EY649928
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 1.608e-21 Identity = 37/68 (54.41%), Postives = 43/68 (63.24%), Query Frame = 1 Query: 622 GTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADP 825 G D YPG FDPLG P+ EL+ KEIKNGRLAM A +G + Q I TG GPI +L HLA+P Sbjct: 193 GLDPLYPGEA-FDPLGLAD-DPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKGPIENLTDHLANP 258 HSP 2 Score: 58.9214 bits (141), Expect = 1.608e-21 Identity = 46/164 (28.05%), Postives = 73/164 (44.51%), Query Frame = 2 Query: 200 GTRSVSVSAAAADPNRPLWFPGSTP--------PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLT-----KLGILNTPSWYTAG---------------ELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFP 607 G ++VS S+++A+ + P +T P G PGD+G+D GL +DPET + + E++H R +LGA G+ PELL K G + W+ AG L + + V+++ +G EG R P DP++P Sbjct: 43 GAKAVSKSSSSANQ---FYGPDATSGWDLQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYRELELIHARCGLLGALGMVTPELLADEDGIKFG--DAAIWFKAGAAIFQDGGLNYLGNPSLIHAQNIVATLAVQVVLMGLVEGYRVNG--GPAGEGLDPLYP 199
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB4C_ARATH (Chlorophyll a-b binding protein CP29.3, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.3 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.721e-21 Identity = 48/165 (29.09%), Postives = 72/165 (43.64%), Query Frame = 2 Query: 236 DPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNV-------------------------------------------QSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAGELEYFTDT-----------TTLFIVEMIFIGWAEGRRWADI 568 D +R +WFPG+ PPEWLDGS+ GD GFDP GLG E L+++ + E++H RWAMLG G E LT + +W AG++E + TTL +E++ +G+ E +R +++ Sbjct: 53 DGDRLVWFPGANPPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIKPTPFQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEALTGI------AWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVVGYIEFQRNSEL 211 HSP 2 Score: 48.9062 bits (115), Expect = 2.721e-21 Identity = 27/56 (48.21%), Postives = 36/56 (64.29%), Query Frame = 1 Query: 637 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHL 804 YPGG +FDPLG + PEK+ L+ EIK+ RLAM+A + Q +TG GP+ L Sbjct: 218 YPGG-YFDPLGLAA-DPEKLDTLKLAEIKHSRLAMVAFLIFALQAAFTGKGPVSFL 271
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 2.850e-16 Identity = 42/129 (32.56%), Postives = 63/129 (48.84%), Query Frame = 2 Query: 275 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNT 613 P +L G PGD+G+D GL + PET N + E++H R AM A G PELL+ +G W+ AG L+Y + + ++ ++I +G EG R A P TDP++P + Sbjct: 70 PSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCIFPELLSVMGQGFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWTTKVILMGAVEGYRIAR--GPLGEVTDPLYPGS 196 HSP 2 Score: 43.5134 bits (101), Expect = 2.850e-16 Identity = 27/64 (42.19%), Postives = 36/64 (56.25%), Query Frame = 1 Query: 625 TDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHL 816 TD YPG FD LG + E EL+ KE+KNGRLAM ++ G + Q I + + +L HL Sbjct: 189 TDPLYPGS--FDSLGLAEDT-EAFAELKVKELKNGRLAMFSMFGFFVQAIVSRKDRLENLADHL 249
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.695e-14 Identity = 56/165 (33.94%), Postives = 79/165 (47.88%), Query Frame = 2 Query: 197 AGTRSVSVSAAAA------DPNRPLWF-PGST-PPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELL-TKLGI-LNTPSWYTAGE-------LEYF--------TDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNTS 616 AGT+ + A + P+R W P ST P +L G PGD+G+D GL +DPET + + E++H RWA+LGA GI PELL T G+ P W+ AG L+Y + V+++ +G EG R P DP++P S Sbjct: 22 AGTKQTKAAPAKSAGIEWYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLDYLGSPALIHAQNIVATLAVQVVLMGLIEGYRVNG--GPAGEGLDPLYPGES 184
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB21_SILPR (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 2.695e-14 Identity = 38/83 (45.78%), Postives = 49/83 (59.04%), Query Frame = 2 Query: 239 PNRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAG 478 P+RP + P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL K G+ W+ AG Sbjct: 51 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWFKAG 133
