EY649925

Overview
NameEY649925
Unique NameEY649925
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length918
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY649925 vs. ExPASy Swiss-Prot
Match: SETD8_BOVIN (Histone-lysine N-methyltransferase SETD8 OS=Bos taurus GN=SETD8 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.701e-11
Identity = 40/111 (36.04%), Postives = 61/111 (54.95%), Query Frame = 2 
Query:  266 GWGLFARRNIQEGEMVLEYRGEQVRRSIADLREVRYRSE-GKDCYLFK---ISEEVVVDATDKGN-IARLINHSCMPNCYARIMSVGDDESRIVLIAKTNVSAGDELTYDY 583
            G G+ A +    GE V+EY G+ +  + A  RE  Y  +    CY++    +S+   VDAT + N + RLINHS   NC  ++  + D    ++LIA  ++ AG+EL YDY
Sbjct:  227 GRGVIATKQFSRGEFVVEYHGDLIEITDAKKREALYAQDPSTGCYMYYFQYLSKTYCVDATRETNRLGRLINHSKCGNCQTKLHDI-DGVPHLILIASRDIEAGEELLYDY 336
The following BLAST results are available for this feature:
BLAST of EY649925 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
SETD8_BOVIN7.701e-1136.04Histone-lysine N-methyltransferase SETD8 OS=Bos ta... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-005-B04-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649925 ID=EY649925; Name=EY649925; organism=Citrus sinensis; type=EST; length=918bp
ATAACTACTGCCCACAAAGTGGGGGGAGCTTGCCATCATTCTTTAGCCAC
CATGCAAAGTTTGAACACATTCAGGGTAGTGGAGGAGCATAAAAGTTTTT
CTTCTTTCCGTGAACGCCTTTACCACTTACAGGCAAATATATATGCTTTC
ATTTTACCCTAGTAATTTTTTAATCAATTCGTCTTTCTGACTATTTTTGG
GTTGGGAAATTTGTCTCCAGAGAACTGAACATGACCGAGTTTGCTTTGGT
AGATCTGGAATACATGGCTGGGGCCTCTTTGCACGTCGGAATATTCAAGA
AGGAGAAATGGTTCTCGAGTATCGTGGTGAACAGGTAAGACGCAGCATTG
CAGATCTCAGAGAGGTGCGCTACCGATCAGAAGGAAAAGACTGCTATCTT
TTCAAGATCAGTGAGGAGGTAGTGGTAGATGCCACCGATAAAGGAAACAT
AGCACGCTTAATCAATCATTCGTGTATGCCAAACTGCTACGCAAGGATAA
TGAGCGTGGGTGATGATGAGAGTCGGATTGTCCTTATTGCTAAGACTAAC
GTATCTGCTGGTGATGAGCTAACGTACGATTACTTATTTGATCCTGATGA
ACCTGAAGAATTCAAAGTCCCCTGTTTATGTAAAGCACCAAACTGCAGAT
AATTCATGAATTAGGATTACGCAGATGACACACAGCANAGTCATTGTTTC
TNCAAAGGAGCACTAACCCCCAAATCCCTTGCCCCTGGGGATTTCACAGT
TCATACAGCCAATTTGTAATTTTTCTCAGAAAGGAATGNGNNATTCTTTT
TCTCATTTCTTTGNCTAGATTTTGGGAAATTTCATGCTAAATAAAAGCAT
AGATTGCCGCTGNTGGGCTCTGCATTTGTGTAAAAAAAAAAAAAGGGCGG
CGTTTAAGATCAAGCTAN
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