EY649919

Overview
NameEY649919
Unique NameEY649919
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length941
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649919 vs. ExPASy Swiss-Prot
Match: PSMA_METMA (Proteasome subunit alpha OS=Methanosarcina mazei GN=psmA PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.700e-37
Identity = 85/226 (37.61%), Postives = 128/226 (56.64%), Query Frame = 3
Query:   90 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQDTVQTAISTLXSVLQDGFKASDIEVGVVSKENPDFRVLSIE 767
            GYDR IT+FSP+GRLFQVEYA +AVK  G T++G++  D V ++  K++  +L++  S+  +F I  ++G   +G+ ADAR+LV +AR EA   R  Y   + V+V++K I D  Q YTQ+  +RP G   ++  +D+   PRLF+ DP+G    +KAT+ G      +   E   + D        +   +  L    +  F A  +EVGVVS E+  FR L  E
Sbjct:    8 GYDRAITVFSPDGRLFQVEYAREAVKR-GTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDN-KPRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYRED--MNIDAAILLGMDALYKAAEGKFDAGTLEVGVVSLEDKKFRKLGPE 229          
BLAST of EY649919 vs. ExPASy Swiss-Prot
Match: PSMA_METJA (Proteasome subunit alpha OS=Methanocaldococcus jannaschii GN=psmA PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.900e-37
Identity = 84/225 (37.33%), Postives = 136/225 (60.44%), Query Frame = 3
Query:   93 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQDTVQTAISTLXSVLQDGFKASDIEVGVVSKENPDFRVLSIE 767
            YDR IT+FSPEGRL+QVEYA +AV+  G T+IG+  KD V +   +++  KL+   S+  +F I  ++    +G+ ADAR L+ +AR EA  +R  YG E+ +++LAK I D  Q YTQH  +RP GV  ++  ID+    RLF+ DP+G    +KAT+ G      +  LEK+ ++D   T  + ++ AI+ L    +D  K  +++V +++ ++  F+ + +E
Sbjct:    9 YDRAITVFSPEGRLYQVEYAREAVRR-GTTAIGIACKDGVVLAVDRRITSKLVKIRSIEKIFQIDDHVAAATSGLVADARVLIDRARLEAQIYRLTYGEEISIEMLAKKICDIKQAYTQHGGVRPFGVSLLIAGIDKN-EARLFETDPSGALIEYKATAIGSGRPVVMELLEKEYRDD--ITLDEGLELAITALTKANED-IKPENVDVCIITVKDAQFKKIPVE 228          
BLAST of EY649919 vs. ExPASy Swiss-Prot
Match: PSMA_METPE (Proteasome subunit alpha OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=psmA PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.455e-36
Identity = 79/224 (35.27%), Postives = 133/224 (59.38%), Query Frame = 3
Query:   90 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQDTVQTAISTLXSVLQDGFKASDIEVGVVSKENPDFRVLS 761
            GYDR IT+FSP+GRL+QVEYA +AVK  G T++G++  D + ++  K+V  KLL+ +S+  +F I  ++G+ ++G+  DAR+LV +AR E+   R  Y  ++ V++L+K + D  Q YTQ    RP G   ++  I +    RLF+ DP+G    +KAT  G+     +   E++   +P  + +D +   +  L +  +  F  + +E+GVV+ + P FR +S
Sbjct:    8 GYDRAITVFSPDGRLYQVEYAREAVKR-GTTAVGIKCNDGIVLLVDKRVNSKLLEPSSIEKIFKIDNHIGVASSGLVGDARSLVDRARVESQVNRVSYDEQIDVEMLSKKLCDHMQTYTQFGGARPYGTALLIAGISDG-QFRLFETDPSGTLLEYKATGIGIGRNAVMKVFEEEY--NPEASIRDAILLGLKALHAATEGKFDVNTVEIGVVNNDTPAFRKMS 227          
BLAST of EY649919 vs. ExPASy Swiss-Prot
