EY649928
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.388e-27 Identity = 45/130 (34.62%), Postives = 65/130 (50.00%), Query Frame = 2 Query: 275 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNTS 616 P +L G P D+G+D GL +DPET N + E++HCRWAMLGA G PEL + GI W+ AG L+Y + + ++ +++ +G EG R A P DP++P S Sbjct: 68 PSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG--GPLGEVIDPLYPGGS 195 HSP 2 Score: 68.9366 bits (167), Expect = 1.388e-27 Identity = 37/64 (57.81%), Postives = 43/64 (67.19%), Query Frame = 1 Query: 637 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPV 828 YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GP+ +L HLADPV Sbjct: 191 YPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 252
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.807e-27 Identity = 46/130 (35.38%), Postives = 67/130 (51.54%), Query Frame = 2 Query: 275 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNTS 616 P +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL++ G+ W+ AG L+Y + + ++ ++I +G EG R A P DP++P S Sbjct: 69 PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG--GPLGEVVDPLYPGGS 196 HSP 2 Score: 67.0106 bits (162), Expect = 1.807e-27 Identity = 35/64 (54.69%), Postives = 43/64 (67.19%), Query Frame = 1 Query: 637 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPV 828 YPGG FDPLG PE EL+ KE+KNGRLAM ++ G + Q I TG GP+ +L HL+DPV Sbjct: 192 YPGGS-FDPLGLAD-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPV 253
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.808e-27 Identity = 48/141 (34.04%), Postives = 71/141 (50.35%), Query Frame = 2 Query: 239 PNRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFP 607 P+R L+ PP +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL + G+ W+ AG L+Y + + ++ +++ +G EG R A P DP++P Sbjct: 52 PDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEGYRVAG--GPLGEVVDPLYP 190 HSP 2 Score: 66.2402 bits (160), Expect = 1.808e-27 Identity = 34/64 (53.12%), Postives = 43/64 (67.19%), Query Frame = 1 Query: 637 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPV 828 YPGG FDPLG PE +++ KE+KNGRLAM ++ G + Q I TG GP+ +L HLADPV Sbjct: 189 YPGGT-FDPLGLAD-DPEAFADVKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 250
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.781e-27 Identity = 46/130 (35.38%), Postives = 67/130 (51.54%), Query Frame = 2 Query: 275 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNTS 616 P +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL++ G+ W+ AG L+Y + + ++ ++I +G EG R A P DP++P S Sbjct: 29 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG--GPLGEVVDPLYPGGS 156 HSP 2 Score: 65.0846 bits (157), Expect = 6.781e-27 Identity = 35/64 (54.69%), Postives = 42/64 (65.62%), Query Frame = 1 Query: 637 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPV 828 YPGG FDPLG PE EL+ KE+KNGRLAM ++ G + I TG GP+ +L HLADPV Sbjct: 152 YPGGS-FDPLGLAE-VPEAFAELKVKELKNGRLAMFSMFGFFVPAIVTGKGPLENLADHLADPV 213
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.797e-27 Identity = 43/130 (33.08%), Postives = 64/130 (49.23%), Query Frame = 2 Query: 275 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNTS 616 P +L G PGD+G+D GL +DP T N + E++HCRW MLGA G PEL + G+ W+ AG L+Y + + ++ +++ +G EG R A P DP++P S Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG--GPLGEVIDPLYPGGS 194 HSP 2 Score: 68.1662 bits (165), Expect = 8.797e-27 Identity = 37/64 (57.81%), Postives = 42/64 (65.62%), Query Frame = 1 Query: 637 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPV 828 YPGG FDPLG PE EL KEIKNGRLAM ++ G + Q I TG GP+ +L HLADPV Sbjct: 190 YPGGS-FDPLGLAD-DPEAFAELEVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 251
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB22_HORVU (Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.940e-26 Identity = 50/157 (31.85%), Postives = 74/157 (47.13%), Query Frame = 2 Query: 194 TAGTRSVSVSAAAADPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSW-------YTAGELEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNTS 616 TA T+ V D + L P +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL + G+ W ++ G L+Y + + ++ +++ +G EG R A P DP++P S Sbjct: 38 TAATKKVGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLARNGVKFGEAVWFKKGSQIFSEGGLQYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG--GPLGEVVDPLYPGGS 192 HSP 2 Score: 66.2402 bits (160), Expect = 1.940e-26 Identity = 36/64 (56.25%), Postives = 43/64 (67.19%), Query Frame = 1 Query: 637 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPV 828 YPGG FDPLG + E EL+ KEIKNGRLAM ++ G + Q I TG GP+ +L HLADPV Sbjct: 188 YPGGS-FDPLGLADDA-EAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 249
