EY649928

Overview
NameEY649928
Unique NameEY649928
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length954
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.466e-30
Identity = 47/130 (36.15%), Postives = 68/130 (52.31%), Query Frame = 2
Query:  275 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNTS 616
            P +L G  PGD+G+D  GL +DPET   N + E++HCRWAMLGA G   PELL + G+      W+ AG        L+Y  + +         ++  +++ +G  EG R A    P    TDP++P  S
Sbjct:   68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAG--GPLGEVTDPLYPGGS 195          

HSP 2 Score: 72.4034 bits (176), Expect = 2.466e-30
Identity = 39/68 (57.35%), Postives = 46/68 (67.65%), Query Frame = 1
Query:  625 TDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPV 828
            TD  YPGG  FDPLG     PE   EL+ KEIKNGRLAM ++ G + Q I TG GP+ +L+ HLADPV
Sbjct:  187 TDPLYPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLDNLVDHLADPV 252          
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 4.181e-30
Identity = 50/141 (35.46%), Postives = 73/141 (51.77%), Query Frame = 2
Query:  239 PNRPLWF-PGSTP-PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFP 607
            P+RP +  P S   P +L G  PGD+G+D  GL +DPET   N + E++HCRWAMLGA G   PE+L+K G+      W+ AG        L+Y  +           ++  +++ +G+ EG R      P     DPI+P
Sbjct:   52 PDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGG--GPLGEGLDPIYP 190          

HSP 2 Score: 71.2478 bits (173), Expect = 4.181e-30
Identity = 39/69 (56.52%), Postives = 45/69 (65.22%), Query Frame = 1
Query:  622 GTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPV 828
            G D  YPGG  FDPLG     P+   EL+ KEIKNGRLAM ++ G + Q I TG GPI +L  HLADPV
Sbjct:  184 GLDPIYPGGA-FDPLGLAD-DPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPV 250          
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.184e-30
Identity = 55/157 (35.03%), Postives = 81/157 (51.59%), Query Frame = 2
Query:  203 TRSVSVSAAAADPNRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNTS 616
            ++SVS  +    P+R  +   F G  PP +L G  PGD+G+D  GL +DPET   N + E++H RWAMLGA G   PELL++ G+      W+ AG        L+Y  + +         ++  +++ +G  EG R A    P    TDPI+P  S
Sbjct:   30 SKSVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG--GPLGEVTDPIYPGGS 183          

HSP 2 Score: 70.0922 bits (170), Expect = 4.184e-30
Identity = 38/68 (55.88%), Postives = 45/68 (66.18%), Query Frame = 1
Query:  625 TDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPV 828
            TD  YPGG  FDPLG     PE   EL+ KE+KNGRLAM ++ G + Q I TG GP+ +L  HLADPV
Sbjct:  175 TDPIYPGGS-FDPLGLAD-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 240          
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.083e-30
Identity = 56/157 (35.67%), Postives = 79/157 (50.32%), Query Frame = 2
Query:  200 GTRSVSVSAAAA--DPNRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAG---------------ELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFP 607
            G +SV+ S  +    P+R L+   F G  PP +L G  PGD+G+D  GL +DPET   N + E++H RWAMLGA G   PELL + G+      W+ AG               +L +      ++  ++I +G  EG R A    P    TDPI+P
Sbjct:   50 GKKSVAASIDSPWYGPDRVLYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAG--GPLGEVTDPIYP 203          

HSP 2 Score: 70.0922 bits (170), Expect = 7.083e-30
Identity = 39/68 (57.35%), Postives = 45/68 (66.18%), Query Frame = 1
Query:  625 TDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPV 828
            TD  YPGG  FDPLG     P+   EL+ KEIKNGRLAM ++ G + Q I TG GPI +L  HLADPV
Sbjct:  198 TDPIYPGGN-FDPLGLAD-DPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 263          
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 9.231e-30
Identity = 46/128 (35.94%), Postives = 66/128 (51.56%), Query Frame = 2
Query:  272 PPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWA---------DIIKPG 580
            PP +L G  PGD+G+D  GL +DPET   N + E++HCRWAMLGA G   PELL + G+      W+ AG        L+Y  + +         ++  ++I +G  EG R A         D++ PG
Sbjct:   65 PPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGEGPLGEAEDLLYPG 192          

