EY649937

Overview
NameEY649937
Unique NameEY649937
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length937
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY649937 vs. ExPASy Swiss-Prot
Match: PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.714e-11
Identity = 46/145 (31.72%), Postives = 66/145 (45.52%), Query Frame = 2 
Query:  245 VFAICFVAFLCFWTTANGLLSAKGVNYEVQALMGV-KHSLHDPHGVLENWDEDAVD--PCSWTMVTCSPESLVIGLGIPSQNLSGTLSPSIGXXXXXXXXXXXXXXXXGPIPAEIGRLTKLQTLDLSNNFFTGEIPSSLGHLRSL 670
            +F I  + F  F +T   ++S   +N +   L+ + KH    P  V   W  +A +  PC+W  +TC     V  L      +SG L P IG                G IP+ +G  TKL TLDLS N F+ +IP +L  L+ L
Sbjct:    7 LFKILLLFFCLFLSTH--IISVSCLNSDGLTLLSLLKHLDRVPPQVTSTWKINASEATPCNWFGITCDDSKNVASLNFTRSRVSGQLGPEIGELKSLQILDLSTNNFSGTIPSTLGNCTKLATLDLSENGFSDKIPDTLDSLKRL 149

HSP 2 Score: 20.4014 bits (41), Expect = 4.714e-11
Identity = 6/10 (60.00%), Postives = 9/10 (90.00%), Query Frame = 3 
Query:  759 YXNLSGPVPR 788
            Y NL+GP+P+
Sbjct:  180 YNNLTGPIPQ 189
The following BLAST results are available for this feature:
BLAST of EY649937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
PEPR1_ARATH4.714e-1131.72Leucine-rich repeat receptor-like protein kinase P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-005-C05-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649937 ID=EY649937; Name=EY649937; organism=Citrus sinensis; type=EST; length=937bp
ATAAAAACTGTGTGTTTTTTCTTGGGTTCTGACACAAGATTTAGTAGATG
GATTTCTGCCATGGAAAGCAGCAACTGAGTTTTGATCTATGCATTTCTTT
GAGCCAAAGAAACTCAGTTCAAAGCTTGTTTTGTCACCTATAGTTAGTGG
CTAGACAGCCTAAGTAAATCACCAGCAGGCTTTTGCAGCTGGGATTTTCT
AGTTTTTATCAAATTCAAAATCAAAGGAAATGGCCATAAGGGAAGTTTTT
GCTATTTGTTTTGTGGCTTTCTTGTGCTTTTGGACTACTGCAAATGGATT
GTTATCTGCTAAAGGTGTTAATTATGAAGTGCAAGCTTTAATGGGTGTAA
AGCACTCACTACATGATCCTCATGGTGTTCTTGAAAACTGGGATGAGGAT
GCTGTTGATCCGTGTAGCTGGACTATGGTTACTTGTTCTCCCGAGAGCTT
GGTCATTGGCCTAGGAATTCCTAGCCAGAATTTGTCTGGTACTCTTTCTC
CGAGCATTGGCAACTTGACAAATCTTCAGATTGTGCTCTTACAGAATAAC
AACATAACTGGACCAATTCCTGCTGAGATTGGCAGACTCACAAAGCTTCA
AACACTTGATCTTTCGAATAATTTCTTTACTGGGGAAATTCCTTCCTCTC
TAGGCCACTTAAGAAGTCTCCATACANTGAGGTTTATAATAACAGTCTCT
CTGGTGCATTTNCGACATCGCTGGCTAGCATGACTCAGCTTATCTTTCTT
TGACTGNCTACNATAATTTGAGTGGCCCTGTACCCAGATTTTCTGCCAAA
CATNNTACATTGNTGGGCACCCTCTGATCTGTGCCACGGGNTCTGAACCA
GATTGCTAGGGACACACTAATGCCATGTCCATGAAACTGATAGCTACAAA
CTGCTNCACAGCAGAACTAGAGTACAATTATCCTTGA
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