EY649917

Overview
NameEY649917
Unique NameEY649917
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length930
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649917 vs. ExPASy Swiss-Prot
Match: VATA_METMA (V-type ATP synthase alpha chain OS=Methanosarcina mazei GN=atpA PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 4.012e-15
Identity = 50/135 (37.04%), Postives = 79/135 (58.52%), Query Frame = 1
Query:   22 PDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGE-PALVAKFKK 423
            PD++ +R +A ++LQ E +L EIVQLVG DAL E  ++ LE  +++RE +L QNAF P D + PF K   +M+ I+ + + A  A++ G       ++  ++K +  D    L   KFE+  EG   A++AK  K
Sbjct:  445 PDYVPMRERAMDMLQTESELQEIVQLVGSDALPEEQQLLLEITRMIREIFLQQNAFHPIDTYSPFEKQYKIMKAIMKWGDAAMDALKSGV------LSSEILKMQSKD---ELPKVKFEEDFEGSLNAVLAKMDK 570          
BLAST of EY649917 vs. ExPASy Swiss-Prot
Match: VATA_STRPI (V-type ATP synthase alpha chain OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=atpA PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.240e-15
Identity = 42/83 (50.60%), Postives = 56/83 (67.47%), Query Frame = 1
Query:   43 TKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 291
            T+A   LQRE  L EIV+LVG D+L+E +++T+E AK +REDYL QNAF   D F  F K   M+ NI+ F + AN A+E G+
Sbjct:  459 TRAMNYLQRESSLEEIVRLVGIDSLSENERLTMEIAKQIREDYLQQNAFDSVDTFTSFAKQEAMLSNILTFADQANHALELGS 541          
BLAST of EY649917 vs. ExPASy Swiss-Prot
Match: VATA_METMJ (V-type ATP synthase alpha chain OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=atpA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.844e-15
Identity = 41/94 (43.62%), Postives = 61/94 (64.89%), Query Frame = 1
Query:   10 RQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 291
            ++  P++  +R  A  VLQ+E +L EIVQLVG DAL + +++T+E A+++RE +L QNA+   D FCP  K   MM+ I H+ +LA  A   GA
Sbjct:  447 KEVSPEWNPLRAWAMGVLQKEAELQEIVQLVGSDALPDEEQVTIEVARMIREIFLQQNAYDAVDTFCPMSKQYDMMKAIKHYADLARTAQTGGA 540          
BLAST of EY649917 vs. ExPASy Swiss-Prot
Match: VATA_HYPBU (V-type ATP synthase alpha chain OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=atpA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.844e-15
Identity = 48/146 (32.88%), Postives = 78/146 (53.42%), Query Frame = 1
Query:   22 PDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRAL 459
            P ++  R +A E+L RED+L EIV+LVG + L+E DK+ LE A +++  +L QNAF P D F    K    +  II FY+ A +A+++G       +T   I+ +L      L+  ++  P +     + K  KL ++L    + L
Sbjct:  455 PKWLEYRNEAYEILLREDELREIVRLVGTEGLSEKDKLILEIANIIKTGFLQQNAFDPVDAFATPQKQWKQLETIIDFYHAALEAIKRG-------VTVKEIREKLAPKIRELILARYNVPND----QLEKLDKLKQELLQALQEL 589          
BLAST of EY649917 vs. ExPASy Swiss-Prot
Match: VATA1_CLOTE (V-type ATP synthase alpha chain 1 OS=Clostridium tetani GN=atpA1 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.844e-15
Identity = 41/88 (46.59%), Postives = 58/88 (65.91%), Query Frame = 1
Query:   25 DFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 288
            D++ +R KA  +LQ E +L EI +LVG DAL+E D++ LE AK LREDYL QNAF   D + P  K   M++ ++ F + A +A+E G
Sbjct:  453 DWVELRQKAMALLQEEANLQEIARLVGIDALSEEDRLKLEVAKSLREDYLQQNAFHDVDTYAPLNKQYRMLKAVLQFGDEARKALESG 540          
BLAST of EY649917 vs. ExPASy Swiss-Prot
Match: VATA_CLOPS (V-type ATP synthase alpha chain OS=Clostridium perfringens (strain SM101 / Type A) GN=atpA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.939e-15
Identity = 43/92 (46.74%), Postives = 60/92 (65.22%), Query Frame = 1
Query:   25 DFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMD 300
            D+  +RT+A  +LQ E +L EIV+LVG DAL+EGD++ LE AK +REDYL QNAF   D +    K   M+  I+ F + A +A+E G  +D
Sbjct:  452 DWSALRTEAMALLQEEANLEEIVRLVGMDALSEGDRLKLEVAKSIREDYLQQNAFHENDTYTSLNKQYKMLNLILSFRHEAEKALEAGVYLD 543          
BLAST of EY649917 vs. ExPASy Swiss-Prot
Match: VATA_CLOPE (V-type ATP synthase alpha chain OS=Clostridium perfringens GN=atpA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.939e-15
Identity = 43/92 (46.74%), Postives = 60/92 (65.22%), Query Frame = 1
Query:   25 DFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMD 300