Match: PSMA_ARCFU (Proteasome subunit alpha OS=Archaeoglobus fulgidus GN=psmA PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 4.188e-36
Identity = 84/226 (37.17%), Postives = 133/226 (58.85%), Query Frame = 3
Query:   90 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQDTVQTAISTLXSVLQDGFKASDIEVGVVSKENPDFRVLSIE 767
            GYDR IT+FSP+GRLFQVEYA +AVK  G T+IG++ K+ V ++  K+V  KLL+  ++  ++ I +++    +G+ ADAR L+ +AR EA   R  Y   + V  LAK I D  Q YTQ+  +RP GV  ++  +DE   P+L++ DP+G    +KAT+ G+       F EK+ ++D   +F D +   +  +   ++      +IEVG V  ++  F+ +S E
Sbjct:    7 GYDRAITVFSPDGRLFQVEYAREAVKR-GATAIGIKCKEGVILIADKRVGSKLLEADTIEKIYKIDEHICAATSGLVADARVLIDRARIEAQINRLTYDEPITVKELAKKICDFKQQYTQYGGVRPFGVSLLIAGVDEV--PKLYETDPSGALLEYKATAIGMGRNAVTEFFEKEYRDD--LSFDDAMVLGLVAMGLSIESELVPENIEVGYVKVDDRTFKEVSPE 227          
BLAST of EY649919 vs. ExPASy Swiss-Prot
Match: PSMA_PYRAB (Proteasome subunit alpha OS=Pyrococcus abyssi GN=psmA PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 5.469e-36
Identity = 84/226 (37.17%), Postives = 134/226 (59.29%), Query Frame = 3
Query:   90 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQDTVQTAISTLXSVLQDGFKASDIEVGVVSKENPDFRVLSIE 767
            GYDR IT+FSP+GRLFQV YA +AVK  G T++GV+ KD V +  +K++  +L++  S   +F I  ++   ++G+ ADAR LV +AR EA   R  YG   P+ V+ K I D  Q++TQ+  +RP G   ++  ++++  P L++ DP+G +F  KA + G     A+   E K ++D   T  + ++ AI  L   ++    A +IEV V++ ++  FR LS E
Sbjct:    9 GYDRAITVFSPDGRLFQVNYAREAVKR-GATAVGVKCKDGVVLAVEKRITSRLIEPESYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGVNDK--PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEDKYRDD--MTLDEAIKLAIFALAKTMEKP-SAENIEVAVITVKDKKFRKLSKE 228          
BLAST of EY649919 vs. ExPASy Swiss-Prot
Match: PSMA_PYRFU (Proteasome subunit alpha OS=Pyrococcus furiosus GN=psmA PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 9.329e-36
Identity = 84/233 (36.05%), Postives = 139/233 (59.66%), Query Frame = 3
Query:   90 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQDTVQTAISTLXSVLQDGFKASDIEVGVVSKENPDFRVLS---IERSMS 779
            GYDR IT+FSP+GRLFQV YA +AVK  G T++GV+  + V +  +K++  +L++  S   +F I  ++   ++G+ ADAR LV +AR EA  +R  YG   PV V+ K I D  Q++TQ+  +RP G   ++  I++   P L++ DP+G +F  KA + G     A+   E+K ++D     +D ++ A+  L   +++   A +IEV V++ ++  FR L+   IE+ +S
Sbjct:    9 GYDRAITVFSPDGRLFQVNYAREAVKR-GATAVGVKCGEGVVLAVEKRITSRLIEPDSYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIYRLTYGEPAPVSVIVKKICDLKQMHTQYGGVRPFGAALLMAGINDR--PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYRDD--MNLEDAIKLALMALAKTMENP-SADNIEVAVITVKDKKFRKLTRDEIEKYLS 235          
BLAST of EY649919 vs. ExPASy Swiss-Prot
Match: PSMA_SULTO (Proteasome subunit alpha OS=Sulfolobus tokodaii GN=psmA PE=3 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 1.218e-35
