EY649928
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.466e-30 Identity = 47/130 (36.15%), Postives = 68/130 (52.31%), Query Frame = 2 Query: 275 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNTS 616 P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ AG L+Y + + ++ +++ +G EG R A P TDP++P S Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAG--GPLGEVTDPLYPGGS 195 HSP 2 Score: 72.4034 bits (176), Expect = 2.466e-30 Identity = 39/68 (57.35%), Postives = 46/68 (67.65%), Query Frame = 1 Query: 625 TDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPV 828 TD YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GP+ +L+ HLADPV Sbjct: 187 TDPLYPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLDNLVDHLADPV 252
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 4.181e-30 Identity = 50/141 (35.46%), Postives = 73/141 (51.77%), Query Frame = 2 Query: 239 PNRPLWF-PGSTP-PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFP 607 P+RP + P S P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PE+L+K G+ W+ AG L+Y + ++ +++ +G+ EG R P DPI+P Sbjct: 52 PDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGG--GPLGEGLDPIYP 190 HSP 2 Score: 71.2478 bits (173), Expect = 4.181e-30 Identity = 39/69 (56.52%), Postives = 45/69 (65.22%), Query Frame = 1 Query: 622 GTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPV 828 G D YPGG FDPLG P+ EL+ KEIKNGRLAM ++ G + Q I TG GPI +L HLADPV Sbjct: 184 GLDPIYPGGA-FDPLGLAD-DPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPV 250
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.184e-30 Identity = 55/157 (35.03%), Postives = 81/157 (51.59%), Query Frame = 2 Query: 203 TRSVSVSAAAADPNRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNTS 616 ++SVS + P+R + F G PP +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL++ G+ W+ AG L+Y + + ++ +++ +G EG R A P TDPI+P S Sbjct: 30 SKSVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG--GPLGEVTDPIYPGGS 183 HSP 2 Score: 70.0922 bits (170), Expect = 4.184e-30 Identity = 38/68 (55.88%), Postives = 45/68 (66.18%), Query Frame = 1 Query: 625 TDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPV 828 TD YPGG FDPLG PE EL+ KE+KNGRLAM ++ G + Q I TG GP+ +L HLADPV Sbjct: 175 TDPIYPGGS-FDPLGLAD-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 240
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.083e-30 Identity = 56/157 (35.67%), Postives = 79/157 (50.32%), Query Frame = 2 Query: 200 GTRSVSVSAAAA--DPNRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAG---------------ELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFP 607 G +SV+ S + P+R L+ F G PP +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL + G+ W+ AG +L + ++ ++I +G EG R A P TDPI+P Sbjct: 50 GKKSVAASIDSPWYGPDRVLYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAG--GPLGEVTDPIYP 203 HSP 2 Score: 70.0922 bits (170), Expect = 7.083e-30 Identity = 39/68 (57.35%), Postives = 45/68 (66.18%), Query Frame = 1 Query: 625 TDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPV 828 TD YPGG FDPLG P+ EL+ KEIKNGRLAM ++ G + Q I TG GPI +L HLADPV Sbjct: 198 TDPIYPGGN-FDPLGLAD-DPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 263
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 9.231e-30 Identity = 46/128 (35.94%), Postives = 66/128 (51.56%), Query Frame = 2 Query: 272 PPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWA---------DIIKPG 580 PP +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ AG L+Y + + ++ ++I +G EG R A D++ PG Sbjct: 65 PPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGEGPLGEAEDLLYPG 192 HSP 2 Score: 70.4774 bits (171), Expect = 9.231e-30 Identity = 38/67 (56.72%), Postives = 46/67 (68.66%), Query Frame = 1 Query: 628 DVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPV 828 D+ YPGG FDPLG + PE EL+ KEIKNGRLAM ++ G + Q I TG GP+ +L HLADPV Sbjct: 187 DLLYPGGS-FDPLGLAT-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 251
