EY649919

Overview
NameEY649919
Unique NameEY649919
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length941
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649919 vs. ExPASy Swiss-Prot
Match: PSA6_DROME (Proteasome subunit alpha type-6 OS=Drosophila melanogaster GN=Prosalpha1 PE=2 SV=2)

HSP 1 Score: 251.136 bits (640), Expect = 5.495e-66
Identity = 130/230 (56.52%), Postives = 165/230 (71.74%), Query Frame = 3
Query:   69 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQDTVQTAISTLXSVLQDGFKASDIEVGVVSKENPDFRVL 758
            MSRGS  G+DRHITIFSPEGRL+QVEYAFKA+    +T++ ++  D   V TQKKV +K +   +VTHLF ITK +G   TG  AD+R+ VQ+ARYEAA FR+KYGYEMPVDVL + IAD +QVYTQ+A MRPLG   ++++ D E GP ++K DPAG+F G KA S G K  EA ++LEKK K  P  + +  +Q AIS L SVL   FK + IE+GVVSK +P FR+L
Sbjct:    1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKNIVPETVTHLFRITKDIGCAMTGRIADSRSQVQKARYEAANFRYKYGYEMPVDVLCRRIADINQVYTQNAEMRPLGCSMVLIAYDNEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLEKKYK--PNLSEEKAIQLAISCLSSVLAIDFKPNGIEIGVVSKSDPTFRIL 228          

HSP 2 Score: 22.3274 bits (46), Expect = 5.495e-66
Identity = 9/24 (37.50%), Postives = 14/24 (58.33%), Query Frame = 2
Query:  731 QGESRFQSFVHREIDEHLTAIVNR 802
            + +  F+    REI+EHLT I  +
Sbjct:  220 KSDPTFRILDEREIEEHLTKIAEK 243          
BLAST of EY649919 vs. ExPASy Swiss-Prot
Match: PSA6_DICDI (Proteasome subunit alpha type-6 OS=Dictyostelium discoideum GN=psmA6 PE=3 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 4.747e-64
Identity = 123/238 (51.68%), Postives = 171/238 (71.85%), Query Frame = 3
Query:   69 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQDTVQT-----AISTLXSVLQDGFKASDIEVGVVSKENPDFRVLSIE 767
            MSR    GYD  I IFSP+G+L+Q+EYAFKA+K  G+TS+G+RGKD V V TQKK+PDKL+D  SVT L+ +T Y+G + TG+  D+++   +A  E A F  K+GY++P +VLAK +AD +Q+ TQHA  RPLGV  +++ ID+E GP+LFK DPAG F G+KAT+AG KEQE+ NFLEKK K++P  +  +T+Q      AISTL SVL    K+SD+E+G+ + +N  F +++ E
Sbjct:    1 MSRSGTAGYDMSI-IFSPQGKLYQIEYAFKAIKTGGLTSVGIRGKDCVVVATQKKIPDKLIDPKSVTSLYKLTDYIGCVQTGIVPDSKSQASRAIQECATFHHKFGYQIPPNVLAKRMADIAQLSTQHASARPLGVAMILIGIDDELGPQLFKVDPAGVFTGYKATAAGEKEQESTNFLEKKFKSNPQLSKDETIQVSLIVMAISTLQSVLGADLKSSDLEIGICTMDNRKFVIMTDE 237          
BLAST of EY649919 vs. ExPASy Swiss-Prot
Match: PSA6_YEAST (Proteasome component C7-alpha OS=Saccharomyces cerevisiae GN=SCL1 PE=1 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 8.379e-61
Identity = 123/240 (51.25%), Postives = 165/240 (68.75%), Query Frame = 3
Query:   63 STMSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLE---KKMKND--PAFTFQDTVQTAISTLXSVLQDGFKASDIEVGVVSKENPDFRVLSIE 767
            S  +  S  GYDRHITIFSPEGRL+QVEYAFKA     + S+ VRGKD   V++QKKVPDKLLD T+V+++F I++ +G++  G   DAR    +A+ EAAEFR+KYGY+MP DVLAK +A+ SQ+YTQ AYMRPLGV+   +S+DEE GP ++K DPAG++ G+KAT+ G K+QE    LE   KK K D     +++  V+ AI+ +   L   F  +D+EVGV +K+   F  LS E
