EY649932

Overview
NameEY649932
Unique NameEY649932
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649932 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 1.914e-78
Identity = 152/226 (67.26%), Postives = 166/226 (73.45%), Query Frame = 3
Query:   84 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHXXXXXXXXXXXXNISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFRTTGSXWVGPLIGGGLAG 761
            I  G   DSFS+ S KAYL+EFI+TLLFVFAGVGSA+AF K+T+D ALDP+GLVAIAI H            NISGGH+NPAVT GLA+GG IT++TG FYWIAQ LGSIVA  LL  VT G +VPTH                  TF LVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAV SG+       WVGPL+GG LAG
Sbjct:    4 IEVGSVGDSFSVSSLKAYLSEFIATLLFVFAGVGSAVAFAKLTSDGALDPAGLVAIAIAHAFALFVGVSIAANISGGHLNPAVTLGLAIGGNITLITGFFYWIAQCLGSIVACLLLVFVTNGKSVPTHGVSAGLGAVEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDLSQIWIYWVGPLVGGALAG 229          
BLAST of EY649932 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 1.164e-67
Identity = 136/226 (60.18%), Postives = 152/226 (67.26%), Query Frame = 3
Query:   84 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHXXXXXXXXXXXXNISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFRTTGSXWVGPLIGGGLAG 761
            IA GR D++    + KA LAEFISTL+FV AG GS +AFNK+T + A  PSGLVA A+ H            NISGGHVNPAVTFG  +GG IT+L GI YWIAQLLGS+VA  +LK  TGGLAVP                    TFGLVYTVYATA DPK GSLGTIAPIAIGFIVGANILA G FSG SMNPA +FGPAV S  +      W GPL+GGG+AG
Sbjct:    6 IAIGRPDEATRPDALKAALAEFISTLIFVVAGSGSGMAFNKLTENGATTPSGLVAAAVAHAFGLFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLILKFATGGLAVPAFGLSAGVGVLNAFVFEIVMTFGLVYTVYATAIDPKNGSLGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVVSWTWTNHWVYWAGPLVGGGIAG 231          
BLAST of EY649932 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2)

HSP 1 Score: 251.906 bits (642), Expect = 3.745e-66
Identity = 136/230 (59.13%), Postives = 150/230 (65.22%), Query Frame = 3
Query:   75 TMAIAFGRFDDS-FSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHXXXXXXXXXXXXNISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFRTTGSXWVGPLIGGGLAG 761
            T  IA G   +  +   + +A LAEFISTL+FVFAG GS IAFNK+T + A  PSGLVA A+ H            NISGGHVNPAVTFG+ LGG IT+L GI YWIAQLLGS+ A FLL   TGG  +P                    TFGLVYTVYATA DPK GSLGTIAPIAIGFIVGANILA G FSG SMNPA +FGPAV S  +      W GPLIGGGLAG
Sbjct:    3 TRNIAIGGVQEEVYHPNALRAALAEFISTLIFVFAGSGSGIAFNKITDNGATTPSGLVAAALAHAFGLFVAVSVGANISGGHVNPAVTFGVLLGGNITLLRGILYWIAQLLGSVAACFLLSFATGGEPIPAFGLSAGVGSLNALVFEIVMTFGLVYTVYATAVDPKNGSLGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVVSWTWTNHWVYWAGPLIGGGLAG 232          
BLAST of EY649932 vs. ExPASy Swiss-Prot
Match: TIP11_ORYSJ (Probable aquaporin TIP1-1 OS=Oryza sativa subsp. japonica GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 4.140e-65
Identity = 133/226 (58.85%), Postives = 151/226 (66.81%), Query Frame = 3
Query:   84 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHXXXXXXXXXXXXNISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFRTTGSXWVGPLIGGGLAG 761
            IA G   + +  G+ KA LAEFISTL+FVFAG GS +AF+K+T   A  P+GL+A A+ H            NISGGHVNPAVTFG  +GG IT+  G+ YWIAQLLGS VA FLL+  TGGLA  T                   TFGLVYTVYATA DPKKGSLGTIAPIAIGFIVGANIL  G F G SMNPA SFGPA+ S ++ +    WVGPLIGGGLAG
Sbjct:    6 IAVGSHQEVYHPGALKAALAEFISTLIFVFAGQGSGMAFSKLTGGGATTPAGLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWIAQLLGSTVACFLLRFSTGGLATGTFG-LTGVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALVSWSWESQWVYWVGPLIGGGLAG 230          
BLAST of EY649932 vs. ExPASy Swiss-Prot