HSP 2 Score: 70.4774 bits (171), Expect = 9.231e-30
Identity = 38/67 (56.72%), Postives = 46/67 (68.66%), Query Frame = 1
Query:  628 DVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPV 828
            D+ YPGG  FDPLG  +  PE   EL+ KEIKNGRLAM ++ G + Q I TG GP+ +L  HLADPV
Sbjct:  187 DLLYPGGS-FDPLGLAT-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 251          
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.204e-29
Identity = 50/131 (38.17%), Postives = 69/131 (52.67%), Query Frame = 2
Query:  272 PPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNTS 616
            PP +L G  PGD+G+D  GL +DPET   N + E++H RWAMLGA G   PELL + G+     SW+ AG        L+Y  + +         ++  ++I +G  EG R A    P    TDPI+P  S
Sbjct:   45 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEASWFKAGSQIFSEGGLDYLGNQSLIHAQSILAIWATQVILMGAVEGYRIAG--GPLGEVTDPIYPGGS 173          

HSP 2 Score: 67.0106 bits (162), Expect = 1.204e-29
Identity = 37/68 (54.41%), Postives = 44/68 (64.71%), Query Frame = 1
Query:  625 TDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPV 828
            TD  YPGG  FDPL      PE   EL+ KEIKNGRLAM ++ G + Q I TG GP+ +L  HLA+PV
Sbjct:  165 TDPIYPGGS-FDPLALAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAEPV 230          
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.565e-29
Identity = 53/156 (33.97%), Postives = 79/156 (50.64%), Query Frame = 2
Query:  206 RSVSVSAAAADPNRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNTS 616
            + VS S+    PNR  +   F G +P  +L G  PGD+G+D  GL +DPET   N + E++HCRWAMLGA G   PELL + G+      W+  G        L+Y  + +         ++  +++ +G  EG R A   +P     DP++P  S
Sbjct:   43 KPVSSSSPWYGPNRVKYLGPFSGESP-SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG--EPLGEVVDPLYPGGS 195          

HSP 2 Score: 68.9366 bits (167), Expect = 1.565e-29
Identity = 37/64 (57.81%), Postives = 43/64 (67.19%), Query Frame = 1
Query:  637 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPV 828
            YPGG  FDPLG     PE   EL+ KEIKNGRLAM ++ G + Q I TG GP+ +L  HLADPV
Sbjct:  191 YPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 252          
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.565e-29
Identity = 55/144 (38.19%), Postives = 75/144 (52.08%), Query Frame = 2
Query:  242 NRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNTS 616
            +RPL+   F GS PP +L G  PGD+G+D  GL +DPET   N + E++H RWAMLGA G   PELL K G+      W+ AG        L+Y  + +         ++  ++I +G  EG R A    P     DPI+P  S
Sbjct:   53 DRPLYLGPFSGS-PPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG--GPLGEVEDPIYPGGS 193          

HSP 2 Score: 67.3958 bits (163), Expect = 1.565e-29
Identity = 36/65 (55.38%), Postives = 43/65 (66.15%), Query Frame = 1
Query:  637 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPVM 831
            YPGG  FDPLG     PE   EL+ KE+KNGRLAM ++ G + Q I TG GPI +L  HLADP +
Sbjct:  189 YPGGS-FDPLGLAD-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAV 251          
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.565e-29
Identity = 56/157 (35.67%), Postives = 80/157 (50.96%), Query Frame = 2
Query:  203 TRSVSVSAAAADPNRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNTS 616
            T+ VS  +    P+R  +   F G  PP +L G  PGD+G+D  GL +DPET   N + E++H RWAMLGA G   PELL++ G+      W+ AG        L+Y  + +         ++  ++I +G  EG R A    P    TDPI+P  S
Sbjct:   38 TKQVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAG--GPLGEVTDPIYPGGS 191          

HSP 2 Score: 67.3958 bits (163), Expect = 1.565e-29
Identity = 37/68 (54.41%), Postives = 44/68 (64.71%), Query Frame = 1
Query:  625 TDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPV 828
            TD  YPGG  FDPLG     PE   EL+ KE+KNGRLAM ++ G + Q I TG GP+ +L  HLA PV
Sbjct:  183 TDPIYPGGS-FDPLGLAD-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAGPV 248          
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.653e-29
Identity = 40/110 (36.36%), Postives = 60/110 (54.55%), Query Frame = 2
Query:  275 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRR 556
            P +L G  PGD+G+D  GL +DPET   N + E++HCRWAMLGA G   PE+L+K G+      W+ AG        L+Y  +           ++  +++ +G+ EG R
Sbjct:   66 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYR 175          