Sbjct:    2 SGAAAASAAGYDRHITIFSPEGRLYQVEYAFKATNQTNINSLAVRGKDCTVVISQKKVPDKLLDPTTVSYIFCISRTIGMVVNGPIPDARNAALRAKAEAAEFRYKYGYDMPCDVLAKRMANLSQIYTQRAYMRPLGVILTFVSVDEELGPSIYKTDPAGYYVGYKATATGPKQQEITTNLENHFKKSKIDHINEESWEKVVEFAITHMIDALGTEFSKNDLEVGVATKDK--FFTLSAE 239          
BLAST of EY649919 vs. ExPASy Swiss-Prot
Match: PSA6_CAEEL (Proteasome subunit alpha type-6 OS=Caenorhabditis elegans GN=pas-1 PE=1 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.999e-54
Identity = 103/234 (44.02%), Postives = 160/234 (68.38%), Query Frame = 3
Query:   69 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQDTVQTAISTLXSVLQDGFKASDIEVGVVSKENPDFRVLSIER 770
            MSRGS  G+DRHITIFSPEGR++QVEYAFKA+ +  +T++ V+G D+  +  QK+VPD L+   +VT ++ I++ +G  A GM  DA+  +++A+ EAA +++K GY+MP ++LAK +AD +Q YTQ+A MR LG   + +S D+E GP +++ DPAG++ G K  S G+K+  A +FLEKK+K     T  + ++ AI  L + L    ++ D+EV VV+K+N  F  L+ ++
Sbjct:    1 MSRGSSAGFDRHITIFSPEGRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSLIVADTVTSVYQISQSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYYTQNAEMRSLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQLPATSFLEKKIKKKSELTSTEAIELAIEALQTSLGIDVRSKDLEVVVVTKDNSKFTKLTSDQ 234          
BLAST of EY649919 vs. ExPASy Swiss-Prot
Match: PSMA_METKA (Proteasome subunit alpha OS=Methanopyrus kandleri GN=psmA PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.941e-41
Identity = 88/215 (40.93%), Postives = 135/215 (62.79%), Query Frame = 3
Query:   93 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQDTVQTAISTLXSVLQDGFKASDIEVGVVSKE 737
            YDR IT+FSP+GRLFQVEYA +AVK  G T++G++ ++ V +   K+V  KL++  S+  ++ I  ++G    G+ ADAR LV++AR EA  +R+ YG  + VDVL K I D  QVYTQH  +RP G   ++  +D + G RLF+ DP+G    HKAT+ G   QEA++  E++ + D   T Q+ ++ A+  L    ++   A ++E+ VV K+
Sbjct:   10 YDRAITVFSPDGRLFQVEYAREAVKR-GTTALGIKVEEGVVLGVDKRVTSKLIEPESIEKVYQIDTHIGAATAGLVADARVLVERARIEAQTYRYTYGEPIDVDVLVKAICDLKQVYTQHGGVRPFGTALLIAGVDTK-GCRLFETDPSGALTEHKATAIGEGRQEALDVFEEEYRED--MTLQEAIELAVRALYEASREETTADNLEIAVVDKQ 220          
BLAST of EY649919 vs. ExPASy Swiss-Prot
Match: PSA1_TRYBB (Proteasome subunit alpha type-1 OS=Trypanosoma brucei brucei PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 5.646e-41
Identity = 97/230 (42.17%), Postives = 142/230 (61.74%), Query Frame = 3
Query:   81 SGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID--EECG---PRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTF--QDTVQTAISTLXSVLQDGFKASDIEVGVVSKENPDF 749
            S  G+D++IT+FSPEG L+QVEYAFKAV  AG+ ++ +R KD+V V TQ  VPDKL+   ++T L+ +    G+  TG   D + LVQ+AR EA+E++++YG  M V VLAK   D +QV TQ A MR +G +   + ++  +E G   P+++  DPAG    H A + G K+ EA  FLEKK KN P  T   ++    A++ L S L +  +AS +EVG  + ++  F
Sbjct:    2 SRAGFDKYITVFSPEGSLYQVEYAFKAVTYAGLLTVAIRCKDAVLVFTQHSVPDKLMRPETITSLYNVNDNTGVCITGRAPDGKALVQKARNEASEYKYRYGMPMLVSVLAKPWQDMAQVRTQQAGMRLMGTIMTFVGMEQNDEDGAWIPQIYCVDPAGGAAVH-ACAVGKKQIEACAFLEKKQKNAPFHTLSQKEAAMIALAALQSALGESLRASGVEVGRCTADDHHF 230          