Match: TIP11_MAIZE (Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 1.127e-62
Identity = 129/226 (57.08%), Postives = 146/226 (64.60%), Query Frame = 3
Query:   84 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHXXXXXXXXXXXXNISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFRTTGSXWVGPLIGGGLAG 761
            IA G   + +  G+ KA  AEFISTL+FVFAG GS +AF+K+T      P+GL+A A+ H            NISGGHVNPAVTFG  +GG IT+  G+ YW+AQLLGS VA FLL+  TGG A  T                   TFGLVYTVYATA DPKKGSLGTIAPIAIGFIVGANIL  G F G SMNPA SFGPA+ S  +      WVGPLIGGGLAG
Sbjct:    6 IALGSHQEVYHPGALKAAFAEFISTLIFVFAGQGSGMAFSKLTGGGPTTPAGLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWVAQLLGSTVACFLLRFSTGGQATGTFG-LTGVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALVSWEWGYQWVYWVGPLIGGGLAG 230          
BLAST of EY649932 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 6.840e-60
Identity = 128/226 (56.64%), Postives = 147/226 (65.04%), Query Frame = 3
Query:   84 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHXXXXXXXXXXXXNISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFRTTGSXWVGPLIGGGLAG 761
            IA G   ++    + KA LAEFIST +FVFAG GS IA+NK+T D A  P+GL++ +I H            NISGGHVNPAVTFG  +GG IT+L GI Y IAQLLGSIVAS LL  VT   +VP                    TFGLVYTVYATA DPKKG++G IAPIAIGFIVGANIL  G F+G SMNPA SFGPAV S ++      W GPLIGGG+AG
Sbjct:    6 IAVGTPQEATHPDTLKAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIVYIIAQLLGSIVASALLVFVTAS-SVPAFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKGNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVVSWSWSNHWVYWAGPLIGGGIAG 230          
BLAST of EY649932 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 4.434e-59
Identity = 118/210 (56.19%), Postives = 139/210 (66.19%), Query Frame = 3
Query:  129 KAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHXXXXXXXXXXXXNISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFRTTGSXWVGPLIGGGLA 758
            KA +AEFISTL+FVFAG GS +AF+K+T   A  P+GL+A ++ H            NISGGHVNPAVTFG  +GG I++L  + YW+AQLLGS+VA  LLK+ TGG A+   +                 TFGLVYTVYATA DPKKG LG IAPIAIGFIVGANILA G F G SMNPA SFGPAV +G +      WVGPL G  +A
Sbjct:   21 KAAVAEFISTLIFVFAGSGSGMAFSKLTDGGAATPAGLIAASLAHALALFVAVSVGANISGGHVNPAVTFGAFVGGNISLLKALVYWVAQLLGSVVACLLLKIATGGAALGAFSLSAGVGAMNAVVLEMVMTFGLVYTVYATAVDPKKGDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTGVWENHWVYWVGPLAGAAIA 230          
BLAST of EY649932 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 8.361e-58
Identity = 115/210 (54.76%), Postives = 137/210 (65.24%), Query Frame = 3
Query:  129 KAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHXXXXXXXXXXXXNISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFRTTGSXWVGPLIGGGLA 758
            KA +AEFIS L+FVFAG GS +AF+K+T      PSGL+A ++ H            NISGGHVNPAVTFG  +GG I+++  + YW+AQLLGS+VA  LLK+ TGG AV   +                 TFGLVYTVYATA DPKKG LG IAPIAIGFIVGANILA G F G SMNPA SFGPAV +G +      W+GP +G  +A
Sbjct:   21 KAAVAEFISMLIFVFAGSGSGMAFSKLTDGGGTTPSGLIAASLAHALALFVAVAVGANISGGHVNPAVTFGAFVGGNISLVKAVVYWVAQLLGSVVACLLLKIATGGAAVGAFSLSAGVGAWNAVVFEIVMTFGLVYTVYATAVDPKKGDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTGVWDNHWVYWLGPFVGAAIA 230          
BLAST of EY649932 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2)

HSP 1 Score: 223.016 bits (567), Expect = 1.863e-57
Identity = 126/226 (55.75%), Postives = 145/226 (64.16%), Query Frame = 3
Query:   84 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHXXXXXXXXXXXXNISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFRTTGSXWVGPLIGGGLAG 761
