EY649968

Overview
NameEY649968
Unique NameEY649968
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649968 vs. ExPASy Swiss-Prot
Match: MYB40_ANTMA (Myb-related protein 340 OS=Antirrhinum majus GN=MYB340 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.161e-30
Identity = 63/121 (52.07%), Postives = 83/121 (68.60%), Query Frame = 3
Query:   12 EEDEILTKYIRANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEETIVKLHSSLGNRWSLIAAQLPGRTDNEIKNYWN-----SHLSRKTFSFTGPADDPLTSDDLSNN 359
            EED IL  +I  +GEG W ++ ++AGL R GKSCRLRW+NYLR D++RGNIT EE+  I++LH+  GNRWS IA  LPGRTDNEIKNYWN      H+ +   SF G  +   +++  S +
Sbjct:   21 EEDLILINFISNHGEGVWNTIARSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNYWNRTRIQKHIKQAEASFIGHINPEHSNEQASTS 141          
BLAST of EY649968 vs. ExPASy Swiss-Prot
Match: MYB3_HORVU (Myb-related protein Hv33 OS=Hordeum vulgare GN=MYB2 PE=2 SV=3)

HSP 1 Score: 131.724 bits (330), Expect = 5.161e-30
Identity = 62/96 (64.58%), Postives = 73/96 (76.04%), Query Frame = 3
Query:   12 EEDEILTKYIRANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEETIVKLHSSLGNRWSLIAAQLPGRTDNEIKNYWNSHLSRK 299
            EEDE L  +I  +G G W S+P+ A L RCGKSCRLRWINYLR DLKRG  + +EE+ IV LH  LGNRWS IA+ LPGRTDNEIKN+WNS + +K
Sbjct:   22 EEDEKLYNHIIRHGVGCWSSVPRLAALNRCGKSCRLRWINYLRPDLKRGCFSQQEEDHIVALHQILGNRWSQIASHLPGRTDNEIKNFWNSCIKKK 117          
BLAST of EY649968 vs. ExPASy Swiss-Prot
Match: MYB05_ANTMA (Myb-related protein 305 OS=Antirrhinum majus GN=MYB305 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.161e-30
Identity = 60/95 (63.16%), Postives = 73/95 (76.84%), Query Frame = 3
Query:   12 EEDEILTKYIRANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEETIVKLHSSLGNRWSLIAAQLPGRTDNEIKNYWNSHLSR 296
            EED IL  YI  +GEG W SL ++AGL R GKSCRLRW+NYLR D++RGNIT EE+  I++LH+  GNRWS IA  LPGRTDNEIKNYW + + +
Sbjct:   21 EEDLILINYIANHGEGVWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRWSKIAKTLPGRTDNEIKNYWRTRIQK 115          
BLAST of EY649968 vs. ExPASy Swiss-Prot
Match: MYB75_ARATH (Transcription factor MYB75 OS=Arabidopsis thaliana GN=MYB75 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 6.741e-30
Identity = 57/100 (57.00%), Postives = 76/100 (76.00%), Query Frame = 3
Query:    6 AW--EEDEILTKYIRANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEETIVKLHSSLGNRWSLIAAQLPGRTDNEIKNYWNSHLSRK 299
            AW  EED +L + I   GEG W  +P  AGL RC KSCRLRW+NYL+  +KRG ++++E + +++LH  LGNRWSLIA +LPGRT N++KNYWN+HLS+K
Sbjct:   12 AWTTEEDSLLRQCINKYGEGKWHQVPVRAGLNRCRKSCRLRWLNYLKPSIKRGKLSSDEVDLLLRLHRLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKK 111          
BLAST of EY649968 vs. ExPASy Swiss-Prot
Match: MYB21_ARATH (Transcription factor MYB21 OS=Arabidopsis thaliana GN=MYB21 PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.150e-29
Identity = 59/95 (62.11%), Postives = 73/95 (76.84%), Query Frame = 3
