EY649967 | Citrus Genome Database

Overview


Name	EY649967
Unique Name	EY649967
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	603

Libraries


Library Name	Type
Sweet orange leaf, greenhouse plant	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY649967 vs. ExPASy Swiss-Prot
Match: APEB_PSEU2 (Probable M18 family aminopeptidase 2 OS=Pseudomonas syringae pv. syringae (strain B728a) GN=apeB PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.469e-19
Identity = 42/93 (45.16%), Postives = 55/93 (59.14%), Query Frame = 3

Query:   87 QKVGIWXVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVNSDGFKVNTQSHLVPILATSIKEE 365
            Q+ G W +GV+ YGG L   WFDRDL++AGRV  R      G    +L+    PI  IP LAIHL+R  N +G+ +N Q+ L PILA    +E
Sbjct:   97 QRQGFWQLGVEVYGGALLAPWFDRDLSLAGRVTFRR----DGKVESQLIDFKLPIAVIPNLAIHLNRTAN-EGWAINAQNELPPILAQVAGDE 184

HSP 2 Score: 37.7354 bits (86), Expect = 3.469e-19
Identity = 14/27 (51.85%), Postives = 21/27 (77.78%), Query Frame = 2

Query:   20 GFHVVGAHTDSPCLKLKPVSKVTKGGY 100
            G  +VGAHTDSPCL++KP  ++ + G+
Sbjct:   75 GIRMVGAHTDSPCLRVKPQPELQRQGF 101

[Close]

BLAST of EY649967 vs. ExPASy Swiss-Prot
Match: APEB_PSE14 (Probable M18 family aminopeptidase 2 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=apeB PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.469e-19
Identity = 42/93 (45.16%), Postives = 55/93 (59.14%), Query Frame = 3

Query:   87 QKVGIWXVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVNSDGFKVNTQSHLVPILATSIKEE 365
            Q+ G W +GV+ YGG L   WFDRDL++AGRV  R      G    +L+    PI  IP LAIHL+R  N +G+ +N Q+ L PILA    +E
Sbjct:   97 QRQGFWQLGVEVYGGALLAPWFDRDLSLAGRVTFRR----DGKVESQLIDFKLPIAVIPNLAIHLNRTAN-EGWAINAQNELPPILAQVAGDE 184

HSP 2 Score: 37.7354 bits (86), Expect = 3.469e-19
Identity = 14/27 (51.85%), Postives = 21/27 (77.78%), Query Frame = 2

Query:   20 GFHVVGAHTDSPCLKLKPVSKVTKGGY 100
            G  +VGAHTDSPCL++KP  ++ + G+
Sbjct:   75 GIRMVGAHTDSPCLRVKPQPELQRQGF 101

[Close]

BLAST of EY649967 vs. ExPASy Swiss-Prot
Match: APEB_PSESM (Probable M18 family aminopeptidase 2 OS=Pseudomonas syringae pv. tomato GN=apeB PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.512e-19
Identity = 42/93 (45.16%), Postives = 55/93 (59.14%), Query Frame = 3

Query:   87 QKVGIWXVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVNSDGFKVNTQSHLVPILATSIKEE 365
            Q+ G W +GV+ YGG L   WFDRDL++AGRV  R      G    +L+    PI  IP LAIHL+R  N +G+ +N Q+ L PILA    +E
Sbjct:   97 QRQGFWQLGVEVYGGALLAPWFDRDLSLAGRVTFRR----DGKVESQLIDFKLPIAVIPNLAIHLNRTAN-EGWTINPQNELPPILAQVAGDE 184

HSP 2 Score: 37.7354 bits (86), Expect = 4.512e-19
Identity = 14/27 (51.85%), Postives = 21/27 (77.78%), Query Frame = 2

Query:   20 GFHVVGAHTDSPCLKLKPVSKVTKGGY 100
            G  +VGAHTDSPCL++KP  ++ + G+
Sbjct:   75 GIRMVGAHTDSPCLRVKPQPELQRQGF 101

