EY649928
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.454e-29 Identity = 56/161 (34.78%), Postives = 82/161 (50.93%), Query Frame = 2 Query: 194 TAGT-RSVSVSAAAADPNRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNTS 616 TAG ++V S+ P+R + F G +P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ AG L+Y + + ++ ++I +G EG R A P DP++P S Sbjct: 38 TAGKPKTVQSSSPWYGPDRVKYLGPFSGESP-SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG--GPLGEVVDPLYPGGS 195 HSP 2 Score: 68.9366 bits (167), Expect = 3.454e-29 Identity = 37/64 (57.81%), Postives = 43/64 (67.19%), Query Frame = 1 Query: 637 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPV 828 YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GP+ +L HLADPV Sbjct: 191 YPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 252
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.497e-29 Identity = 51/136 (37.50%), Postives = 70/136 (51.47%), Query Frame = 2 Query: 257 FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNTS 616 F G TP +L+G GD+G+D GL SDPET N + E++H RWAMLGA G PELL K G+ W+ AG L+Y + + ++ +++ +G EG R A P TDPI+P S Sbjct: 64 FSGETP-SYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG--GPLGEVTDPIYPGGS 196 HSP 2 Score: 68.9366 bits (167), Expect = 4.497e-29 Identity = 38/68 (55.88%), Postives = 45/68 (66.18%), Query Frame = 1 Query: 625 TDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPV 828 TD YPGG FDPLG P+ EL+ KEIKNGRLAM ++ G + Q I TG GP+ +L HLADPV Sbjct: 188 TDPIYPGGS-FDPLGLAD-DPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPV 253
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 4.498e-29 Identity = 53/158 (33.54%), Postives = 78/158 (49.37%), Query Frame = 2 Query: 197 AGTRSVSVSAAAADPNRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNTS 616 A + VS S+ +R L+ PP +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ AG L+Y + + ++ +++ +G EG R A P DP++P S Sbjct: 39 AKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAG--GPLGEIVDPLYPGGS 194 HSP 2 Score: 65.855 bits (159), Expect = 4.498e-29 Identity = 35/64 (54.69%), Postives = 42/64 (65.62%), Query Frame = 1 Query: 637 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPV 828 YPGG FDPLG P+ EL+ KEIKNGRLAM ++ G + Q I TG GP+ L H+ADPV Sbjct: 190 YPGGS-FDPLGLAE-RPQAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEDLADHIADPV 251
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB22_ORYSJ (Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 4.499e-29 Identity = 47/131 (35.88%), Postives = 68/131 (51.91%), Query Frame = 2 Query: 272 PPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNTS 616 PP +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL + G+ W+ AG L+Y + + ++ V+++ +G EG R A P DP++P S Sbjct: 61 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAG--GPLGEVVDPLYPGGS 189 HSP 2 Score: 68.9366 bits (167), Expect = 4.499e-29 Identity = 37/64 (57.81%), Postives = 43/64 (67.19%), Query Frame = 1 Query: 637 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPV 828 YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GP+ +L HLADPV Sbjct: 185 YPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 246
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB25_SOLLC (Chlorophyll a-b binding protein 5, chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.508e-29 Identity = 40/110 (36.36%), Postives = 60/110 (54.55%), Query Frame = 2 Query: 275 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRR 556 P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PE+L+K G+ W+ AG L+Y + ++ +++ +G+ EG R Sbjct: 38 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYR 147 HSP 2 Score: 70.8626 bits (172), Expect = 4.508e-29 Identity = 39/69 (56.52%), Postives = 45/69 (65.22%), Query Frame = 1 Query: 622 GTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPV 828 G D YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GPI +L H+ADPV Sbjct: 156 GLDKIYPGGA-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHIADPV 222