Query:   12 EEDEILTKYIRANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEETIVKLHSSLGNRWSLIAAQLPGRTDNEIKNYWNSHLSR 296
            EED IL  YI  +G+G W SL K+AGL R GKSCRLRW+NYLR D++RGNIT EE+  I++LH+  GNRWS IA  LPGRTDNEIKN+W + + +
Sbjct:   28 EEDLILINYIANHGDGVWNSLAKSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLIIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQK 122          
BLAST of EY649968 vs. ExPASy Swiss-Prot
Match: MY114_ARATH (Transcription factor MYB114 OS=Arabidopsis thaliana GN=MYB114 PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.502e-29
Identity = 57/100 (57.00%), Postives = 75/100 (75.00%), Query Frame = 3
Query:    6 AW--EEDEILTKYIRANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEETIVKLHSSLGNRWSLIAAQLPGRTDNEIKNYWNSHLSRK 299
            AW  EED +L + I   GEG W  +P  AGL RC KSCRLRW+NYL+  +KRG  +++E + +++LH  LGNRWSLIA +LPGRT N++KNYWN+HLS+K
Sbjct:   12 AWTAEEDSLLRQCIGKYGEGKWHQVPLRAGLNRCRKSCRLRWLNYLKPSIKRGKFSSDEVDLLLRLHKLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKK 111          
BLAST of EY649968 vs. ExPASy Swiss-Prot
Match: MYB90_ARATH (Transcription factor MYB90 OS=Arabidopsis thaliana GN=MYB90 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.369e-29
Identity = 57/100 (57.00%), Postives = 74/100 (74.00%), Query Frame = 3
Query:    6 AW--EEDEILTKYIRANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEETIVKLHSSLGNRWSLIAAQLPGRTDNEIKNYWNSHLSRK 299
            AW  EED +L   I   GEG W  +P  AGL RC KSCRLRW+NYL+  +KRG ++ +E + +++LH  LGNRWSLIA +LPGRT N++KNYWN+HLS+K
Sbjct:   12 AWTAEEDSLLRLCIDKYGEGKWHQVPLRAGLNRCRKSCRLRWLNYLKPSIKRGRLSNDEVDLLLRLHKLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKK 111          
BLAST of EY649968 vs. ExPASy Swiss-Prot
Match: MY113_ARATH (Transcription factor MYB113 OS=Arabidopsis thaliana GN=MYB113 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.660e-28
Identity = 54/96 (56.25%), Postives = 72/96 (75.00%), Query Frame = 3
Query:   12 EEDEILTKYIRANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEETIVKLHSSLGNRWSLIAAQLPGRTDNEIKNYWNSHLSRK 299
            EED +L + I   GEG W  +P   GL RC KSCRLRW+NYL+  +KRG + ++E + +++LH  LGNRWSLIA +LPGRT N++KNYWN+HLS+K
Sbjct:   16 EEDILLRQCIDKYGEGKWHRVPLRTGLNRCRKSCRLRWLNYLKPSIKRGKLCSDEVDLVLRLHKLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKK 111          
BLAST of EY649968 vs. ExPASy Swiss-Prot
Match: RAX3_ARATH (Transcription factor RAX3 OS=Arabidopsis thaliana GN=RAX3 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.832e-28
Identity = 57/97 (58.76%), Postives = 73/97 (75.26%), Query Frame = 3
Query:   12 EEDEILTKYIRANGEG-SWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEETIVKLHSSLGNRWSLIAAQLPGRTDNEIKNYWNSHLSRK 299
            EED  L  YI  +G G +W +LP+  GL RCGKSCRLRW+NYLR ++K G  + EEE  I  L+ ++G+RWS+IAAQLPGRTDN+IKNYWN+ L +K