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.523e-26 Identity = 49/139 (35.25%), Postives = 67/139 (48.20%), Query Frame = 2 Query: 239 PNRPLWFPG-----STPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPS--WYTAGELEYFTDTTTLF------------IVEMIFIGWAE------GRRWADIIKPG 580 P+R ++ P S PE+L+G + GD+G+DP GLG PE E++H RWAMLGAAG IPE L K G P W+ G L +T F + E++ +G AE G + D + PG Sbjct: 65 PDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPG 203 HSP 2 Score: 62.003 bits (149), Expect = 2.523e-26 Identity = 33/63 (52.38%), Postives = 42/63 (66.67%), Query Frame = 1 Query: 637 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADP 825 +PGG FDPLG PE+ L+ KEIKNGRLAM A++G + Q TG GP+ +L HL+DP Sbjct: 201 HPGGP-FDPLGLAK-DPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDP 261
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB4A_SOLLC (Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 9.445e-26 Identity = 54/137 (39.42%), Postives = 74/137 (54.01%), Query Frame = 2 Query: 197 AGTRSVSVSAAAADPNRPLWFPGS------TPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTA----GELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKP 577 A + +V AAAA + W P PEWLDGSLPGD+GFDPLGLG DP L+W ++E++H RWAM GIF+ + + + W+ A G + F+ TL ++I +GW E +RW D P Sbjct: 39 ATPKRFTVLAAAAKKS---WIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGI------PWFEAGADPGAIAPFS-FGTLLGTQLILMGWVESKRWVDFFDP 165 HSP 2 Score: 41.2022 bits (95), Expect = 9.445e-26 Identity = 22/53 (41.51%), Postives = 31/53 (58.49%), Query Frame = 1 Query: 634 GYPGGLWFDPLGWGSG--------SPEKVKELRTKEIKNGRLAMLAVMGCWFQ 768 GYPGG +FDPL EK++ L+ EIK+ RLAMLA++ +F+ Sbjct: 191 GYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKVAEIKHARLAMLAMLIFYFE 243
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB4B_SOLLC (Chlorophyll a-b binding protein CP24 10B, chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.711e-25 Identity = 51/126 (40.48%), Postives = 71/126 (56.35%), Query Frame = 2 Query: 218 VSAAAADPNRPLWFPGS------TPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTA----GELEYFTDTTTLFIVEMIFIGWAEGRRWAD 565 V+AAA P + W P PEWLDGSLPGDFGFDPLGLG DP L+W ++E++H RWAM GIF+ + + + W+ A G + F+ +L +++ +GW E +RW D Sbjct: 44 VAAAAVAPKKS-WIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGI------PWFEAGADPGAIAPFS-FGSLLGTQLLLMGWVESKRWVD 161 HSP 2 Score: 40.817 bits (94), Expect = 2.711e-25 Identity = 22/53 (41.51%), Postives = 31/53 (58.49%), Query Frame = 1 Query: 634 GYPGGLWFDPLGWGSG--------SPEKVKELRTKEIKNGRLAMLAVMGCWFQ 768 GYPGG +FDPL EK++ L+ EIK+ RLAMLA++ +F+ Sbjct: 191 GYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKLAEIKHSRLAMLAMLIFYFE 243
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB22_SOYBN (Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max GN=CAB2 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.835e-23 Identity = 38/68 (55.88%), Postives = 46/68 (67.65%), Query Frame = 1 Query: 625 TDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPV 828 TD YPGG FDPLG PE + EL+ KE+KNGRLAM ++ G + Q I TG GP+ +L HLADPV Sbjct: 176 TDPIYPGGS-FDPLGLAD-DPEALAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 241 HSP 2 Score: 60.077 bits (144), Expect = 1.835e-23 Identity = 40/113 (35.40%), Postives = 56/113 (49.56%), Query Frame = 2 Query: 326 GLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNTS 616 GL +DPET N + E++H RWAMLGA G PELL + G+ W+ AG L+Y + + ++ ++I +G EG R A P TDPI+P S Sbjct: 74 GLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAG--GPLGEVTDPIYPGGS 184 The following BLAST results are available for this feature:
BLAST of EY649928 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 79
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Sequences
The
following sequences are available for this feature:
EST sequence >EY649928 ID=EY649928; Name=EY649928; organism=Citrus sinensis; type=EST; length=954bpback to top |