EY649968

Overview
NameEY649968
Unique NameEY649968
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649968 vs. ExPASy Swiss-Prot
Match: RAX2_ARATH (Transcription factor RAX2 OS=Arabidopsis thaliana GN=RAX2 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.836e-27
Identity = 57/104 (54.81%), Postives = 73/104 (70.19%), Query Frame = 3
Query:   12 EEDEILTKYIRANGEG-SWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEETIVKLHSSLGNRWSLIAAQLPGRTDNEIKNYWNSHLSRKTFSFTGP 320
            EED  L  YI   G G +W +LP  AGL RCGKSCRLRW+NYLR +++ G+ T EE+  I  L +S+G+RWS+IAA L GRTDN+IKNYWN+ L +K  +   P
Sbjct:   20 EEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLNYLRPNIRHGDFTEEEDNIIYSLFASIGSRWSVIAAHLQGRTDNDIKNYWNTKLKKKLIATMAP 123          
BLAST of EY649968 vs. ExPASy Swiss-Prot
Match: MYB48_ARATH (Transcription factor MYB48 OS=Arabidopsis thaliana GN=MYB48 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.651e-26
Identity = 53/118 (44.92%), Postives = 76/118 (64.41%), Query Frame = 3
Query:   12 EEDEILTKYIRANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEETIVKLHSSLGNRWSLIAAQLPGRTDNEIKNYWNSHLSRKTFSFTGPADDPLTSDDLSNNGI 365
            +ED +L  ++   G+  W  + K +GL R GKSCRLRW+NYL   LKRG +T +EE  +++LH+  GNRWS IA +LPGRTDNEIKNYW +H+ +K      P     +  + S++ +
Sbjct:   15 QEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPVSPTSSFSNCSSSSV 132          
BLAST of EY649968 vs. ExPASy Swiss-Prot
Match: MYB59_ARATH (Transcription factor MYB59 OS=Arabidopsis thaliana GN=MYB59 PE=2 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 5.905e-26
Identity = 51/96 (53.12%), Postives = 69/96 (71.88%), Query Frame = 3
Query:   12 EEDEILTKYIRANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEETIVKLHSSLGNRWSLIAAQLPGRTDNEIKNYWNSHLSRK 299
            +ED +L  ++   G+  W  + K +GL R GKSCRLRW+NYL   LKRG +T +EE  +++LH+  GNRWS IA +LPGRTDNEIKNYW +H+ +K
Sbjct:   16 QEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKK 111          
BLAST of EY649968 vs. ExPASy Swiss-Prot
Match: MYBA2_ORYSJ (Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica GN=MYBAS2 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.528e-25
Identity = 53/96 (55.21%), Postives = 67/96 (69.79%), Query Frame = 3
Query:   12 EEDEILTKYIRANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEETIVKLHSSLGNRWSLIAAQLPGRTDNEIKNYWNSHLSRK 299
            +ED  L   +R  GE  W  + K +GL R GKSCRLRW+NYL   LKRG ++  EE  I++LH+  GNRWS IA +LPGRTDNEIKNYW +H+ +K
Sbjct:   16 QEDLQLVCTVRLFGERRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGRMSPHEERLILELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKK 111          
BLAST of EY649968 vs. ExPASy Swiss-Prot
Match: MYBA1_ORYSJ (Myb-related protein MYBAS1 OS=Oryza sativa subsp. japonica GN=MYBAS1 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.481e-24
Identity = 54/113 (47.79%), Postives = 71/113 (62.83%), Query Frame = 3
Query:   12 EEDEILTKYIRANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEETIVKLHSSLGNRWSLIAAQLPGRTDNEIKNYWNSHLSRKTFSFTGPADDPLTSDDL 350
            +ED  L   +R  G+  W  + K +GL R GKSCRLRW+NYL   LK G ++ +EE  I++LH+  GNRWS IA +LPGRTDNEIKNYW +H+ +K     G      +S  L
Sbjct:   16 QEDLQLVCTVRLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKHGRMSPKEEHLIIELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERRGDMSPSSSSSSL 128          
BLAST of EY649968 vs. ExPASy Swiss-Prot
Match: MY104_ARATH (Transcription factor MYB104 OS=Arabidopsis thaliana GN=MYB104 PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 7.982e-23
Identity = 47/95 (49.47%), Postives = 65/95 (68.42%), Query Frame = 3
Query:   12 EEDEILTKYIRANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEETIVKLHSSLGNRWSLIAAQLPGRTDNEIKNYWNSHLSR 296
            EED IL  Y+   G+ +W  +PK  GL     SCR RW+N+L+  LK+G  T EEE+ +++LH+ LGN+WS +A + PGRTDNEIKN+WN+   R
Sbjct:   24 EEDRILKDYVIQYGDRTWTHVPKRTGLPHNPASCRFRWMNHLKPSLKKGPFTDEEEKRVLQLHAVLGNKWSQMAREFPGRTDNEIKNFWNARRMR 118          
BLAST of EY649968 vs. ExPASy Swiss-Prot
Match: MYB44_ARATH (Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.731e-18
Identity = 45/96 (46.88%), Postives = 60/96 (62.50%), Query Frame = 3
Query:   12 EEDEILTKYIRANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEETIVKLHSSLGNRWSLIAAQLPGRTDNEIKNYWNSHLSRK 299