[Close]

BLAST of EY649967 vs. ExPASy Swiss-Prot
Match: APEB_PSEFS (Probable M18 family aminopeptidase 2 OS=Pseudomonas fluorescens (strain SBW25) GN=apeB PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.512e-19
Identity = 45/103 (43.69%), Postives = 58/103 (56.31%), Query Frame = 3

Query:   87 QKVGIWXVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVNSDGFKVNTQSHLVPILATSIKEE---LNXVVTD 386
            Q+ G W +GV+ YGG L   WFDRDL++AGRV  R      G    +L+    PI  IP LAIHL+R  N  G+ +N Q+ L PILA    +E      V+TD
Sbjct:   97 QRQGFWQLGVEVYGGALLAPWFDRDLSLAGRVTFRR----DGKVESQLIDFKLPIAIIPNLAIHLNREAN-QGWAINAQTELPPILAQFAGDERVDFRAVLTD 194

HSP 2 Score: 37.7354 bits (86), Expect = 4.512e-19
Identity = 14/27 (51.85%), Postives = 21/27 (77.78%), Query Frame = 2

Query:   20 GFHVVGAHTDSPCLKLKPVSKVTKGGY 100
            G  +VGAHTDSPCL++KP  ++ + G+
Sbjct:   75 GIRLVGAHTDSPCLRVKPQPELQRQGF 101

[Close]

BLAST of EY649967 vs. ExPASy Swiss-Prot
Match: APEB_AZOVD (Probable M18 family aminopeptidase 2 OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=apeB PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.512e-19
Identity = 41/90 (45.56%), Postives = 54/90 (60.00%), Query Frame = 3

Query:   96 GIWXVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVNSDGFKVNTQSHLVPILATSIKEE 365
            G W +GV+ YGG L   WFDRDL++AGRV  R     +G    +L+   +PI  IP LAIHL+R  N  G+ +N Q+ L PILA    +E
Sbjct:  100 GFWQLGVEVYGGALLAPWFDRDLSLAGRVTFRR----AGRVESQLIDFKQPIAVIPNLAIHLNREAN-QGWAINAQNELPPILAQVAGDE 184

HSP 2 Score: 38.1206 bits (87), Expect = 4.512e-19
Identity = 14/27 (51.85%), Postives = 21/27 (77.78%), Query Frame = 2

Query:   20 GFHVVGAHTDSPCLKLKPVSKVTKGGY 100
            G  +VGAHTDSPCL++KP  ++ + G+
Sbjct:   75 GLRLVGAHTDSPCLRVKPQPELNRQGF 101

[Close]

BLAST of EY649967 vs. ExPASy Swiss-Prot
Match: APEB_STRAW (Probable M18 family aminopeptidase 2 OS=Streptomyces avermitilis GN=apeB PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 7.628e-19
Identity = 39/78 (50.00%), Postives = 56/78 (71.79%), Query Frame = 3

Query:  108 VGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVNSDGFKVNTQSHLVPI 341
            + V+ YGG L ++W DRDL +AGR+ +R+G       S +LV ID P++R+P LAIHLDR+V++DG K++ Q HL PI
Sbjct:  108 IAVEIYGGPLLNSWLDRDLGLAGRLSLRDG-------STRLVNIDRPLLRVPQLAIHLDRSVSTDGLKLDKQRHLQPI 178

HSP 2 Score: 32.3426 bits (72), Expect = 7.628e-19
Identity = 16/31 (51.61%), Postives = 21/31 (67.74%), Query Frame = 2

Query:   23 FHVVGAHTDSPCLKLKPVSKVTKGGYLXGWR 115
            F +VGAHTDSP L++KP  +   G +  GWR
Sbjct:   80 FRIVGAHTDSPNLRVKP--RPDSGAH--GWR 106

[Close]

BLAST of EY649967 vs. ExPASy Swiss-Prot
Match: APEB_PSEPG (Probable M18 family aminopeptidase 2 OS=Pseudomonas putida (strain GB-1) GN=apeB PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.290e-18
Identity = 41/93 (44.09%), Postives = 54/93 (58.06%), Query Frame = 3

