EY649926

Overview
NameEY649926
Unique NameEY649926
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length974
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649926 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.953e-21
Identity = 77/208 (37.02%), Postives = 104/208 (50.00%), Query Frame = 1
Query:  235 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGRPLFNPLGLGKDEKSMKDFKLKEVKNGRLGMVGIWGYLXKVXV 822
            G DRP +    S+Q+ SYL G  PGDYG+D  GLS DPE    F   + L   EVI+ R+AMLGA+G + PEIL K G+   E    WF+ G  I   G  +Y  +P          ++ +++ LMGF E  R                     LG   D  YPG   F+PLGL  D  +  + K+KE+KNGRL M  ++G+  +  V
Sbjct:   49 GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHSRWAMLGALGCVFPEILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGP----------------LGEGLDKVYPGGA-FDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIV 231          
BLAST of EY649926 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 1.169e-20
Identity = 81/219 (36.99%), Postives = 109/219 (49.77%), Query Frame = 1
Query:  202 VRAASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGRPLFNPLGLGKDEKSMKDFKLKEVKNGRLGMVGIWGYLXKVXV 822
            V++A T  +  G DRP +    S Q  SYL G  PGDYG+D  GLS DPE    F + + L   EVI+ R+AMLGA+G + PEIL K G+   E    WF+ G  I   G  +Y  +P          ++  ++ LMGF E  R                     LG   DP YPG   F+PLGL  D  +  + K+KE+KNGRL M  ++G+  +  V
Sbjct:   41 VKSAPTS-IWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPEILSKNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP----------------LGEGLDPIYPGGA-FDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIV 233          
BLAST of EY649926 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.527e-20
Identity = 77/208 (37.02%), Postives = 104/208 (50.00%), Query Frame = 1
Query:  235 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGRPLFNPLGLGKDEKSMKDFKLKEVKNGRLGMVGIWGYLXKVXV 822
            G DRP +    S+Q+ SYL G  PGDYG+D  GLS DPE    F   + L   EVI+ R+AMLGA+G + PEIL K G+   E    WF+ G  I   G  +Y  +P          ++  ++ LMGF E  R                     LG   D  YPG   F+PLGL  D ++  + K+KE+KNGRL M  ++G+  +  V
Sbjct:   51 GEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHCRWAMLGALGCVFPEILSKNGVTFGEAV--WFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGP----------------LGEGLDKIYPGGA-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 233          
BLAST of EY649926 vs. ExPASy Swiss-Prot
Match: CB25_SOLLC (Chlorophyll a-b binding protein 5, chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.994e-20
Identity = 77/208 (37.02%), Postives = 104/208 (50.00%), Query Frame = 1
Query:  235 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGRPLFNPLGLGKDEKSMKDFKLKEVKNGRLGMVGIWGYLXKVXV 822
            G DRP +    S+Q+ SYL G  PGDYG+D  GLS DPE    F   + L   EVI+ R+AMLGA+G + PEIL K G+   E    WF+ G  I   G  +Y  +P          ++  ++ LMGF E  R                     LG   D  YPG   F+PLGL  D ++  + K+KE+KNGRL M  ++G+  +  V
Sbjct:   23 GEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHCRWAMLGALGCVFPEILSKNGVTFGEAV--WFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGP----------------LGEGLDKIYPGGA-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 205          
BLAST of EY649926 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.994e-20