            EEDE L + +   G  +W  + K+    R GKSCRLRW N L   ++    +AEE+ETI + H+  GN+W+ IA  L GRTDN +KN+WNS L RK
Sbjct:   12 EEDEQLRRLVVKYGPRNWTVISKSIPG-RSGKSCRLRWCNQLSPQVEHRPFSAEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106          
BLAST of EY649968 vs. ExPASy Swiss-Prot
Match: MYB_XENLA (Myb protein OS=Xenopus laevis GN=myb PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.722e-17
Identity = 44/96 (45.83%), Postives = 60/96 (62.50%), Query Frame = 3
Query:   12 EEDEILTKYIRANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEETIVKLHSSLGNRWSLIAAQLPGRTDNEIKNYWNSHLSRK 299
            EED+ + + +   G   W  + K+    R GK CR RW N+L  ++K+ + T EE+ TI + H  LGNRW+ IA  LPGRTDN IKN+WNS + RK
Sbjct:   95 EEDQRVIELVHKYGPKRWSVIAKHLKG-RIGKQCRERWHNHLNPEVKKSSWTEEEDRTIYEAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRK 189          
BLAST of EY649968 vs. ExPASy Swiss-Prot
Match: MYBA_XENLA (Myb-related protein A OS=Xenopus laevis GN=mybl1 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.938e-17
Identity = 43/96 (44.79%), Postives = 58/96 (60.42%), Query Frame = 3
Query:   12 EEDEILTKYIRANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEETIVKLHSSLGNRWSLIAAQLPGRTDNEIKNYWNSHLSRK 299
            EED+ + + +   G   W  + K+    R GK CR RW N+L  D+K+ + T EE+  I   H  +GNRW+ IA  LPGRTDN IKN+WNS + RK
Sbjct:   92 EEDQRVIELVHKYGPKKWSIIAKHLKG-RIGKQCRERWHNHLNPDVKKSSWTEEEDRIIYSAHKRMGNRWAEIAKLLPGRTDNSIKNHWNSTMKRK 186          
BLAST of EY649968 vs. ExPASy Swiss-Prot
Match: MYB_AVIMB (Transforming protein Myb OS=Avian myeloblastosis virus GN=V-MYB PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 3.837e-17
Identity = 42/96 (43.75%), Postives = 61/96 (63.54%), Query Frame = 3
Query:   12 EEDEILTKYIRANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNITAEEEETIVKLHSSLGNRWSLIAAQLPGRTDNEIKNYWNSHLSRK 299
            EED+ + ++++  G   W  + K+    R GK CR RW N+L  ++K+ + T EE+  I + H  LGNRW+ IA  LPGRTDN +KN+WNS + RK
Sbjct:   27 EEDQRVIEHVQKYGPKRWSDIAKHLKG-RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAVKNHWNSTMRRK 121          
The following BLAST results are available for this feature:
BLAST of EY649968 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
RAX2_ARATH1.836e-2754.81Transcription factor RAX2 OS=Arabidopsis thaliana ... [more]
MYB48_ARATH2.651e-2644.92Transcription factor MYB48 OS=Arabidopsis thaliana... [more]
MYB59_ARATH5.905e-2653.13Transcription factor MYB59 OS=Arabidopsis thaliana... [more]
MYBA2_ORYSJ8.528e-2555.21Myb-related protein MYBAS2 OS=Oryza sativa subsp. ... [more]
MYBA1_ORYSJ2.481e-2447.79Myb-related protein MYBAS1 OS=Oryza sativa subsp. ... [more]
MY104_ARATH7.982e-2349.47Transcription factor MYB104 OS=Arabidopsis thalian... [more]
MYB44_ARATH7.731e-1846.88Transcription factor MYB44 OS=Arabidopsis thaliana... [more]
MYB_XENLA1.722e-1745.83Myb protein OS=Xenopus laevis GN=myb PE=2 SV=1[more]
MYBA_XENLA2.938e-1744.79Myb-related protein A OS=Xenopus laevis GN=mybl1 P... [more]
MYB_AVIMB3.837e-1743.75Transforming protein Myb OS=Avian myeloblastosis v... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-005-F05-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649968 ID=EY649968; Name=EY649968; organism=Citrus sinensis; type=EST; length=868bp
CGGACGCGTGGGAAGAAGATGAAATTTTGACTAAATACATTCGAGCCAAT
GGAGAAGGATCTTGGAGATCATTACCCAAAAATGCAGGTTTGTTGAGATG
TGGCAAGAGCTGTAGACTGAGATGGATAAACTACTTAAGGGCTGACCTAA
AGAGAGGAAACATCACTGCTGAAGAGGAAGAAACAATTGTTAAGCTTCAT
TCGTCTTTGGGTAACAGGTGGTCTTTGATAGCTGCACAATTACCAGGCCG
AACAGACAATGAGATAAAGAATTATTGGAACTCCCATTTAAGCAGAAAAA
CATTCAGCTTCACAGGGCCCGCAGATGATCCATTAACAAGTGATGATTTG
AGTAATAACGGTATCAAGTTAGCCGGAGGATGCAAACGGAGGAAGGGCAG
AACCAGCAAAGTGAACTCAAAAAAGCACAAACTCGCATTGGCATCAATAG
GGATGCCTAAAACTAAAAGGGGAACCATAAGTGAAGTACTTGATCAGCAA
GTGACAGCAGATGAAAATAAGAGCAGCATTGGACAAGTTTCTTGCATGGC
AAGTGATGAATTTTGCTGTGGTGAAGCAAGCAGTGATCAGGCAAGTGGAT
TGTGCCTCAGCAAGGACATTGAGAGTGAAGTATTGGGACCGTACGAGTGG
CTGGATAGTGAAATAAAGCGAGTTAACAGTAGCCTTAACAGGGAAAAATG
CAGTGCAGAAGACGAAGTGAAAAGGGACCAAGACAAATGGGCAAAAGTGA
TGAAAGGAAAGCGTTTTTTGGGGGTCTAATGAGATGAAACTGTGACACAT
TTGATCCACATGATGAATNNGTCAGCTTGATNNGAGATGGCTTGTTTTAC
TGGCANCAGTGGGGCTGA
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