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 4.525e-29 Identity = 47/131 (35.88%), Postives = 68/131 (51.91%), Query Frame = 2 Query: 272 PPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNTS 616 PP +L G PGD+G+D GL +DPET N + E++H WAMLGA G PELL++ G+ W+ AG L+Y + + ++ +++ +G EG R A P TDPI+P S Sbjct: 6 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG--GPLGEVTDPIYPGGS 134 HSP 2 Score: 70.0922 bits (170), Expect = 4.525e-29 Identity = 38/68 (55.88%), Postives = 45/68 (66.18%), Query Frame = 1 Query: 625 TDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPV 828 TD YPGG FDPLG PE EL+ KE+KNGRLAM ++ G + Q I TG GP+ +L HLADPV Sbjct: 126 TDPIYPGGS-FDPLGLAD-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 191
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB2A_PYRPY (Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.851e-29 Identity = 55/157 (35.03%), Postives = 79/157 (50.32%), Query Frame = 2 Query: 200 GTRSVSVSAAAA--DPNRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAG---------------ELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFP 607 G +SV+ S + P+R ++ F G PP +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL + G+ W+ AG +L + ++ ++I +G EG R A P TDPI+P Sbjct: 50 GRKSVAASIDSPWYGPDRVMYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAG--GPLGEVTDPIYP 203 HSP 2 Score: 67.781 bits (164), Expect = 5.851e-29 Identity = 37/68 (54.41%), Postives = 45/68 (66.18%), Query Frame = 1 Query: 625 TDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPV 828 TD YPGG FDPLG P+ +++ KEIKNGRLAM ++ G + Q I TG GPI +L HLADPV Sbjct: 198 TDPIYPGGN-FDPLGLAD-DPDAFADVKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 263
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 5.856e-29 Identity = 50/144 (34.72%), Postives = 73/144 (50.69%), Query Frame = 2 Query: 239 PNRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNTS 616 P+R L+ PP +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ AG L+Y + + ++ +++ +G EG R A P DP++P S Sbjct: 52 PDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG--GPLGEVVDPLYPGGS 193 HSP 2 Score: 66.2402 bits (160), Expect = 5.856e-29 Identity = 35/64 (54.69%), Postives = 43/64 (67.19%), Query Frame = 1 Query: 637 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPV 828 YPGG FDPLG PE EL+ KE+K GRLAML++ G + Q I TG GP+ +L H+ADPV Sbjct: 189 YPGGS-FDPLGLAD-DPEAFGELKVKELKKGRLAMLSMFGFFVQAIVTGKGPLENLADHIADPV 250
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.856e-29 Identity = 46/130 (35.38%), Postives = 68/130 (52.31%), Query Frame = 2 Query: 275 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNTS 616 P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ AG L+Y + + ++ +++ +G EG R A +P DP++P S Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG--EPLGEVVDPLYPGGS 194 HSP 2 Score: 68.1662 bits (165), Expect = 5.856e-29 Identity = 36/64 (56.25%), Postives = 43/64 (67.19%), Query Frame = 1 Query: 637 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPV 828 YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q + TG GP+ +L HLADPV Sbjct: 190 YPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTGKGPLENLADHLADPV 251
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 5.856e-29 Identity = 47/130 (36.15%), Postives = 67/130 (51.54%), Query Frame = 2 Query: 275 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNTS 616 P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ AG L+Y + + ++ ++I +G EG R A P DP++P S Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG--GPLGEVVDPLYPGGS 193 HSP 2 Score: 68.9366 bits (167), Expect = 5.856e-29 Identity = 37/64 (57.81%), Postives = 43/64 (67.19%), Query Frame = 1 Query: 637 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPV 828 YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GP+ +L HLADPV Sbjct: 189 YPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 250 The following BLAST results are available for this feature:
BLAST of EY649928 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 79
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Sequences
The
following sequences are available for this feature:
EST sequence >EY649928 ID=EY649928; Name=EY649928; organism=Citrus sinensis; type=EST; length=954bpback to top |