EY649930
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649930 vs. ExPASy Swiss-Prot
Match: COXZ_RICFE (Cytochrome c oxidase assembly protein ctaG OS=Rickettsia felis GN=ctaG PE=3 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 7.095e-14 Identity = 33/88 (37.50%), Postives = 57/88 (64.77%), Query Frame = 2 Query: 434 QKSRKMLLY-LTALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGTVTTREVVVQFNADVADGIQWKFIPTKER 694 +KS K L + L L+ +MV ++A+VP+Y FC+ TGYGGT T +E ++ +SK T+ ++++F+A+V + W+FIP ++R Sbjct: 3 KKSNKNLAFSLLGLIISMVLLSFASVPIYNLFCKVTGYGGT-----TAKETVSVYSK--VKGTKPIIIEFDANVDKDLPWRFIPRQQR 83 HSP 2 Score: 34.2686 bits (77), Expect = 7.095e-14 Identity = 20/47 (42.55%), Postives = 25/47 (53.19%), Query Frame = 3 Query: 753 DSITGVSTYNVTPMKAAVYFNKYNAFALRSSVFSPRADD---MPVFF 884 + I G S YNVTP KA YF K + F + +AD+ MPV F Sbjct: 104 NDIIGTSVYNVTPNKAGKYFVKIHCFCFEEQLL--KADEKVLMPVTF 148
BLAST of EY649930 vs. ExPASy Swiss-Prot
Match: COXZ_RHIEC (Cytochrome c oxidase assembly protein ctaG OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=ctaG PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 1.193e-13 Identity = 34/80 (42.50%), Postives = 46/80 (57.50%), Query Frame = 2 Query: 449 MLLYLTALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGTVTTREVVVQFNADVADGIQWKFIPTK 688 +++ + VF M +YAAVPLYR FCQ TGY GT QR E + V R++ V F+A+VA G+QW F P + Sbjct: 18 VVMMCLSFVFGMGAMSYAAVPLYRIFCQVTGYNGTTQRVEQM---------SSVVLDRKMRVTFDANVAPGLQWNFKPVE 88 HSP 2 Score: 32.3426 bits (72), Expect = 1.193e-13 Identity = 16/41 (39.02%), Postives = 21/41 (51.22%), Query Frame = 3 Query: 765 GVSTYNVTPMKAAVYFNKYNAFALRSSVFSPRAD-DMPVFF 884 G + +NVTP +A YFNK F + P +MPV F Sbjct: 115 GQAVFNVTPGEAGAYFNKVQCFCFTETDLKPGEKLEMPVVF 155
BLAST of EY649930 vs. ExPASy Swiss-Prot
Match: COXZ_BRASO (Cytochrome c oxidase assembly protein ctaG OS=Bradyrhizobium sp. (strain ORS278) GN=ctaG PE=3 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 2.006e-13 Identity = 31/74 (41.89%), Postives = 44/74 (59.46%), Query Frame = 2 Query: 467 ALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGTVTTREVVVQFNADVADGIQWKFIPTK 688 A+V M+G++YAAVP Y FC+ATG+ GT Q +A + R + V+F+A+VA G+ WKF P K Sbjct: 40 AVVVLMIGASYAAVPFYNWFCRATGFNGTTQ--------VATAAPSAAPLARRIGVRFDANVAGGLPWKFEPEK 105 HSP 2 Score: 34.2686 bits (77), Expect = 2.006e-13 Identity = 15/39 (38.46%), Postives = 20/39 (51.28%), Query Frame = 3 Query: 771 STYNVTPMKAAVYFNKYNAFALRSSVFSP-RADDMPVFF 884 + YNVTP+ + YF K N F +P +MPV F Sbjct: 134 AAYNVTPLTSGAYFQKINCFCFTEQTMAPGETREMPVVF 172
BLAST of EY649930 vs. ExPASy Swiss-Prot
Match: COXZ_RICPR (Cytochrome c oxidase assembly protein ctaG OS=Rickettsia prowazekii GN=ctaG PE=3 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 2.027e-13 Identity = 33/88 (37.50%), Postives = 57/88 (64.77%), Query Frame = 2 Query: 434 QKSRKMLLY-LTALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGTVTTREVVVQFNADVADGIQWKFIPTKER 694 +KS K L + L L+ +MV ++A+VP+Y FC+ TGYGGT T++E ++ +SK T+ ++++F+A+V + W FIP ++R Sbjct: 3 KKSNKNLAFSLLGLMMSMVLLSFASVPIYNLFCKVTGYGGT-----TIKETVSVYSK--VKGTKAIIIEFDANVDPNLPWHFIPRQKR 83 HSP 2 Score: 33.4982 bits (75), Expect = 2.027e-13 Identity = 19/43 (44.19%), Postives = 21/43 (48.84%), Query Frame = 3 Query: 759 ITGVSTYNVTPMKAAVYFNKYNAFALRSSVFSPRADD-MPVFF 884 I G S YNVTP KA YF K + F + R MPV F Sbjct: 106 IIGTSIYNVTPNKAGKYFVKIHCFCFEEQLLKAREKVLMPVTF 148
BLAST of EY649930 vs. ExPASy Swiss-Prot
