EY649936
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649936 vs. ExPASy Swiss-Prot
Match: UCRIA_CYAPA (Cytochrome b6-f complex iron-sulfur subunit 1, cyanelle OS=Cyanophora paradoxa GN=petC-1 PE=2 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 1.036e-63 Identity = 116/183 (63.39%), Postives = 139/183 (75.96%), Query Frame = 3 Query: 141 IKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGL*S-AGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQ*RVVRGPAPLSLALAHANV-ENGKVVFVPWTETDFRTGEAPWW 683 + C A S D VPDMGKR+LMNLLLLGA++ P P+ +F PP AG G AKDA+GND+ + WL TH PGDR+L +GLKGD TYL+V++D TL +YG+NAVCTHLGCVVPWN++ENKF+CPCHGSQY+ +VVRGPAPLSLALAH +V E+G V F PWTETDFRT APWW Sbjct: 59 VSCSAAS---DDVPDMGKRKLMNLLLLGAIAGPVAGAGGPFVSFLVPPKAGGGAGAGQAAKDALGNDVKVSSWLETHKPGDRSLAQGLKGDATYLIVKEDGTLENYGLNAVCTHLGCVVPWNASENKFMCPCHGSQYDRTGKVVRGPAPLSLALAHVSVLEDGVVAFEPWTETDFRTNTAPWW 238
BLAST of EY649936 vs. ExPASy Swiss-Prot
Match: UCRI_TRIEI (Cytochrome b6-f complex iron-sulfur subunit OS=Trichodesmium erythraeum (strain IMS101) GN=petC PE=3 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 2.308e-63 Identity = 110/169 (65.09%), Postives = 130/169 (76.92%), Query Frame = 3 Query: 177 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGL*SAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQ*RVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWW 683 VP MG+RQ MNLL G V+ L P +F PP +GGG TAKDA+GNDII +++L H G+RTL +GLKGDPTY+V+E ++TLA YG+NAVCTHLGCVVPWN +ENKFICPCHGSQY+N +VVRGPAPLSLAL HANV + K+VF W ETDFRTGE PWW Sbjct: 10 VPSMGRRQFMNLLTFGTVTGVALGALYPVVNYFIPPSSGGSGGGVTAKDALGNDIIVSEFLANHNSGERTLAQGLKGDPTYVVIEGEQTLAEYGLNAVCTHLGCVVPWNGSENKFICPCHGSQYDNTGKVVRGPAPLSLALVHANVSDDKLVFTQWEETDFRTGEKPWW 178
BLAST of EY649936 vs. ExPASy Swiss-Prot
Match: UCRIA_CHLRE (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Chlamydomonas reinhardtii GN=petC PE=1 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 3.936e-63 Identity = 115/198 (58.08%), Postives = 139/198 (70.20%), Query Frame = 3 Query: 96 PARTQMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGL*SAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQ*RVVRGPAPLSLALAHANV-ENGKVVFVPWTETDFRTGEAPWWA 686 PA+ + ++ + ++ A S VPDM KR +MNL+L G LP + + Y FF PP GGG AKDA+GNDI A +WL TH GDR+L++GLKGDPTYL+V D T+ YG+NAVCTHLGCVVPW +AENKF CPCHGSQYN + +VVRGPAPLSLALAH +V E+G V F WTETDFRTG PWWA Sbjct: 12 PAKASAIRRSRVMPVVRAAAAS---SEVPDMNKRNIMNLILAGGAGLPITTLALGYGAFFVPPSSGGGGGGQAAKDALGNDIKAGEWLKTHLAGDRSLSQGLKGDPTYLIVTADSTIEKYGLNAVCTHLGCVVPWVAAENKFKCPCHGSQYNAEGKVVRGPAPLSLALAHCDVAESGLVTFSTWTETDFRTGLEPWWA 206
BLAST of EY649936 vs. ExPASy Swiss-Prot