HSP 2 Score: 70.8626 bits (172), Expect = 2.653e-29
Identity = 39/69 (56.52%), Postives = 45/69 (65.22%), Query Frame = 1
Query:  622 GTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPV 828
            G D  YPGG  FDPLG     PE   EL+ KEIKNGRLAM ++ G + Q I TG GPI +L  H+ADPV
Sbjct:  184 GLDKIYPGGA-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHVADPV 250          
The following BLAST results are available for this feature:
BLAST of EY649928 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
CB27_TOBAC2.466e-3036.15Chlorophyll a-b binding protein 7, chloroplastic O... [more]
CB21_GOSHI4.181e-3035.46Chlorophyll a-b binding protein 151, chloroplastic... [more]
CB21_CUCSA4.184e-3035.03Chlorophyll a-b binding protein of LHCII type I, c... [more]
CB2A_PINSY7.083e-3035.67Chlorophyll a-b binding protein type 2 member 1A, ... [more]
CB21_SINAL9.231e-3035.94Chlorophyll a-b binding protein 1, chloroplastic O... [more]
CB21_SOYBN1.204e-2938.17Chlorophyll a-b binding protein, chloroplastic (Fr... [more]
CB23_NICPL1.565e-2933.97Chlorophyll a-b binding protein C, chloroplastic O... [more]
CB23_POLMU1.565e-2938.19Chlorophyll a-b binding protein type 1 member F3, ... [more]
CB23_SOYBN1.565e-2935.67Chlorophyll a-b binding protein 3, chloroplastic O... [more]
CB26_PETSP2.653e-2936.36Chlorophyll a-b binding protein 37, chloroplastic ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-005-B07-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649928 ID=EY649928; Name=EY649928; organism=Citrus sinensis; type=EST; length=954bp
CGGTCCTCGGTNCCGGNATTCCCGGCCTCGACCCACGCGTCCGCGGACGC
GTGGGAAAATGGCTTCCGTTTGTGCTTCCCCTGCCGTTGCAGCCATCTCA
TCCCCCAGTTCTCAGAAGAGTAGATCAGTTGCGGGAGCAACAAAGGCTTC
TTTCCTTGGTGGGAAGAAGCTGAAATTGAGAAAAAACGGAGCAACAGCGG
GAACACGATCGGTTTCAGTGAGTGCGGCTGCAGCTGATCCTAACAGGCCT
CTCTGGTTCCCAGGCAGCACTCCTCCTGAATGGCTCGATGGTAGCCTCCC
CGGAGACTTCGGCTTCGATCCTCTTGGTCTTGGATCTGATCCTGAGACGC
TGAGATGGAACGTGCAATCAGAAATTGTGCACTGCAGATGGGCAATGTTA
GGAGCTGCAGGAATTTTCATTCCGGAATTGTTAACAAAACTTGGAATCCT
CAACACTCCATCCTGGTACACAGCTGGGGAGCTAGAGTACTTCACAGACA
CCACCACCCTGTTCATTGTTGAGATGATATTCATAGGCTGGGCAGAGGGC
AGACGGTGGGCCGACATTATAAAGCCAGGCTGTGTGAACACTGACCCGAT
CTTCCCCAACACAAGCTCACCGGCACCGATGTTGGGTACCCAGGTGGGCT
TTGGTTTGACCCACTTGGCTGGGGATCCGGTTCGCCCGAGAAGGTAAAGG
AGCTGAGGACTAAGGAGATCAAGAATGGAAGATTGGCTATGTTGGCTGTG
ATGGGGTGCTGGTTCCAGCACATTTACACCGGCACCGGCCCCATTNGACA
TCTCATTGCTCACCTTGCTGATCCTGTCATGCCACCGTTTTTGCTGCCTC
ACCCCCAGTGAGATGATGACGAACAAGGGGAGAGAATTTGGCCAGTGGNA
GCTGAGATCAGGNAATGGTGNTCTCTTAGGGAAGGTGATGATAGAAACTG
ATTA
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