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 7.842e-14 Identity = 50/145 (34.48%), Postives = 70/145 (48.28%), Query Frame = 2 Query: 239 PNRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTTTLF--------IVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNTS 616 PNR W + + P +L G PGD+G+D GL +DPET + + E++H RWAMLGA G PELL K G W+ AG L+Y + + + V++I +G EG R P DP++P S Sbjct: 39 PNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCQTPELLAKSGTKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATSAVQVILMGLIEGYRVNG--GPAGEGLDPLYPGES 181
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 7.842e-14 Identity = 34/69 (49.28%), Postives = 45/69 (65.22%), Query Frame = 2 Query: 275 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAG 478 P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PE+L+K G+ W+ AG Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAG 134 HSP 2 Score: 71.2478 bits (173), Expect = 9.634e-12 Identity = 39/69 (56.52%), Postives = 45/69 (65.22%), Query Frame = 1 Query: 622 GTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPV 828 G D YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GPI +L H+ADPV Sbjct: 184 GLDKIYPGGA-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPV 250
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 5.083e-13 Identity = 36/83 (43.37%), Postives = 48/83 (57.83%), Query Frame = 2 Query: 239 PNRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAG 478 P+RP + P +L G PGD+G+D + +DPET N + E++HCRWAMLGA G PELL K G+ W+ AG Sbjct: 53 PDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWFKAG 135 HSP 2 Score: 68.9366 bits (167), Expect = 4.781e-11 Identity = 39/69 (56.52%), Postives = 44/69 (63.77%), Query Frame = 1 Query: 622 GTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGCWFQHIYTGTGPIXHLIAHLADPV 828 G D PGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GPI +L HLADPV Sbjct: 185 GLDPLLPGGA-FDPLGLAD-DPEACAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPV 251
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.303e-12 Identity = 41/103 (39.81%), Postives = 59/103 (57.28%), Query Frame = 2 Query: 194 TAGTRSVSVSAAAAD---PNRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTK-LGI-LNTPSWYTAG 478 T R +V AA + P+R + F + PE+L G PGD+G+D GL +DP+T + E++H RWA+LGA GI PELL++ G+ P W+ AG Sbjct: 18 TRQQRMATVPRAAVEFYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAG 120
BLAST of EY649928 vs. ExPASy Swiss-Prot
Match: LH18_EUGGR (Light-harvesting complex I LH38 proteins (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 7.339e-12 Identity = 34/81 (41.98%), Postives = 43/81 (53.09%), Query Frame = 2 Query: 191 ATAGTRSVSVSAAAADPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELL 433 A T +++ A R LWFP PP +L G GD GFDP GL +DP T +E+ HCR +ML G +PELL Sbjct: 353 ANITTNLAMFASSGAKEERELWFPNIVPPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELL 433 HSP 2 Score: 70.0922 bits (170), Expect = 2.135e-11 Identity = 35/80 (43.75%), Postives = 45/80 (56.25%), Query Frame = 2 Query: 242 NRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAGE 481 + PLWFP + P WL+G GD GFDP GL +DP+T +E+ H R AML G +P+ L K GI WY A + Sbjct: 1 SHPLWFPNTLAPSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGALVPDYLGK-GI-----WYEAAQ 74 The following BLAST results are available for this feature:
BLAST of EY649928 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 79
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Sequences
The
following sequences are available for this feature:
EST sequence >EY649928 ID=EY649928; Name=EY649928; organism=Citrus sinensis; type=EST; length=954bpback to top |