Identity = 87/232 (37.50%), Postives = 130/232 (56.03%), Query Frame = 3
Query:   90 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQDTVQTAISTLXSVLQDGFK--ASDIEVGVVSKENPDFRVLSIERSMS 779
            GYDR ITIFSP+G L+QV+YAF+AVK  G T++GV+ K  V ++ +K+   +LLD  S+  +F +  ++G    G+ +D R L+  AR +A + R  Y   + +D L K ++D  Q+YTQH  +RP GV  ++  ID    P+L   +P+G F  + A + G     A  + EK  + D     QDT+   I  L S L+ G K   S+IEVG    ++  FR +S E   S
Sbjct:    9 GYDRAITIFSPDGSLYQVDYAFEAVKK-GWTTLGVKTKAGVVLIGEKRKATQLLDVDSIEKVFILDDHVGCSFAGLASDGRILIDYARSQALQHRLIYDEPINIDYLTKLVSDVKQMYTQHGGVRPFGVALIIGGIDRGKTPKLLMTEPSGQFMPYYAVAIGQGGYTATEYFEKNYRED--LNMQDTILLGIRALASTLKPGEKLAPSNIEVGFADVDSGMFRKMSFEERAS 237          
BLAST of EY649919 vs. ExPASy Swiss-Prot
Match: PSMA_PYRHO (Proteasome subunit alpha OS=Pyrococcus horikoshii GN=psmA PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.591e-35
Identity = 82/226 (36.28%), Postives = 135/226 (59.73%), Query Frame = 3
Query:   90 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQDTVQTAISTLXSVLQDGFKASDIEVGVVSKENPDFRVLSIE 767
            GYDR IT+FSP+GRLFQV YA +AVK  G T++GV+  + V +  +K++  +L++  S   +F I  ++   ++G+ ADAR LV +AR EA   R  YG   P+ V+ K I D  Q++TQ+  +RP G   ++  ++E+  P L++ DP+G +F  KA + G     A+   E+K K+D   + ++ ++ AI  L   ++    A +IEV +++ ++  FR LS E
Sbjct:    9 GYDRAITVFSPDGRLFQVNYAREAVKR-GATAVGVKCNEGVVLAVEKRITSRLIEPESYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGVNEK--PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYKDD--MSLEEAIKLAIFALAKTMEKP-SAENIEVAIITVKDKKFRKLSRE 228          
BLAST of EY649919 vs. ExPASy Swiss-Prot
Match: PSMA_METTH (Proteasome subunit alpha OS=Methanobacterium thermoautotrophicum GN=psmA PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.591e-35
Identity = 81/223 (36.32%), Postives = 127/223 (56.95%), Query Frame = 3
Query:   90 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQDTVQTAISTLXSVLQDGFKASDIEVGVVSKENPDFRVL 758
            GYDR IT+FSP+GRLFQVEYA +AVK  G TS+GV+ K+ + +V  K+   KL++  S+  +F I +++G   +G+ ADAR ++++AR EA   R  Y   + V+ LAK I D  Q+YTQH  +RP G   ++  ++   G RLF+ DP+G    +KAT+ G     A+   EKK  +D        ++ A+  +    +       +E+ V+   +  +R L
Sbjct:    8 GYDRAITVFSPDGRLFQVEYAREAVKR-GTTSLGVKSKEGIVLVVDKRPTSKLVEPKSIEKIFQIDEHIGAATSGLVADARAIIEKARLEAQINRITYNEPIRVESLAKKICDMKQMYTQHGGVRPFGTALIIGGVNGR-GCRLFETDPSGALIEYKATAIGAGRPAAMEEFEKKYSDD--MNLNQAIELALDAVYEATEGKTTPESVEIAVIEAADKKYRRL 226          
BLAST of EY649919 vs. ExPASy Swiss-Prot
Match: PSMA_METM5 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=psmA PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 2.078e-35
Identity = 84/226 (37.17%), Postives = 128/226 (56.64%), Query Frame = 3
