EY649926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649926 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.867e-18 Identity = 76/225 (33.78%), Postives = 110/225 (48.89%), Query Frame = 1 Query: 184 RKGSFVVRAASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGRPLFNPLGLGKDEKSMKDFKLKEVKNGRLGMVGIWGYLXKVXV 822 RK + + S+ G+DR L+ S + SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ E WF+ G I G +Y +P ++ ++ LMG E R LG DP YPG F+PLGL + ++ + K+KE+KNGRL M ++G+ + V Sbjct: 35 RKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEAG--WFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAGGP----------------LGEIVDPLYPGGS-FDPLGLAERPQAFAELKVKEIKNGRLAMFSMFGFFVQAIV 234
BLAST of EY649926 vs. ExPASy Swiss-Prot
Match: CB4_SPIOL (Chlorophyll a-b binding protein CP24, chloroplastic OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 3.184e-18 Identity = 72/238 (30.25%), Postives = 114/238 (47.90%), Query Frame = 1 Query: 127 ETARQILGARSAQSPTGSSRKGSFVVRAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPA-GTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGF----EKYLGGSGDPAYPGRPLFNPLGL---------GKDEKSMKDFKLKEVKNGRLGMVGI 795 ++++ +L S S+ VV AA+ P K + +LDGSLPGD+GFDPLGL DP F+ KW E+I+GR+AML +G +G+A T + WF+ G P A +++ TL ++ LMG+ E +R+ D+ +P S ++ + E + +G+ YPG F+PL L D ++ KL E+K+ RL M+ + Sbjct: 24 KSSQSLLFVNSKVGAGVSTTSRKLVVVAAAAAPKKSWIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDP----AFL--KWYREAELIHGRWAMLAVLGI----FVGQAW-----TGIPWFEAGADPGAVAPFSFG----TLLGTQLLLMGWVESKRWVDFFDPDSQSVEWATPWSRTAENFSNSTGEQGYPGGKFFDPLSLAGTISNGVYNPDTDKLERLKLAEIKHARLAMLAM 242
BLAST of EY649926 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 3.184e-18 Identity = 75/220 (34.09%), Postives = 106/220 (48.18%), Query Frame = 1 Query: 199 VVRAASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGRPLFNPLGLGKDEKSMKDFKLKEVKNGRLGMVGIWGYLXKVXV 822 V + S+ G DR + S + SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ E WF+ G I G +Y +P ++ ++ LMG E R LG DP YPG F+PLGL D ++ + K+KE+KNGRL M ++G+ + V Sbjct: 37 VTKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPELLSRNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGP----------------LGEVTDPIYPGGS-FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIV 231
BLAST of EY649926 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 4.159e-18 Identity = 73/208 (35.10%), Postives = 103/208 (49.52%), Query Frame = 1 Query: 235 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGRPLFNPLGLGKDEKSMKDFKLKEVKNGRLGMVGIWGYLXKVXV 822 G DR + S ++ SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ E WF+ G I G +Y +P ++ ++ LMG E R LG DP YPG F+PLGL D ++ + K+KE+KNGRL M ++G+ + V Sbjct: 53 GPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAGGP----------------LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 235
BLAST of EY649926 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 4.159e-18 Identity = 73/208 (35.10%), Postives = 103/208 (49.52%), Query Frame = 1 Query: 235 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGRPLFNPLGLGKDEKSMKDFKLKEVKNGRLGMVGIWGYLXKVXV 822 G DR + S +S SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ E WF+ G I G +Y +P ++ ++ LMG E R LG DP YPG F+PLGL +D ++ + K+K +KNGRL M ++G+ + V Sbjct: 53 GPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGP----------------LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKHIKNGRLAMFSMFGFFVQAIV 235
BLAST of EY649926 vs. ExPASy Swiss-Prot