BLAST of EY649919 vs. ExPASy Swiss-Prot
Match: PSMA_METAC (Proteasome subunit alpha OS=Methanosarcina acetivorans GN=psmA PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 5.843e-38
Identity = 85/226 (37.61%), Postives = 129/226 (57.08%), Query Frame = 3
Query:   90 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQDTVQTAISTLXSVLQDGFKASDIEVGVVSKENPDFRVLSIE 767
            GYDR IT+FSP+GRLFQVEYA +AVK  G T++G++  D V ++  K++  +L++  S+  +F I +++G   +G+ ADAR+LV +AR EA   R  Y   + V+V++K I D  Q YTQ+  +RP G   ++  +D+   PRLF+ DP+G    +KAT+ G      +   E   + D        +   +  L    +  F A  +EVGVVS E+  FR L  E
Sbjct:    6 GYDRAITVFSPDGRLFQVEYAREAVKR-GTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDEHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDN-KPRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYRED--MNMDAAILLGMDALYKAAEGKFDAGTLEVGVVSLEDKKFRKLGPE 227          
BLAST of EY649919 vs. ExPASy Swiss-Prot
Match: PSMA_METTE (Proteasome subunit alpha OS=Methanosarcina thermophila GN=psmA PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 9.967e-38
Identity = 85/226 (37.61%), Postives = 129/226 (57.08%), Query Frame = 3
Query:   90 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQDTVQTAISTLXSVLQDGFKASDIEVGVVSKENPDFRVLSIE 767
            GYDR IT+FSP+GRLFQVEYA +AVK  G T++G++  D V ++  K++  +L++  S+  +F I  ++G   +G+ ADAR LV +AR EA   R  Y   + V+V++K I D  Q YTQ+  +RP G   ++  +D++  PRLF+ DP+G    +KAT+ G      +   E   K D     +  +   +  L    +  F A  +EVGVVS ++  FR L  E
Sbjct:    6 GYDRAITVFSPDGRLFQVEYAREAVKR-GTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGAATSGLVADARALVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDK-RPRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYKED--MNIEAAILLGMDALYKAAEGKFDAGTLEVGVVSLQDKKFRKLEPE 227          
BLAST of EY649919 vs. ExPASy Swiss-Prot
Match: PSMA_METBF (Proteasome subunit alpha OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=psmA PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 9.967e-38
Identity = 83/223 (37.22%), Postives = 129/223 (57.85%), Query Frame = 3
Query:   90 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQDTVQTAISTLXSVLQDGFKASDIEVGVVSKENPDFRVL 758
            GYDR IT+FSP+GRLFQVEYA +AVK  G T++G++  D V ++  K++  +L++  S+  +F I  ++G   +G+ ADAR+LV +AR EA   R  Y   + V+V++K I D  Q YTQ+  +RP G   ++  +D+   PRLF+ DP+G    +KAT+ G      +   E + + D        +   +  L    +  F AS +EVG+VS ++  FR L
Sbjct:    8 GYDRAITVFSPDGRLFQVEYAREAVKR-GTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDNL-PRLFETDPSGALLEYKATAIGAGRNAVVEVFEAEYRQD--MNMDAAILLGMDALYRAAEGKFDASTLEVGIVSLQDKKFRKL 226          
BLAST of EY649919 vs. ExPASy Swiss-Prot
Match: PSMA_THESM (Proteasome subunit alpha OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=psmA PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.700e-37
Identity = 85/226 (37.61%), Postives = 139/226 (61.50%), Query Frame = 3