Query:   90 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQDTVQTAISTLXSVLQDGFKASDIEVGVVSKENPDFRVLSIE 767
            GYDR ITIFSPEGRL+QVEYA +AV+  G T++G++ KD V +   +++  KL+D +S+  +F I  ++    +G+ ADAR L+ +AR EA   R  YG  + V+ LAK I D  Q YTQH   RP G+  ++  ID     RLF+ DP+G    +KAT+ G     A+  LE K   D   T  + ++ A+  L    ++  K  +I++ +V         +S++
Sbjct:    9 GYDRAITIFSPEGRLYQVEYAREAVRR-GTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRH-SARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYSED--MTVNEGMELALYALSKTTEE-LKPENIDMAIVKDSGKLVEKISVD 229          
The following BLAST results are available for this feature:
BLAST of EY649919 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 175
Match NameE-valueIdentityDescription
PSMA_METMA1.700e-3737.61Proteasome subunit alpha OS=Methanosarcina mazei G... [more]
PSMA_METJA2.900e-3737.33Proteasome subunit alpha OS=Methanocaldococcus jan... [more]
PSMA_METPE2.455e-3635.27Proteasome subunit alpha OS=Methanosphaerula palus... [more]
PSMA_ARCFU4.188e-3637.17Proteasome subunit alpha OS=Archaeoglobus fulgidus... [more]
PSMA_PYRAB5.469e-3637.17Proteasome subunit alpha OS=Pyrococcus abyssi GN=p... [more]
PSMA_PYRFU9.329e-3636.05Proteasome subunit alpha OS=Pyrococcus furiosus GN... [more]
PSMA_SULTO1.218e-3537.50Proteasome subunit alpha OS=Sulfolobus tokodaii GN... [more]
PSMA_PYRHO1.591e-3536.28Proteasome subunit alpha OS=Pyrococcus horikoshii ... [more]
PSMA_METTH1.591e-3536.32Proteasome subunit alpha OS=Methanobacterium therm... [more]
PSMA_METM52.078e-3537.17Proteasome subunit alpha OS=Methanococcus maripalu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-005-A06-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649919 ID=EY649919; Name=EY649919; organism=Citrus sinensis; type=EST; length=941bp
CCCACGCGTCCGCCCACGCGTCCGGAAGAAAATTGAAAGAGAGGAATCAC
TGTAGCGTATAATCAACAATGAGTAGAGGAAGTGGAGGAGGATACGATCG
TCATATTACAATTTTTTCGCCTGAGGGTCGTCTCTTTCAAGTCGAGTATG
CTTTCAAAGCTGTTAAGGCTGCTGGGGTTACCTCTATTGGTGTTCGAGGA
AAGGATTCAGTCTGTGTTGTGACTCAGAAGAAGGTCCCGGACAAGCTTTT
GGATCATACAAGTGTCACACATCTTTTCCCAATCACAAAGTACCTTGGAT
TGCTGGCAACTGGAATGACAGCTGATGCAAGGACATTGGTTCAGCAGGCA
AGATATGAAGCCGCTGAGTTTCGCTTCAAATATGGATATGAAATGCCTGT
GGATGTGTTAGCCAAATGGATTGCAGACAAATCACAAGTATATACTCAAC
ATGCTTATATGAGACCACTTGGTGTAGTTGCTATGGTTTTGAGTATTGAC
GAAGAATGTGGACCTCGCCTCTTTAAGTGTGACCCTGCTGGCCATTTCTT
TGGCCACAAGGCAACAAGTGCTGGATTGAAGGAGCAAGAGGCAATTAATT
TCTTGGAGAAGAAGATGAAGAATGATCCTGCGTTTACCTTTCAAGATACT
GTGCAGACTGCAATTTCCACCCTGNCATCAGTCCTGCAAGATGGATTTAA
GGCGAGTGATATTGAGGTTGGCGTGGTGAGCAAGGAGAATCCAGATTTCA
GAGTTTTGTCCATCGAGAGATCGATGAGCACTTGACTGCTATAGTGAACA
GATAGGGNAGGTGGTTCATGCCCAGTCACAATGCTGAACCAAAAACAAAA
TGCTTTNCCCTGTATCTGATTATAATTTAAGTGGATTCGGATACCACAGC
CATGGCCTNCAGCAGAACAAACGTGAAAACAGTATGGACTA
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