Match: CB23_APIGR (Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens GN=LHC0 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 4.159e-18 Identity = 73/208 (35.10%), Postives = 104/208 (50.00%), Query Frame = 1 Query: 235 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGRPLFNPLGLGKDEKSMKDFKLKEVKNGRLGMVGIWGYLXKVXV 822 G DR + S ++ SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ E WF+ G I G +Y +P +++ ++ LMG E R LG DP YPG F+PLGL +D + + K+KE+KNGRL M ++G+ + V Sbjct: 50 GPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILSIWATQVILMGAVEGYRVAGGP----------------LGEIVDPLYPGGS-FDPLGLAEDPERSAELKVKELKNGRLAMFSMFGFFVQAIV 232
BLAST of EY649926 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 4.159e-18 Identity = 73/208 (35.10%), Postives = 104/208 (50.00%), Query Frame = 1 Query: 235 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGRPLFNPLGLGKDEKSMKDFKLKEVKNGRLGMVGIWGYLXKVXV 822 G DRP + S+ + SYL G PGDYG+D +S DPE F + + L EVI+ R+AMLGA+G + PE+L K GL E WF+ G I G +Y +P ++ ++ LMG E R G++G DP PG F+PLGL D ++ + K+KE+KNGRL M ++G+ + V Sbjct: 52 GPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLAKNGLKFGEAV--WFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYR----VGGGTLGEGL------------DPLLPGGA-FDPLGLADDPEACAELKVKEIKNGRLAMFSMFGFFVQAIV 234
BLAST of EY649926 vs. ExPASy Swiss-Prot
Match: CB21_MAIZE (Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 4.159e-18 Identity = 73/208 (35.10%), Postives = 102/208 (49.04%), Query Frame = 1 Query: 235 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGRPLFNPLGLGKDEKSMKDFKLKEVKNGRLGMVGIWGYLXKVXV 822 G DR + S + SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ E WF+ G I G +Y +P ++ ++ LMG E R LG DP YPG F+PLGL D ++ + K+KE+KNGRL M ++G+ + V Sbjct: 48 GPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPELLSRNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP----------------LGEVVDPLYPGGS-FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIV 230
BLAST of EY649926 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 5.431e-18 Identity = 73/188 (38.83%), Postives = 97/188 (51.60%), Query Frame = 1 Query: 280 YLDGSLPGDYGFDPLGLSD-PEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAG-TYNYWAD--PYTLF---VLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGRPLFNPLGLGKDEKSMKDFKLKEVKNGRLGMVGIWGYLXKVXV 822 YL+G + GDYG+DP GL PE K+ A+ E+I+ R+AMLGA G I PE L K G A+ WF+TG + G T NY+ P L V E+ L+G AE+ R + L FE D +PG P F+PLGL KD + K+KE+KNGRL M + G+ + V Sbjct: 84 YLNGEVAGDYGYDPFGLGKKPENFA-----KYQAF-ELIHARWAMLGAAGFIIPEALNKYGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLVLAVVAEVVLLGGAEYYRITNG-----------LDFE-------DKLHPGGP-FDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFIQAYV 245
BLAST of EY649926 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 5.431e-18 Identity = 75/217 (34.56%), Postives = 107/217 (49.31%), Query Frame = 1 Query: 208 AASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGRPLFNPLGLGKDEKSMKDFKLKEVKNGRLGMVGIWGYLXKVXV 822 AA++ G DR L+ S + SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ E WF+ G I G +Y +P ++ ++ LMG E R LG DP YPG F+PLGL D ++ + K+KE+K GRL M+ ++G+ + V Sbjct: 42 AAASGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP----------------LGEVVDPLYPGGS-FDPLGLADDPEAFGELKVKELKKGRLAMLSMFGFFVQAIV 233 The following BLAST results are available for this feature:
BLAST of EY649926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
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Sequences
The
following sequences are available for this feature:
EST sequence >EY649926 ID=EY649926; Name=EY649926; organism=Citrus sinensis; type=EST; length=974bpback to top |