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.204e-29 Identity = 50/131 (38.17%), Postives = 69/131 (52.67%), Query Frame = 2 Query: 272 PPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNTS 616 PP +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL + G+ SW+ AG L+Y + + ++ ++I +G EG R A P TDPI+P S Sbjct: 45 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEASWFKAGSQIFSEGGLDYLGNQSLIHAQSILAIWATQVILMGAVEGYRIAG--GPLGEVTDPIYPGGS 173 HSP 2 Score: 67.0106 bits (162), Expect = 1.204e-29 Identity = 37/68 (54.41%), Postives = 44/68 (64.71%), Query Frame = 1 Query: 625 TDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPV 828 TD YPGG FDPL PE EL+ KEIKNGRLAM ++ G + Q I TG GP+ +L HLA+PV Sbjct: 165 TDPIYPGGS-FDPLALAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAEPV 230
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.565e-29 Identity = 53/156 (33.97%), Postives = 79/156 (50.64%), Query Frame = 2 Query: 206 RSVSVSAAAADPNRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNTS 616 + VS S+ PNR + F G +P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ G L+Y + + ++ +++ +G EG R A +P DP++P S Sbjct: 43 KPVSSSSPWYGPNRVKYLGPFSGESP-SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG--EPLGEVVDPLYPGGS 195 HSP 2 Score: 68.9366 bits (167), Expect = 1.565e-29 Identity = 37/64 (57.81%), Postives = 43/64 (67.19%), Query Frame = 1 Query: 637 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPV 828 YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GP+ +L HLADPV Sbjct: 191 YPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 252
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.565e-29 Identity = 55/144 (38.19%), Postives = 75/144 (52.08%), Query Frame = 2 Query: 242 NRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNTS 616 +RPL+ F GS PP +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL K G+ W+ AG L+Y + + ++ ++I +G EG R A P DPI+P S Sbjct: 53 DRPLYLGPFSGS-PPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG--GPLGEVEDPIYPGGS 193 HSP 2 Score: 67.3958 bits (163), Expect = 1.565e-29 Identity = 36/65 (55.38%), Postives = 43/65 (66.15%), Query Frame = 1 Query: 637 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPVM 831 YPGG FDPLG PE EL+ KE+KNGRLAM ++ G + Q I TG GPI +L HLADP + Sbjct: 189 YPGGS-FDPLGLAD-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAV 251
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.565e-29 Identity = 56/157 (35.67%), Postives = 80/157 (50.96%), Query Frame = 2 Query: 203 TRSVSVSAAAADPNRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNTS 616 T+ VS + P+R + F G PP +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL++ G+ W+ AG L+Y + + ++ ++I +G EG R A P TDPI+P S Sbjct: 38 TKQVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAG--GPLGEVTDPIYPGGS 191 HSP 2 Score: 67.3958 bits (163), Expect = 1.565e-29 Identity = 37/68 (54.41%), Postives = 44/68 (64.71%), Query Frame = 1 Query: 625 TDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPV 828 TD YPGG FDPLG PE EL+ KE+KNGRLAM ++ G + Q I TG GP+ +L HLA PV Sbjct: 183 TDPIYPGGS-FDPLGLAD-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAGPV 248
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.653e-29 Identity = 40/110 (36.36%), Postives = 60/110 (54.55%), Query Frame = 2 Query: 275 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRR 556 P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PE+L+K G+ W+ AG L+Y + ++ +++ +G+ EG R Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYR 175 HSP 2 Score: 70.8626 bits (172), Expect = 2.653e-29 Identity = 39/69 (56.52%), Postives = 45/69 (65.22%), Query Frame = 1 Query: 622 GTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPV 828 G D YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GPI +L H+ADPV Sbjct: 184 GLDKIYPGGA-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHVADPV 250 The following BLAST results are available for this feature:
BLAST of EY649928 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 79
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Sequences
The
following sequences are available for this feature:
EST sequence >EY649928 ID=EY649928; Name=EY649928; organism=Citrus sinensis; type=EST; length=954bpback to top |