Query:   87 QKVGIWXVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVNSDGFKVNTQSHLVPILATSIKEE 365
            Q+ G   +GV+ YGG L   WFDRDL++AGRV  R      G    +L+    PI  IP LAIHL+R  N +G+ +N Q+ L PILA    +E
Sbjct:   97 QRQGFLQLGVEVYGGALLAPWFDRDLSLAGRVTYRR----DGKVESQLIDFKLPIAIIPNLAIHLNRTAN-EGWAINPQNELPPILAQVAGDE 184

HSP 2 Score: 41.5874 bits (96), Expect = 1.290e-18
Identity = 16/29 (55.17%), Postives = 23/29 (79.31%), Query Frame = 2

Query:   17 NGFHVVGAHTDSPCLKLKPVSKVTKGGYL 103
            NG  +VGAHTDSPCL++KP  ++ + G+L
Sbjct:   74 NGIRMVGAHTDSPCLRVKPQPELQRQGFL 102

[Close]

BLAST of EY649967 vs. ExPASy Swiss-Prot
Match: APEB_PSEP1 (Probable M18 family aminopeptidase 2 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=apeB PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.290e-18
Identity = 41/93 (44.09%), Postives = 54/93 (58.06%), Query Frame = 3

Query:   87 QKVGIWXVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVNSDGFKVNTQSHLVPILATSIKEE 365
            Q+ G   +GV+ YGG L   WFDRDL++AGRV  R      G    +L+    PI  IP LAIHL+R  N +G+ +N Q+ L PILA    +E
Sbjct:   97 QRQGFLQLGVEVYGGALLAPWFDRDLSLAGRVTYRR----DGKVESQLIDFKLPIAIIPNLAIHLNRTAN-EGWAINPQNELPPILAQVAGDE 184

HSP 2 Score: 41.5874 bits (96), Expect = 1.290e-18
Identity = 16/29 (55.17%), Postives = 23/29 (79.31%), Query Frame = 2

Query:   17 NGFHVVGAHTDSPCLKLKPVSKVTKGGYL 103
            NG  +VGAHTDSPCL++KP  ++ + G+L
Sbjct:   74 NGIRMVGAHTDSPCLRVKPQPELQRQGFL 102

[Close]

BLAST of EY649967 vs. ExPASy Swiss-Prot
Match: APEB_STRCO (Probable M18 family aminopeptidase 2 OS=Streptomyces coelicolor GN=apeB PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.677e-18
Identity = 39/87 (44.83%), Postives = 61/87 (70.11%), Query Frame = 3

Query:  108 VGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVNSDGFKVNTQSHLVPI--LATSIKE 362
            V V+ YGG L ++W DRDL +AGR+ +R+G       S +LV +D P++R+P LAIH+DRNV+++G K++ Q HL P+  L  S+++
Sbjct:  108 VAVEIYGGPLMNSWLDRDLGLAGRLSLRDG-------STRLVDVDRPLLRVPQLAIHMDRNVSTEGLKLDKQRHLQPVWGLGDSVRD 187

HSP 2 Score: 31.9574 bits (71), Expect = 1.677e-18
Identity = 16/31 (51.61%), Postives = 21/31 (67.74%), Query Frame = 2

Query:   23 FHVVGAHTDSPCLKLKPVSKVTKGGYLXGWR 115
            F +VGAHTDSP L++KP  +   G +  GWR
Sbjct:   80 FRIVGAHTDSPNLRVKP--RPDTGAH--GWR 106

[Close]

BLAST of EY649967 vs. ExPASy Swiss-Prot
Match: APEB_PSEMY (Probable M18 family aminopeptidase 2 OS=Pseudomonas mendocina (strain ymp) GN=apeB PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.678e-18
Identity = 41/93 (44.09%), Postives = 54/93 (58.06%), Query Frame = 3

