST of EY649968 vs. ExPASy Swiss-Prot
Match: MYB86_ARATH (Transcription factor MYB86 OS=Arabidopsis thaliana GN=MYB86 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.239e-33
Identity = 70/119 (58.82%), Postives = 83/119 (69.75%), Query Frame = 3
Query:   12 EEDEILTKYIRANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEETIVKLHSSLGNRWSLIAAQLPGRTDNEIKNYWNSHLSRKTFSFTGPADDPLTSDDLSNNGIK 368
            EEDE L  YI  +G G W S+PK AGL RCGKSCRLRWINYLR DLKRG  + +EE  I++LH++LGNRWS IA +LPGRTDNEIKN+WNS L +K         DP T   L  N ++
Sbjct:   20 EEDEKLLNYITRHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFSQDEESLIIELHAALGNRWSQIATRLPGRTDNEIKNFWNSCLKKK---LRRKGIDPTTHKPLITNELQ 135          
BLAST of EY649968 vs. ExPASy Swiss-Prot
Match: MYB46_ARATH (Transcription factor MYB46 OS=Arabidopsis thaliana GN=MYB46 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.924e-33
Identity = 67/123 (54.47%), Postives = 86/123 (69.92%), Query Frame = 3
Query:   12 EEDEILTKYIRANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEETIVKLHSSLGNRWSLIAAQLPGRTDNEIKNYWNSHLSRKTFSFT-------GPADDPLTSDDLSNN 359
            EED  L +Y+ +NG+G W  + KNAGL RCGKSCRLRWINYLR DLKRG  + +EE+ I++ HS LGNRWS IAA+LPGRTDNEIKN+WNS + ++    +         +  P T+ D S+N
Sbjct:   26 EEDSKLMQYMLSNGQGCWSDVAKNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEDLIIRFHSILGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKKMSDTSNLINNSSSSPNTASDSSSN 148          
BLAST of EY649968 vs. ExPASy Swiss-Prot
Match: MYB23_ARATH (Transcription factor MYB23 OS=Arabidopsis thaliana GN=MYB23 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.819e-33
Identity = 59/96 (61.46%), Postives = 77/96 (80.21%), Query Frame = 3
Query:   12 EEDEILTKYIRANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEETIVKLHSSLGNRWSLIAAQLPGRTDNEIKNYWNSHLSRK 299
            EED+IL  Y+R +G+G W  + K  GL RCGKSCRLRW+NYL  ++ RGN T +EE+ I++LH  LGNRWSLIA ++PGRTDN++KNYWN+HLS+K
Sbjct:   20 EEDKILMDYVRTHGQGHWNRIAKKTGLKRCGKSCRLRWMNYLSPNVNRGNFTDQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKK 115          
The following BLAST results are available for this feature:
BLAST of EY649968 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
MYB5_ARATH1.770e-3860.00Transcription repressor MYB5 OS=Arabidopsis thalia... [more]
MYB4_ORYSJ6.725e-3845.03Myb-related protein Myb4 OS=Oryza sativa subsp. ja... [more]
MYB39_ARATH1.074e-3560.34Transcription factor MYB39 OS=Arabidopsis thaliana... [more]
MYBC_MAIZE1.832e-3562.26Anthocyanin regulatory C1 protein OS=Zea mays GN=C... [more]
MYB1_MAIZE3.124e-3570.83Myb-related protein Zm1 OS=Zea mays PE=2 SV=1[more]
TT2_ARATH2.645e-3466.00Transcription factor TT2 OS=Arabidopsis thaliana G... [more]
WER_ARATH7.695e-3462.50Transcription factor WER OS=Arabidopsis thaliana G... [more]
MYB86_ARATH2.239e-3358.82Transcription factor MYB86 OS=Arabidopsis thaliana... [more]
MYB46_ARATH2.924e-3354.47Transcription factor MYB46 OS=Arabidopsis thaliana... [more]
MYB23_ARATH3.819e-3361.46Transcription factor MYB23 OS=Arabidopsis thaliana... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-100-005-F05-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649968 ID=EY649968; Name=EY649968; organism=Citrus sinensis; type=EST; length=868bp
CGGACGCGTGGGAAGAAGATGAAATTTTGACTAAATACATTCGAGCCAAT
GGAGAAGGATCTTGGAGATCATTACCCAAAAATGCAGGTTTGTTGAGATG
TGGCAAGAGCTGTAGACTGAGATGGATAAACTACTTAAGGGCTGACCTAA
AGAGAGGAAACATCACTGCTGAAGAGGAAGAAACAATTGTTAAGCTTCAT
TCGTCTTTGGGTAACAGGTGGTCTTTGATAGCTGCACAATTACCAGGCCG
AACAGACAATGAGATAAAGAATTATTGGAACTCCCATTTAAGCAGAAAAA
CATTCAGCTTCACAGGGCCCGCAGATGATCCATTAACAAGTGATGATTTG
AGTAATAACGGTATCAAGTTAGCCGGAGGATGCAAACGGAGGAAGGGCAG
AACCAGCAAAGTGAACTCAAAAAAGCACAAACTCGCATTGGCATCAATAG
GGATGCCTAAAACTAAAAGGGGAACCATAAGTGAAGTACTTGATCAGCAA
GTGACAGCAGATGAAAATAAGAGCAGCATTGGACAAGTTTCTTGCATGGC
AAGTGATGAATTTTGCTGTGGTGAAGCAAGCAGTGATCAGGCAAGTGGAT
TGTGCCTCAGCAAGGACATTGAGAGTGAAGTATTGGGACCGTACGAGTGG
CTGGATAGTGAAATAAAGCGAGTTAACAGTAGCCTTAACAGGGAAAAATG
CAGTGCAGAAGACGAAGTGAAAAGGGACCAAGACAAATGGGCAAAAGTGA
TGAAAGGAAAGCGTTTTTTGGGGGTCTAATGAGATGAAACTGTGACACAT
TTGATCCACATGATGAATNNGTCAGCTTGATNNGAGATGGCTTGTTTTAC
TGGCANCAGTGGGGCTGA
back to top