Identity = 76/208 (36.54%), Postives = 104/208 (50.00%), Query Frame = 1
Query:  235 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGRPLFNPLGLGKDEKSMKDFKLKEVKNGRLGMVGIWGYLXKVXV 822
            G+DRPL+    S    SYL G  PGDYG+D  GLS DPE    F + + L   EVI+ R+AMLGA+G + PE+L K G+   E    WF+ G  I   G  +Y  +P          ++  ++ LMG  E  R                     LG   DP YPG   F+PLGL  D ++  + K+KE+KNGRL M  ++G+  +  V
Sbjct:   51 GSDRPLYLGPFSGSPPSYLSGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVTPELLAKNGVKFGEAV--WFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP----------------LGEVEDPIYPGGS-FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIV 233          
BLAST of EY649926 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.605e-20
Identity = 77/208 (37.02%), Postives = 104/208 (50.00%), Query Frame = 1
Query:  235 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGRPLFNPLGLGKDEKSMKDFKLKEVKNGRLGMVGIWGYLXKVXV 822
            G DRP +    S+Q+ SYL G  PGDYG+D  GLS DPE    F   + L   EVI+ R+AMLGA+G + PEIL K G+   E    WF+ G  I   G  +Y  +P          ++  ++ LMGF E  R                     LG   D  YPG   F+PLGL  D ++  + K+KE+KNGRL M  ++G+  +  V
Sbjct:   51 GEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHCRWAMLGALGCVFPEILSKNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGP----------------LGEGLDKIYPGGA-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 233          
BLAST of EY649926 vs. ExPASy Swiss-Prot
Match: CB21_ORYSJ (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 2.605e-20
Identity = 78/217 (35.94%), Postives = 109/217 (50.23%), Query Frame = 1
Query:  208 AASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGRPLFNPLGLGKDEKSMKDFKLKEVKNGRLGMVGIWGYLXKVXV 822
            AAS+     GADR L+    S +  SYL G  PGDYG+D  GLS DPE    F + + L   EVI+ R+AMLGA+G + PE+L + G+   E    WF+ G  I   G  +Y  +P          ++ +++ LMG  E  R                     LG   DP YPG   F+PLGL  D ++  + K+KE+KNGRL M  ++G+  +  V
Sbjct:   42 AASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGP----------------LGEVVDPLYPGGA-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 233          
BLAST of EY649926 vs. ExPASy Swiss-Prot
Match: CB22_ORYSJ (Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 3.402e-20
Identity = 78/225 (34.67%), Postives = 112/225 (49.78%), Query Frame = 1
Query:  184 RKGSFVVRAASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGRPLFNPLGLGKDEKSMKDFKLKEVKNGRLGMVGIWGYLXKVXV 822
            RK +   + A++     GADR L+    S +  SYL G  PGDYG+D  GLS DPE    F + + L   EVI+ R+AMLGA+G + PE+L + G+   E    WF+ G  I   G  +Y  +P          ++ +++ LMG  E  R                     LG   DP YPG   F+PLGL  D ++  + K+KE+KNGRL M  ++G+  +  V
Sbjct:   30 RKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGP----------------LGEVVDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 229          
BLAST of EY649926 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.402e-20
Identity = 78/208 (37.50%), Postives = 102/208 (49.04%), Query Frame = 1
Query:  235 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGRPLFNPLGLGKDEKSMKDFKLKEVKNGRLGMVGIWGYLXKVXV 822
            G DRP +    S+Q  SYL G  PGDYG+D  GLS DPE    F   + L   EVI+ R+AMLGA+G   PE+L K G+   E    WF+ G  I   G  +Y  +P          ++  ++ LMGF E  R                     LG   DP YPG   F+PLGL  D  S  + K+KE+KNGRL M  ++G+  +  V