Match: UCRIA_VOLCA (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Volvox carteri GN=petC PE=2 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 5.141e-63 Identity = 116/198 (58.59%), Postives = 139/198 (70.20%), Query Frame = 3 Query: 96 PARTQMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGL*SAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQ*RVVRGPAPLSLALAHANV-ENGKVVFVPWTETDFRTGEAPWWA 686 P + Q ++ + ++ A S VPDM KR +MNL+LLG SLP G + + Y FF PP GG AKDA+GNDI A WL TH GDR+L++GLKGDPTYL+V D T+ YG+NAVCTHLGCVVPW +AENKF CPCHGSQYN + +VVRGPAPLSLALAH +V E+G V F W+ETDFRTG PWWA Sbjct: 12 PCKAQATRRSRVMSVVRAAAVS---SEVPDMNKRNIMNLILLGGASLPVGSLALGYGAFFVPPSSGGGSGGQAAKDALGNDIKANAWLATHQKGDRSLSQGLKGDPTYLIVTADGTIEKYGLNAVCTHLGCVVPWVAAENKFKCPCHGSQYNAEGKVVRGPAPLSLALAHCDVQEDGLVTFSTWSETDFRTGLEPWWA 206
BLAST of EY649936 vs. ExPASy Swiss-Prot
Match: UCRIA_ANAVT (Cytochrome b6-f complex iron-sulfur subunit 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=petC PE=3 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 1.496e-62 Identity = 109/170 (64.12%), Postives = 127/170 (74.71%), Query Frame = 3 Query: 177 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGL*SAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQ*RVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWWA 686 VPDMG+RQ MNLL G V+ L P +F PP AGGGTTAKD +GND+ + +L +H GDRTL +GLKGDPTY+VVE + + YGINAVCTHLGCVVPWN+AENKF CPCHGSQY+ +VVRGPAP SLAL+HA EN K+V PWTETDFRTGE PWW+ Sbjct: 10 VPDMGRRQFMNLLTFGTVTGVALGALYPVVNYFIPPATGGAGGGTTAKDELGNDVSVSKFLESHNVGDRTLVQGLKGDPTYIVVESKEAITDYGINAVCTHLGCVVPWNAAENKFKCPCHGSQYDATGKVVRGPAPKSLALSHAKTENDKIVLTPWTETDFRTGEEPWWS 179
BLAST of EY649936 vs. ExPASy Swiss-Prot
Match: UCRI_SYNP2 (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=petC PE=3 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 3.332e-62 Identity = 111/171 (64.91%), Postives = 132/171 (77.19%), Query Frame = 3 Query: 177 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGL*SAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQ*RVVRGPAPLSLALAHANV-ENGKVVFVPWTETDFRTGEAPWWA 686 VPD+G+RQ +NLL +G + L P +F PP AGGG AKDA+GNDII +D+L TH GDR+L +GLKGDPTY+VVE D T++SYGINA+CTHLGCVVPWN+AENKF+CPCHGSQY+ +VVRGPAPLSLAL HA V E+ K+ F WTETDFRT EAPWWA Sbjct: 10 VPDLGRRQFLNLLWVGTAAGTALGGLYPVIKYFIPPSSGGAGGGVIAKDALGNDIIVSDYLQTHTAGDRSLAQGLKGDPTYVVVEGDNTISSYGINAICTHLGCVVPWNTAENKFMCPCHGSQYDETGKVVRGPAPLSLALVHAEVTEDDKISFTDWTETDFRTDEAPWWA 180
BLAST of EY649936 vs. ExPASy Swiss-Prot
Match: UCRIB_CYAPA (Cytochrome b6-f complex iron-sulfur subunit 2, cyanelle OS=Cyanophora paradoxa GN=petC-2 PE=2 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 4.352e-62 Identity = 118/183 (64.48%), Postives = 134/183 (73.22%), Query Frame = 3 Query: 141 IKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGL*S-AGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQ*RVVRGPAPLSLALAHANV-ENGKVVFVPWTETDFRTGEAPWW 683 I C A S D VPDMGKR+LMNLLLLGA++ PT P+ +F PP AG G AKDA GNDI WL T PGDR+L +GLKGD TYL+V++D TL YG+NAVCTHLGCVVPWN +E KF+CPCHGSQY+ +VVRGPAPLSLALAH NV E+G V F PWTETDFRT APWW Sbjct: 61 ISCSAAS---DEVPDMGKRKLMNLLLLGAIAGPTIGAGGPFVSFLVPPKSGGGAGAGQAAKDAAGNDIKVEKWLETXKPGDRSLAQGLKGDATYLIVKEDGTLEKYGLNAVCTHLGCVVPWNQSEGKFMCPCHGSQYDRTGKVVRGPAPLSLALAHVNVLEDGVVAFEPWTETDFRTNTAPWW 240