            D+  +RT+A  +LQ E +L EIV+LVG DAL+EGD++ LE AK +REDYL QNAF   D +    K   M+  I+ F + A +A+E G  +D
Sbjct:  452 DWSALRTEAMALLQEEANLEEIVRLVGMDALSEGDRLKLEVAKSIREDYLQQNAFHENDTYTSLNKQYKMLNLILSFKHEAEKALEAGVYLD 543          
BLAST of EY649917 vs. ExPASy Swiss-Prot
Match: VATA_CLOP1 (V-type ATP synthase alpha chain OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=atpA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.939e-15
Identity = 43/92 (46.74%), Postives = 60/92 (65.22%), Query Frame = 1
Query:   25 DFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMD 300
            D+  +RT+A  +LQ E +L EIV+LVG DAL+EGD++ LE AK +REDYL QNAF   D +    K   M+  I+ F + A +A+E G  +D
Sbjct:  452 DWSALRTEAMALLQEEANLEEIVRLVGMDALSEGDRLKLEVAKSIREDYLQQNAFHENDTYTSLNKQYKMLNLILSFKHEAEKALEAGVYLD 543          
BLAST of EY649917 vs. ExPASy Swiss-Prot
Match: VATA_STRZJ (V-type ATP synthase alpha chain OS=Streptococcus pneumoniae (strain JJA) GN=atpA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.167e-14
Identity = 41/83 (49.40%), Postives = 56/83 (67.47%), Query Frame = 1
Query:   43 TKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 291
            T+A   LQRE  L EIV+LVG D+L++ +++T+E AK +REDYL QNAF   D F  F K   M+ NI+ F + AN A+E G+
Sbjct:  459 TRAMNYLQRESSLEEIVRLVGIDSLSDNERLTMEIAKQIREDYLQQNAFDSVDTFTSFAKQEAMLSNILTFADQANHALELGS 541          
BLAST of EY649917 vs. ExPASy Swiss-Prot
Match: VATA_STRPN (V-type ATP synthase alpha chain OS=Streptococcus pneumoniae GN=atpA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.167e-14
Identity = 41/83 (49.40%), Postives = 56/83 (67.47%), Query Frame = 1
Query:   43 TKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 291
            T+A   LQRE  L EIV+LVG D+L++ +++T+E AK +REDYL QNAF   D F  F K   M+ NI+ F + AN A+E G+
Sbjct:  459 TRAMNYLQRESSLEEIVRLVGIDSLSDNERLTMEIAKQIREDYLQQNAFDSVDTFTSFAKQEAMLSNILTFADQANHALELGS 541          
The following BLAST results are available for this feature:
BLAST of EY649917 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 136
Match NameE-valueIdentityDescription
VATA_METMA4.012e-1537.04V-type ATP synthase alpha chain OS=Methanosarcina ... [more]
VATA_STRPI5.240e-1550.60V-type ATP synthase alpha chain OS=Streptococcus p... [more]
VATA_METMJ6.844e-1543.62V-type ATP synthase alpha chain OS=Methanoculleus ... [more]
VATA_HYPBU6.844e-1532.88V-type ATP synthase alpha chain OS=Hyperthermus bu... [more]
VATA1_CLOTE6.844e-1546.59V-type ATP synthase alpha chain 1 OS=Clostridium t... [more]
VATA_CLOPS8.939e-1546.74V-type ATP synthase alpha chain OS=Clostridium per... [more]
VATA_CLOPE8.939e-1546.74V-type ATP synthase alpha chain OS=Clostridium per... [more]
VATA_CLOP18.939e-1546.74V-type ATP synthase alpha chain OS=Clostridium per... [more]
VATA_STRZJ1.167e-1449.40V-type ATP synthase alpha chain OS=Streptococcus p... [more]
VATA_STRPN1.167e-1449.40V-type ATP synthase alpha chain OS=Streptococcus p... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-005-A04-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649917 ID=EY649917; Name=EY649917; organism=Citrus sinensis; type=EST; length=930bp
CCACGCGTCCGGCAATTTGATCCGGATTTTATTAACATCAGGACAAAGGC
TAGAGAGGTGCTGCAGAGAGAAGATGACCTGAATGAAATTGTGCAACTTG
TCGGAAAGGATGCTTTGGCTGAAGGAGATAAGATTACGCTAGAGACTGCT
AAGCTTTTGAGGGAGGACTATCTTGCTCAGAACGCATTTACTCCATATGA
CAAGTTCTGCCCTTTCTACAAGTCTGTTTGGATGATGCGTAACATTATCC
ATTTCTATAACTTGGCCAATCAGGCCGTAGAGAAAGGAGCTGGTATGGAT
GGTCAGAAGATAACTTACACCCTTATCAAGCATCGGCTGGGAGATCTATT
TTACAGATTAGTATCACAGAAGTTTGAGGACCCAGCAGAAGGAGAACCAG
CTCTGGTTGCTAAATTCAAAAAGCTGCACGAGGATCTGACCGCTGGTTTC
CGCGCCCTCGAGGATGAAACTCGATGATTGAAAGTGTCAAGTTAGATTCT
TTGTAGTCCCAGCGGCACCTCTGATCTTACGGTAACAACAGTTGGCTTCT
CAATGTTCCATTGAATGGAGAACCAAAATGTTGGTGGGTCCATGTTATGC
CACTTTGCAGTGCTTGTTTGGCCTTCTAGTTGCAGTGTGGGAAATTTGAT
TCTATTATGTATTTTTTTGTTCTTCCTGGTCGTCCCTCAATTCCTTTTTT
TGACTAGTGATCAAAAGTTCGAAGTCCAATCCTTATTTATGTATTTATGC
AATAAGTGTGTGTATTGATTTTGNTAAATGGCTTANGATAACTGATGTCC
GTTTTTGGTCTCGTTCTCATTTCTCGTCGCACTCTACGCTTCTCCCATGG
NNTATAAGCAAANTTGTCTATGTACAGCAGCAAATATAAAAAATGGCGNC
GCTCTAAAGATCAAGCTACNTACGCTGCAT
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