            IA G   ++    + KA LAEFIST +FVFAG GS IA+NK+T D A  P+GL++ +I H            NISGGHVNPAV FG  +GG IT+L GI Y IAQLLGSIV S LL  VT   +VP                    TFGLVYTVYATA DPKKG++G IAPIAIGFIVGANIL  G F+G SMNPA SFGPAV S ++      W GPLIGGG+AG
Sbjct:    6 IAVGTPQEATHPDTLKAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAV-FGAFVGGNITLLRGIVYIIAQLLGSIVCSALLVFVTAS-SVPAFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKGNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVVSWSWSNHWVYWAGPLIGGGIAG 229          
BLAST of EY649932 vs. ExPASy Swiss-Prot
Match: TIP13_ARATH (Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.335e-55
Identity = 114/225 (50.67%), Postives = 137/225 (60.89%), Query Frame = 3
Query:   84 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHXXXXXXXXXXXXNISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFRTTGSXWVGPLIGGGLA 758
            IA G   ++    + +A  AEF S ++FVFAG GS +A+ K+T D    P+GLVA ++ H            N+SGGHVNPAVTFG  +GG IT+L  I YWIAQLLG++VA  LLKV TGG+     +                 TFGLVYTVYATA DPKKG +G IAP+AIG IVGANIL  G F G SMNPA SFGPAV S  +      WVGP IG  +A
Sbjct:    6 IAIGTPGEASRPDAIRAAFAEFFSMVIFVFAGQGSGMAYGKLTGDGPATPAGLVAASLSHAFALFVAVSVGANVSGGHVNPAVTFGAFIGGNITLLRAILYWIAQLLGAVVACLLLKVSTGGMETAAFSLSYGVTPWNAVVFEIVMTFGLVYTVYATAVDPKKGDIGIIAPLAIGLIVGANILVGGAFDGASMNPAVSFGPAVVSWIWTNHWVYWVGPFIGAAIA 230          
The following BLAST results are available for this feature:
BLAST of EY649932 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 177
Match NameE-valueIdentityDescription
TIP23_ARATH1.914e-7867.26Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3... [more]
TIP11_ARATH1.164e-6760.18Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1... [more]
TIP12_ARATH3.745e-6659.13Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2... [more]
TIP11_ORYSJ4.140e-6558.85Probable aquaporin TIP1-1 OS=Oryza sativa subsp. j... [more]
TIP11_MAIZE1.127e-6257.08Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1[more]
TIP1_MEDTR6.840e-6056.64Probable aquaporin TIP-type OS=Medicago truncatula... [more]
TIP12_MAIZE4.434e-5956.19Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1[more]
TIP12_ORYSJ8.361e-5854.76Probable aquaporin TIP1-2 OS=Oryza sativa subsp. j... [more]
TIP1_MEDSA1.863e-5755.75Probable aquaporin TIP-type OS=Medicago sativa GN=... [more]
TIP13_ARATH1.335e-5550.67Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-100-005-B11-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649932 ID=EY649932; Name=EY649932; organism=Citrus sinensis; type=EST; length=920bp
ACCTTATCTTCTTCTTCTTAAGAAAGACTCGAGAGAGTTTTTTTTTTTCC
TATTCTCTAGCTCTTTCTTGATCAACAATGGCTATTGCCTTCGGCCGCTT
CGATGATTCTTTCAGCTTAGGCTCCTTCAAGGCCTATCTTGCTGAGTTTA
TCTCAACTTTGCTCTTTGTTTTCGCCGGCGTTGGCTCGGCCATTGCTTTC
AACAAGGTGACAGCAGATGCAGCACTTGATCCATCAGGGCTAGTAGCCAT
AGCTATTTGCCATGGATTTGCTCTATTTGTCGCTGTTGCAGTTGGTGCTA
ACATCTCAGGTGGCCACGTCAACCCAGCCGTCACCTTTGGATTGGCTCTT
GGTGGCCAAATCACCATCCTCACTGGCATCTTCTACTGGATTGCCCAACT
TCTTGGCTCTATTGTTGCCAGCTTCCTCCTCAAAGTTGTCACTGGAGGAT
TGGCAGTTCCTACCCACAATGTTGCTGCTGGAGTTGGAGCCATTGAAGGA
GTTGTGATGGAGATCATCATCACATTTGGTTTGGTCTACACGGTCTATGC
CACGGCAGCTGACCCGAAGAAGGGATCATTGGGCACCATTGCACCCATTG
CCATTGGTTTCATTGTCGGTGCCAACATCCTGGCCGCCGGCCCATTCTCC
GGTGGATCCATGAACCCGGCCCGTTCCTTCGGGCCTGCCGTTGCCAGCGG
CAACTTCCGGACAACTGGATCTANCTGGGTTGGCCCTCTCATTGGCGGCG
GGCTTGCGGGGGCTCATCTATGGCATGTGTCATGCACTCTGACATGCCCC
CTATCTATGACTATTNATTATAGTTAAACTTGTTTAAAAGTTNNAGTAAT
CATTTGACACCCTGCTCTGCTCTTTCTTTTTTGTATAAGAAGGAAAGCAG
CTTGCTCTTNCTCTTTCTTC
back to top