EY649936
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649936 vs. ExPASy Swiss-Prot
Match: UCRIC_ANASP (Cytochrome b6-f complex iron-sulfur subunit 3 OS=Anabaena sp. (strain PCC 7120) GN=petC3 PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 6.997e-36 Identity = 79/176 (44.89%), Postives = 101/176 (57.39%), Query Frame = 3 Query: 159 SIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFF-APPGL*SAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQ*RVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWW 683 SIP + P + +RQL+N + V++ G L P F AP AGG AKD +G I A+ L P R L GL G+PTYL+V++D TL G+ CTHLGC PWN + +F CPCHGS+Y VVRGPAPL L + V + ++ PWTETD RTG+ PWW Sbjct: 4 SIPIES-PSLSRRQLLNFITGATVAVTAGAALYPAGKFLIAPAEKTGAGGAILAKDILGKQIPASQIL-AEPPQTRALVAGLAGEPTYLIVKEDHTLDRIGLVDNCTHLGCTFPWNPLDQQFQCPCHGSRYAPDGSVVRGPAPLPLKIVQVAVIDNSILISPWTETDPRTGKKPWW 177
BLAST of EY649936 vs. ExPASy Swiss-Prot
Match: UCRIB_ANAVT (Cytochrome b6-f complex iron-sulfur subunit 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=petC2 PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 5.014e-34 Identity = 77/169 (45.56%), Postives = 93/169 (55.03%), Query Frame = 3 Query: 180 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGL*S-AGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQ*RVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWW 683 P M +RQL+N V+ + P FF PP + A GG AKD IG+ I A+ L G R L GL G+PTYL V +D TL GI CTHLGC PWN + +F CPCHGS+Y+ Q V RGPA L L H V++ + W ETD RTGE PWW Sbjct: 10 PSMSRRQLLNFFTGAIVAATASAAIYPATKFFMPPAESTDAEGGVLAKDKIGHPIPASQIL-VQASGTRALIAGLAGEPTYLTVREDGTLDPMGIVNNCTHLGCTFPWNPVDQQFQCPCHGSRYDAQGSVERGPANRPLKLVHVQVKDDYIWISSWQETDPRTGEKPWW 177
BLAST of EY649936 vs. ExPASy Swiss-Prot
Match: UCRIB_ANASP (Cytochrome b6-f complex iron-sulfur subunit 2 OS=Anabaena sp. (strain PCC 7120) GN=petC2 PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.905e-33 Identity = 76/169 (44.97%), Postives = 93/169 (55.03%), Query Frame = 3 Query: 180 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGL*S-AGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQ*RVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWW 683 P M +RQL+N V+ + P FF PP + A GG A+D IG+ I A+ L G R L GL G+PTYL V +D TL GI CTHLGC PWN + +F CPCHGS+Y+ Q V RGPA L L V++ + PW ETD RTGE PWW Sbjct: 10 PSMSRRQLLNFFTGAIVATTASAAIYPATKFFMPPAESTDAEGGILAQDKIGHPIPASQIL-AQASGTRALIAGLAGEPTYLTVREDGTLDPMGIVNNCTHLGCTFPWNPVDQQFQCPCHGSRYDAQGSVERGPANRPLKLVQVQVKDDYIWISPWQETDPRTGEKPWW 177
BLAST of EY649936 vs. ExPASy Swiss-Prot
Match: UCRI_CHLTE (Cytochrome b6-f complex iron-sulfur subunit OS=Chlorobium tepidum GN=petC PE=3 SV=4) HSP 1 Score: 69.707 bits (169), Expect = 2.677e-11 Identity = 29/75 (38.67%), Postives = 46/75 (61.33%), Query Frame = 3 Query: 408 DPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQ*RVVRGPAPLSLALAHANVENGKVV 632 D +VV +L + ++A+CTHLGC+V W+ A + CPCHG++Y +++ GP PL L +E+GK+V Sbjct: 105 DDKVIVVNHGGSLTA--VSAICTHLGCLVHWDEAADMIACPCHGAKYTQDGKIISGPQPLPLKQYKVKIEDGKIV 177
BLAST of EY649936 vs. ExPASy Swiss-Prot
Match: UCRI_CHLLT (Cytochrome b6-f complex iron-sulfur subunit OS=Chlorobium limicola f.sp. thiosulfatophilum GN=petC PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 5.965e-11 Identity = 29/71 (40.85%), Postives = 44/71 (61.97%), Query Frame = 3 Query: 420 LVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQ*RVVRGPAPLSLALAHANVENGKVV 632 +VV K L + ++AVCTHLGC+V W A+N++ CPCHG++Y ++ GP PL L A +E ++ Sbjct: 109 IVVNKGGALTA--VSAVCTHLGCLVNWVDADNQYFCPCHGAKYKLTGEIISGPQPLPLKQYKARIEGDSII 177 The following BLAST results are available for this feature:
BLAST of EY649936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >EY649936 ID=EY649936; Name=EY649936; organism=Citrus sinensis; type=EST; length=929bpback to top |