Query:   90 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQDTVQTAISTLXSVLQDGFKASDIEVGVVSKENPDFRVLSIE 767
            GYDR IT+FSP+GRLFQV+YA +AVK  G T++GV+ KD V +  +K+V  KL++  S   +F I  ++   ++G+ ADAR LV +AR EA  +R  YG  +P+ VL K I D  Q++TQ+  +RP G   ++  ++E+  P LF+ DP+G +F  KA + G     A+   E+K +++   T ++ ++ A+  L  ++++    S IEV V+S +   F+ ++ E
Sbjct:    9 GYDRAITVFSPDGRLFQVQYAREAVKR-GATAVGVKCKDGVVLAVEKRVTSKLIEPESYEKIFQIDDHIAAASSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQMHTQYGGVRPFGAALLMAGVNEK--PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEKYRDE--MTLEEAIKLAVLALSKIMEEPSPES-IEVAVISVKEKKFKKITPE 228          
The following BLAST results are available for this feature:
BLAST of EY649919 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 175
Match NameE-valueIdentityDescription
PSA6_DROME5.495e-6656.52Proteasome subunit alpha type-6 OS=Drosophila mela... [more]
PSA6_DICDI4.747e-6451.68Proteasome subunit alpha type-6 OS=Dictyostelium d... [more]
PSA6_YEAST8.379e-6151.25Proteasome component C7-alpha OS=Saccharomyces cer... [more]
PSA6_CAEEL1.999e-5444.02Proteasome subunit alpha type-6 OS=Caenorhabditis ... [more]
PSMA_METKA1.941e-4140.93Proteasome subunit alpha OS=Methanopyrus kandleri ... [more]
PSA1_TRYBB5.646e-4142.17Proteasome subunit alpha type-1 OS=Trypanosoma bru... [more]
PSMA_METAC5.843e-3837.61Proteasome subunit alpha OS=Methanosarcina acetivo... [more]
PSMA_METTE9.967e-3837.61Proteasome subunit alpha OS=Methanosarcina thermop... [more]
PSMA_METBF9.967e-3837.22Proteasome subunit alpha OS=Methanosarcina barkeri... [more]
PSMA_THESM1.700e-3737.61Proteasome subunit alpha OS=Thermococcus sibiricus... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-005-A06-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649919 ID=EY649919; Name=EY649919; organism=Citrus sinensis; type=EST; length=941bp
CCCACGCGTCCGCCCACGCGTCCGGAAGAAAATTGAAAGAGAGGAATCAC
TGTAGCGTATAATCAACAATGAGTAGAGGAAGTGGAGGAGGATACGATCG
TCATATTACAATTTTTTCGCCTGAGGGTCGTCTCTTTCAAGTCGAGTATG
CTTTCAAAGCTGTTAAGGCTGCTGGGGTTACCTCTATTGGTGTTCGAGGA
AAGGATTCAGTCTGTGTTGTGACTCAGAAGAAGGTCCCGGACAAGCTTTT
GGATCATACAAGTGTCACACATCTTTTCCCAATCACAAAGTACCTTGGAT
TGCTGGCAACTGGAATGACAGCTGATGCAAGGACATTGGTTCAGCAGGCA
AGATATGAAGCCGCTGAGTTTCGCTTCAAATATGGATATGAAATGCCTGT
GGATGTGTTAGCCAAATGGATTGCAGACAAATCACAAGTATATACTCAAC
ATGCTTATATGAGACCACTTGGTGTAGTTGCTATGGTTTTGAGTATTGAC
GAAGAATGTGGACCTCGCCTCTTTAAGTGTGACCCTGCTGGCCATTTCTT
TGGCCACAAGGCAACAAGTGCTGGATTGAAGGAGCAAGAGGCAATTAATT
TCTTGGAGAAGAAGATGAAGAATGATCCTGCGTTTACCTTTCAAGATACT
GTGCAGACTGCAATTTCCACCCTGNCATCAGTCCTGCAAGATGGATTTAA
GGCGAGTGATATTGAGGTTGGCGTGGTGAGCAAGGAGAATCCAGATTTCA
GAGTTTTGTCCATCGAGAGATCGATGAGCACTTGACTGCTATAGTGAACA
GATAGGGNAGGTGGTTCATGCCCAGTCACAATGCTGAACCAAAAACAAAA
TGCTTTNCCCTGTATCTGATTATAATTTAAGTGGATTCGGATACCACAGC
CATGGCCTNCAGCAGAACAAACGTGAAAACAGTATGGACTA
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