BLAST of EY649936 vs. ExPASy Swiss-Prot
Match: UCRI_CYAP4 (Cytochrome b6-f complex iron-sulfur subunit OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=petC PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 5.684e-62 Identity = 108/169 (63.91%), Postives = 126/169 (74.56%), Query Frame = 3 Query: 177 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGL*SAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQ*RVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWW 683 VPDMG+RQ MNLL G+ + ML P +F PP GGG AKDA+GNDI +D+L H DR L +GLKGDPTY+VV+ D T+ YG+NAVCTHLGCVVPWN +ENKFICPCHGSQY+N +VVRGPAPLSLALAHA V + K+ F PWTETDFRTG+ PWW Sbjct: 10 VPDMGRRQFMNLLTFGSATGVALGMLYPVVRYFIPPASGGVGGGVVAKDALGNDISVSDFLAKHPANDRALAQGLKGDPTYIVVQDDHTIGDYGLNAVCTHLGCVVPWNISENKFICPCHGSQYDNTGKVVRGPAPLSLALAHAAVSDDKITFTPWTETDFRTGKEPWW 178
BLAST of EY649936 vs. ExPASy Swiss-Prot
Match: UCRI_SYNPW (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain WH7803) GN=petC PE=3 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 9.696e-62 Identity = 109/177 (61.58%), Postives = 131/177 (74.01%), Query Frame = 3 Query: 156 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGL*SAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQ*RVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWWA 686 T +PA VP MG+RQ MNLL G+V+ L P +F PP +GGGT+AKD +GN + A+ WL+TH GDR+L +GLKGDPTYL+VE D + SYGINA+CTHLGCVVPWNS NKF+CPCHGSQY+ +VVRGPAPLSLALA+ +VEN V WT+TDFRTGE PWWA Sbjct: 2 TQMPAGDVPGMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPRAAGSGGGTSAKDELGNAVTASGWLSTHPAGDRSLVQGLKGDPTYLIVEGDDAIGSYGINAICTHLGCVVPWNSGANKFMCPCHGSQYDATGKVVRGPAPLSLALANVSVENDNVFVSQWTDTDFRTGEKPWWA 178
BLAST of EY649936 vs. ExPASy Swiss-Prot
Match: UCRIA_ANASP (Cytochrome b6-f complex iron-sulfur subunit 1 OS=Anabaena sp. (strain PCC 7120) GN=petC1 PE=1 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 1.266e-61 Identity = 108/170 (63.53%), Postives = 126/170 (74.12%), Query Frame = 3 Query: 177 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGL*SAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQ*RVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWWA 686 VPDMG+RQ MNLL G V+ L P +F PP AGGGTTAKD +GND+ + +L +H GDRTL +GLKGDPTY+VVE + + YGINAVCTHLGCVVPWN+AENKF CPCHGSQY+ +VVRGPAP SLAL+HA EN K+V WTETDFRTGE PWW+ Sbjct: 10 VPDMGRRQFMNLLTFGTVTGVALGALYPVVNYFIPPAAGGAGGGTTAKDELGNDVSVSKFLESHNVGDRTLVQGLKGDPTYIVVESKEAITDYGINAVCTHLGCVVPWNAAENKFKCPCHGSQYDATGKVVRGPAPKSLALSHAKTENDKIVLTSWTETDFRTGEEPWWS 179 The following BLAST results are available for this feature:
BLAST of EY649936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >EY649936 ID=EY649936; Name=EY649936; organism=Citrus sinensis; type=EST; length=929bpback to top |