Match: COXZ_RICCN (Cytochrome c oxidase assembly protein ctaG OS=Rickettsia conorii GN=ctaG PE=3 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 4.431e-13 Identity = 33/88 (37.50%), Postives = 57/88 (64.77%), Query Frame = 2 Query: 434 QKSRKMLLY-LTALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGTVTTREVVVQFNADVADGIQWKFIPTKER 694 +KS K L + L L+ +MV ++A+VP+Y FC+ TGYGGT T +E ++ +SK T+ ++++F+A+V + W+FIP ++R Sbjct: 3 KKSNKNLAFSLLGLIISMVLLSFASVPIYNLFCKVTGYGGT-----TAKETVSVYSK--VKGTKPIIIEFDANVDKDLPWRFIPRQQR 83 HSP 2 Score: 31.5722 bits (70), Expect = 4.431e-13 Identity = 14/32 (43.75%), Postives = 17/32 (53.12%), Query Frame = 3 Query: 753 DSITGVSTYNVTPMKAAVYFNKYNAFALRSSV 848 + I G S YNVTP KA YF K + F + Sbjct: 104 NDIIGTSVYNVTPNKAGKYFVKIHCFCFEEQL 135
BLAST of EY649930 vs. ExPASy Swiss-Prot
Match: COXZ_BRASB (Cytochrome c oxidase assembly protein ctaG OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=ctaG PE=3 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 1.626e-12 Identity = 28/69 (40.58%), Postives = 40/69 (57.97%), Query Frame = 2 Query: 470 LVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGTVTTREVVVQFNADVADGIQWKF 676 +V MVG++YAAVP Y FC+ATG+ GT Q +A + R + V+F+ +VA G+ WKF Sbjct: 39 VVVLMVGASYAAVPFYNWFCRATGFNGTTQ--------VATSAPTSAPLARRIAVRFDTNVAGGLPWKF 99 HSP 2 Score: 35.8094 bits (81), Expect = 1.626e-12 Identity = 16/39 (41.03%), Postives = 21/39 (53.85%), Query Frame = 3 Query: 771 STYNVTPMKAAVYFNKYNAFALRSSVFSP-RADDMPVFF 884 + YNVTP+ + VYF K N F +P +MPV F Sbjct: 132 AAYNVTPLTSGVYFQKINCFCFTEQTMAPGETREMPVVF 170
BLAST of EY649930 vs. ExPASy Swiss-Prot
Match: COXZ_NITHX (Cytochrome c oxidase assembly protein ctaG OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=ctaG1 PE=3 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 3.562e-12 Identity = 29/71 (40.85%), Postives = 42/71 (59.15%), Query Frame = 2 Query: 470 LVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGTVTTREVVVQFNADVADGIQWKFIP 682 LV MVG+ YAAVP Y FC+ATG+ GT Q +A+ + R V V+F+++++ G+ WKF P Sbjct: 38 LVALMVGAAYAAVPFYNWFCRATGFNGTTQ--------VAKVAPSAAPLARTVAVRFDSNISGGLPWKFEP 100 HSP 2 Score: 33.113 bits (74), Expect = 3.562e-12 Identity = 13/32 (40.62%), Postives = 16/32 (50.00%), Query Frame = 3 Query: 762 TGVSTYNVTPMKAAVYFNKYNAFALRSSVFSP 857 TG + YNVTP+ YF K N F +P Sbjct: 128 TGQAAYNVTPLTVGSYFTKINCFCFTEQTLAP 159
BLAST of EY649930 vs. ExPASy Swiss-Prot
Match: COXZ_BRAJA (Cytochrome c oxidase assembly protein ctaG OS=Bradyrhizobium japonicum GN=ctaG PE=3 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 2.219e-11 Identity = 29/71 (40.85%), Postives = 43/71 (60.56%), Query Frame = 2 Query: 470 LVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGTVTTREVVVQFNADVADGIQWKFIP 682 +V MVG++YAAVP Y FC+ATG+ GT Q +A + R++ V+F+++VA G+ WKF P Sbjct: 36 VVALMVGASYAAVPFYNWFCRATGFNGTTQ--------VATAAPATGPIARKIAVRFDSNVAPGLPWKFEP 98 HSP 2 Score: 32.3426 bits (72), Expect = 2.219e-11 Identity = 15/41 (36.59%), Postives = 19/41 (46.34%), Query Frame = 3 Query: 765 GVSTYNVTPMKAAVYFNKYNAFALRSSVFSP-RADDMPVFF 884 G + YNV P+ YF K N F +P +MPV F Sbjct: 127 GQAAYNVAPLTVGSYFQKINCFCFTEQTMAPGEKREMPVVF 167
BLAST of EY649930 vs. ExPASy Swiss-Prot
Match: COXZ_RHOPB (Cytochrome c oxidase assembly protein ctaG OS=Rhodopseudomonas palustris (strain BisB18) GN=ctaG PE=3 SV=1) HSP 1 Score: 53.9138 bits (128), Expect = 6.317e-11 Identity = 28/71 (39.44%), Postives = 43/71 (60.56%), Query Frame = 2 Query: 470 LVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGTVTTREVVVQFNADVADGIQWKFIP 682 +V MVG++YAAVP Y FC+ATG+ GT Q +A + R++ V+F+++V +G+ WKF P Sbjct: 29 VVALMVGASYAAVPFYNWFCRATGFNGTTQ--------VATAAPIAAPLPRKITVRFDSNV-NGLPWKFTP 90 HSP 2 Score: 34.6538 bits (78), Expect = 6.317e-11 Identity = 16/42 (38.10%), Postives = 20/42 (47.62%), Query Frame = 3 Query: 762 TGVSTYNVTPMKAAVYFNKYNAFALRSSVFSP-RADDMPVFF 884 TG + YNV P+ YF K N F F+ +MPV F Sbjct: 118 TGQAAYNVAPLTVGAYFQKINCFCFTEQTFAAGETREMPVVF 159 The following BLAST results are available for this feature:
BLAST of EY649930 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY649930 ID=EY649930; Name=EY649930; organism=Citrus sinensis; type=EST; length=910bpback to top |