Sbjct:   20 EEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEENIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKK 116          
BLAST of EY649968 vs. ExPASy Swiss-Prot
Match: RAX1_ARATH (Transcription factor RAX1 OS=Arabidopsis thaliana GN=RAX1 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.406e-27
Identity = 57/100 (57.00%), Postives = 72/100 (72.00%), Query Frame = 3
Query:   12 EEDEILTKYIRANGEG-SWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEETIVKLHSSLGNRWSLIAAQLPGRTDNEIKNYWNSHLSRKTFS 308
            EED  L  YI   G G +W S P  AGL RCGKSCRLRW+NYLR ++K G+ + EE+  I  L +++G+RWS+IAA LPGRTDN+IKNYWN+ L +K  S
Sbjct:   20 EEDSKLRDYIEKYGNGGNWISFPLKAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLPGRTDNDIKNYWNTKLRKKLLS 119          
The following BLAST results are available for this feature:
BLAST of EY649968 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
MYB40_ANTMA5.161e-3052.07Myb-related protein 340 OS=Antirrhinum majus GN=MY... [more]
MYB3_HORVU5.161e-3064.58Myb-related protein Hv33 OS=Hordeum vulgare GN=MYB... [more]
MYB05_ANTMA5.161e-3063.16Myb-related protein 305 OS=Antirrhinum majus GN=MY... [more]
MYB75_ARATH6.741e-3057.00Transcription factor MYB75 OS=Arabidopsis thaliana... [more]
MYB21_ARATH1.150e-2962.11Transcription factor MYB21 OS=Arabidopsis thaliana... [more]
MY114_ARATH1.502e-2957.00Transcription factor MYB114 OS=Arabidopsis thalian... [more]
MYB90_ARATH4.369e-2957.00Transcription factor MYB90 OS=Arabidopsis thaliana... [more]
MY113_ARATH1.660e-2856.25Transcription factor MYB113 OS=Arabidopsis thalian... [more]
RAX3_ARATH2.832e-2858.76Transcription factor RAX3 OS=Arabidopsis thaliana ... [more]
RAX1_ARATH1.406e-2757.00Transcription factor RAX1 OS=Arabidopsis thaliana ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-100-005-F05-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649968 ID=EY649968; Name=EY649968; organism=Citrus sinensis; type=EST; length=868bp
CGGACGCGTGGGAAGAAGATGAAATTTTGACTAAATACATTCGAGCCAAT
GGAGAAGGATCTTGGAGATCATTACCCAAAAATGCAGGTTTGTTGAGATG
TGGCAAGAGCTGTAGACTGAGATGGATAAACTACTTAAGGGCTGACCTAA
AGAGAGGAAACATCACTGCTGAAGAGGAAGAAACAATTGTTAAGCTTCAT
TCGTCTTTGGGTAACAGGTGGTCTTTGATAGCTGCACAATTACCAGGCCG
AACAGACAATGAGATAAAGAATTATTGGAACTCCCATTTAAGCAGAAAAA
CATTCAGCTTCACAGGGCCCGCAGATGATCCATTAACAAGTGATGATTTG
AGTAATAACGGTATCAAGTTAGCCGGAGGATGCAAACGGAGGAAGGGCAG
AACCAGCAAAGTGAACTCAAAAAAGCACAAACTCGCATTGGCATCAATAG
GGATGCCTAAAACTAAAAGGGGAACCATAAGTGAAGTACTTGATCAGCAA
GTGACAGCAGATGAAAATAAGAGCAGCATTGGACAAGTTTCTTGCATGGC
AAGTGATGAATTTTGCTGTGGTGAAGCAAGCAGTGATCAGGCAAGTGGAT
TGTGCCTCAGCAAGGACATTGAGAGTGAAGTATTGGGACCGTACGAGTGG
CTGGATAGTGAAATAAAGCGAGTTAACAGTAGCCTTAACAGGGAAAAATG
CAGTGCAGAAGACGAAGTGAAAAGGGACCAAGACAAATGGGCAAAAGTGA
TGAAAGGAAAGCGTTTTTTGGGGGTCTAATGAGATGAAACTGTGACACAT
TTGATCCACATGATGAATNNGTCAGCTTGATNNGAGATGGCTTGTTTTAC
TGGCANCAGTGGGGCTGA
back to top