Sbjct:   51 GPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHSRWAMLGALGCTFPELLEKNGVKFGEAV--WFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGGGP----------------LGEGLDPLYPGGA-FDPLGLADDPDSFAELKVKELKNGRLAMFSMFGFFVQAIV 233          
BLAST of EY649926 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 7.579e-20
Identity = 78/217 (35.94%), Postives = 109/217 (50.23%), Query Frame = 1
Query:  208 AASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGRPLFNPLGLGKDEKSMKDFKLKEVKNGRLGMVGIWGYLXKVXV 822
            +AST P   G DR L+    S +  SYL G  PGDYG+D  GLS DPE    F + + L   EVI+ R+AMLGA+G + PE+L + G+   E    WF+ G  I   G  +Y  +P          ++  ++ LMG  E  R                     LG   DP YPG   F+PLGL +D ++  + K+KE+KNGRL M  ++G+  +  V
Sbjct:   52 SASTSPW-YGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPEN---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGP----------------LGEVTDPIYPGGS-FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 242          
The following BLAST results are available for this feature:
BLAST of EY649926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
CB23_ORYSI8.953e-2137.02Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB21_GOSHI1.169e-2036.99Chlorophyll a-b binding protein 151, chloroplastic... [more]
CB26_PETSP1.527e-2037.02Chlorophyll a-b binding protein 37, chloroplastic ... [more]
CB25_SOLLC1.994e-2037.02Chlorophyll a-b binding protein 5, chloroplastic (... [more]
CB23_POLMU1.994e-2036.54Chlorophyll a-b binding protein type 1 member F3, ... [more]
CB24_SOLLC2.605e-2037.02Chlorophyll a-b binding protein 4, chloroplastic O... [more]
CB21_ORYSJ2.605e-2035.94Chlorophyll a-b binding protein 1, chloroplastic O... [more]
CB22_ORYSJ3.402e-2034.67Chlorophyll a-b binding protein 2, chloroplastic O... [more]
CB215_PEA3.402e-2037.50Chlorophyll a-b binding protein 215, chloroplastic... [more]
CB2B_PINSY7.579e-2035.94Chlorophyll a-b binding protein type 2 member 1B, ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-005-B05-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649926 ID=EY649926; Name=EY649926; organism=Citrus sinensis; type=EST; length=974bp
ATTGGTNACGCCTGCCAGTTCTGGTCCGGNATTCCCGGCTCGACCCCGCG
TCCGANAAACAGAGGAAAAAAGAAATTAAAAATGGCAACCCAAGCTTTGG
TTTCATCATCTCTTACATCTTCAGTGGAGACTGCGAGACAAATTCTTGGA
GCAAGATCAGCTCAATCCCCAACTGGGTCATCAAGAAAAGGTTCCTTTGT
TGTTAGGGCAGCTTCTACTCCTCCTGTTAAGCAAGGAGCAGACAGACCGT
TGTGGTTTGCATCCAAACAAAGCCTTTCATACTTGGATGGCAGCCTCCCC
GGAGACTATGGATTCGACCCACTTGGTCTCTCAGACCCTGAAGGCACAGG
AGGGTTCATTGAGCCAAAATGGCTGGCCTACGGCGAGGTCATCAACGGTC
GTTATGCCATGTTGGGAGCTGTGGGAGCCATTGCACCGGAGATTCTTGGC
AAGGCAGGCCTCATTCCGCAAGAAACTGCCCTGGCCTGGTTCCAAACCGG
TGTGATCCCCCCAGCGGGAACATACAACTACTGGGCAGACCCTTACACAC
TTTTCGTCCTGGAAATGGCACTCATGGGATTTGCCGAGCACCGGAGATTC
CAAGACTGGGCAAATCCAGGATCAATGGGCAGGCAATACTTCCTCGGATT
CGAGAAATACTTGGGAGGATCCGGCGATCCGGCTTACCCTGGGAGACCTC
TATTCAACCCTCTGGGTCTTGGGAAAGATGAGAAGTCAATGAAGGATTTC
AAGCTCAAGGAAGTGAAGAATGGAAGATTGGGCATGGTGGGCATCTGGGG
GTACTTGNTCAAGGTCNNTGTACAGGAGTGGGCCNTACCCAGACCTATGG
GATCACTGGNCTGATCCTGTAAACACAATGGNTTGACTAGCCTCAAGTTC
ACTGAAAGAGAATTTTCTGGTCATGGCTGGGATNATTATNCCAGGCCTGN
ATCCCCACTCTGTCTATCTACTTT
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