Query:   87 QKVGIWXVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVNSDGFKVNTQSHLVPILATSIKEE 365
            Q+ G + +GV+ YGG L   WFDRDL++AGRV  R      G    +L+   +PI  IP LAIHL+R  N  G+ +N Q+ L PILA     E
Sbjct:   97 QRQGYFQLGVEVYGGALLAPWFDRDLSLAGRVTYRR----DGKVESQLIDFYQPIAVIPNLAIHLNREANM-GWAINAQNELPPILAQLASSE 184

HSP 2 Score: 40.0466 bits (92), Expect = 1.678e-18
Identity = 16/31 (51.61%), Postives = 22/31 (70.97%), Query Frame = 2

Query:    8 VAGNGFHVVGAHTDSPCLKLKPVSKVTKGGY 100
            V   G  +VGAHTDSPCL++KP  ++ + GY
Sbjct:   71 VVEGGIRLVGAHTDSPCLRVKPSPELQRQGY 101

The following BLAST results are available for this feature:

BLAST of EY649967 vs. ExPASy Swiss-Prot

BLAST of EY649967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34


Match Name	E-value	Identity	Description
APEB_PSEU2	3.469e-19	45.16	Probable M18 family aminopeptidase 2 OS=Pseudomona...	[more]
APEB_PSE14	3.469e-19	45.16	Probable M18 family aminopeptidase 2 OS=Pseudomona...	[more]
APEB_PSESM	4.512e-19	45.16	Probable M18 family aminopeptidase 2 OS=Pseudomona...	[more]
APEB_PSEFS	4.512e-19	43.69	Probable M18 family aminopeptidase 2 OS=Pseudomona...	[more]
APEB_AZOVD	4.512e-19	45.56	Probable M18 family aminopeptidase 2 OS=Azotobacte...	[more]
APEB_STRAW	7.628e-19	50.00	Probable M18 family aminopeptidase 2 OS=Streptomyc...	[more]
APEB_PSEPG	1.290e-18	44.09	Probable M18 family aminopeptidase 2 OS=Pseudomona...	[more]
APEB_PSEP1	1.290e-18	44.09	Probable M18 family aminopeptidase 2 OS=Pseudomona...	[more]
APEB_STRCO	1.677e-18	44.83	Probable M18 family aminopeptidase 2 OS=Streptomyc...	[more]
APEB_PSEMY	1.678e-18	44.09	Probable M18 family aminopeptidase 2 OS=Pseudomona...	[more]

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Properties


Property Name	Value
Genbank description	CS00-C1-100-005-F04-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY649967 ID=EY649967; Name=EY649967; organism=Citrus sinensis; type=EST; length=603bp
AAAATATGTTGCTGGGAATGGATTCCATGTAGTCGGTGCTCATACTGACA
GTCCTTGCCTAAAGCTGAAGCCTGTTTCTAAGGTAACAAAAGGTGGGTAT
TTGGNAGGTTGGCGTCCAAACATATGGAGGTGGTTTGTGGCATACGTGGT
TCGACCGTGACTTGACAGTTGCAGGAAGGGTGATAATTAGAGAAGGGAAA
GATGGTTCTGGTCCCTATTCTCATAAACTAGTTAGAATTGACGAACCCAT
AATGCGAATTCCTACACTGGCAATTCACTTGGACAGGAATGTTAATTCTG
ATGGATTTAAGGTGAACACCCAGAGTCATCTTGTTCCCATCTTGGCAACA
TCAATAAAGGAGGAGCTTAATNAAGTGGTCACAGACAGCCCTAATGAAAG
AACAGACACTTACAGCTCAAAGCATCATTCGCATCTGCTACAGATGAATT
GCAGTCAGATCGGCTGCAGACAGATGATATATNNGTGATTTTGATTTGCA
GCATGTGATACTCAGCCAGTATAGTAGCTGGTATTAAGAAGGAATTNCAT
TTCTCAGGAAGCTCGACATCTCTGCATGTATTCTGCTCTTGAAGGCATNG
ATA