EY649913

Overview
NameEY649913
Unique NameEY649913
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length937
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649913 vs. ExPASy Swiss-Prot
Match: DHB12_XENTR (Estradiol 17-beta-dehydrogenase 12 OS=Xenopus tropicalis GN=hsd17b12 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.027e-11
Identity = 56/211 (26.54%), Postives = 102/211 (48.34%), Query Frame = 3
Query:  225 GLSTLVTGGASGIGRALSLSLARKGVFVTVVDFSE*KGKEVASLVEK*NAKFHSNLRFPSAMFIRCDVANTRDTAAAFEKHVATYGGLD---------ICINGAGISNPIP-FPKDQTDGTRSWRFTLDVNLIAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPMYNDPIYSAXKGGVVLFTKSL-TSYKRKGIRINVLCPEFVQTEMA 824
            G   +VTG   GIG+A +  LA++G+ + ++  S  K +EVA  +++   KF                  T+  AA F K    YG ++         + +N  G+S   P +  +  D   +    +++N+ +V   T+  +  M    + GVI+N+ S++G+YP+    +YSA K  V  F++ L   Y+ KG+ +  + P +V T++A
Sbjct:   56 GKWAVVTGATDGIGKAYAEELAKRGMNIVLISRSPEKLEEVAKQIKE---KFK---------------VETKIIAADFGKPTEIYGRIESGLRDLEIGVLVNNVGVSYEHPEYFLEIPDLENTLDKMININITSVCQMTRLVLPGMLGRGR-GVILNISSASGMYPVPLLTVYSATKAFVDFFSRGLQAEYRSKGVTVQSVLPFYVATKLA 247          
BLAST of EY649913 vs. ExPASy Swiss-Prot
Match: DHB12_HUMAN (Estradiol 17-beta-dehydrogenase 12 OS=Homo sapiens GN=HSD17B12 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 6.027e-11
Identity = 60/208 (28.85%), Postives = 107/208 (51.44%), Query Frame = 3
Query:  222 PGLS--TLVTGGASGIGRALSLSLARKGVFVTVVDFSE*KGKEVASLVEK*NAKFHSNLRFPSAMFIRCDVANTRDTAAAFEKHVATYGGLD--ICINGAGISNPIP-FPKDQTDGTRSWRFTLDVNLIAVIDCTQKAI-GIMQAAKKPGVIINMGSSAGLYPMYNDPIYSAXKGGVVLFTKSL-TSYKRKGIRINVLCPEFVQTEMA 824
            PGL    +VTG   GIG++ +  LA+ G+ V ++  S+ K  +V+S +++   KF    R  +  F   D+         ++K      GL+  I +N  G+S   P +  D  D     +  +++N+++V   TQ  + G+++ +K  G I+N+ S +G+ P+    IYSA K  V  F++ L   Y+ KG+ +  + P FV T++A
Sbjct:   47 PGLGEWAVVTGSTDGIGKSYAEELAKHGMKVVLISRSKDKLDQVSSEIKE---KFKVETRTIAVDFASEDI---------YDKIKTGLAGLEIGILVNNVGMSYEYPEYFLDVPDLDNVIKKMININILSVCKMTQLVLPGMVERSK--GAILNISSGSGMLPVPLLTIYSATKTFVDFFSQCLHEEYRSKGVFVQSVLPYFVATKLA 240          
BLAST of EY649913 vs. ExPASy Swiss-Prot
Match: DHG_BACME (Glucose 1-dehydrogenase OS=Bacillus megaterium PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.871e-11
Identity = 54/198 (27.27%), Postives = 91/198 (45.96%), Query Frame = 3
Query:  225 GLSTLVTGGASGIGRALSLSLARKGVFVTVVDFSE*KGKEVASLVEK*NAKFHSNLRFPSAMFIRCDVANTRDTAAAFEKHVATYGGLDICINGAGISNPIPFPKDQTDGTRSWRFTLDVNLIAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPMYNDPIYSAXKGGVVLFTKSLT-SYKRKGIRINVLCPEFVQT 815
            G   ++TG ++G+G+++++  A +   V VV++   K  E  S++E+        +     + +  DV N   +A      +  +G LD+ IN AG+ NP+            W   +D NL      +++AI         G +INM S     P      Y+A KGG+ L T++L   Y  KGIR+N + P  + T
Sbjct:    7 GKVVVITGSSTGLGKSMAIRFATEKAKV-VVNYRS-KEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSA------IKEFGKLDVMINNAGLENPV---SSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINT 193          
The following BLAST results are available for this feature:
BLAST of EY649913 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 103
Match NameE-valueIdentityDescription
DHB12_XENTR6.027e-1126.54Estradiol 17-beta-dehydrogenase 12 OS=Xenopus trop... [more]
DHB12_HUMAN6.027e-1128.85Estradiol 17-beta-dehydrogenase 12 OS=Homo sapiens... [more]
DHG_BACME7.871e-1127.27Glucose 1-dehydrogenase OS=Bacillus megaterium PE=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-004-H12-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649913 ID=EY649913; Name=EY649913; organism=Citrus sinensis; type=EST; length=937bp
CCAGTGCCGCGCAAATTGTGGTCCGGCGAGGAGAATGGGAAGCCGTCTTG
ATAACATCACCCCTTCATTTGGCAATTTATAGTAACAACAAATTTCAGTA
TGTTACAAATAAATACCCGGAAAAAGGGACAGTAAAAGCCCGCTCACATA
ATAAAACTCTTAACCGAGTAATTTAATCGCTTCCCTTTGACTCTCTGCCT
GTTCATAAAATGGAGCTCAAGCCGGGCTTATCAACTTTGGTCACCGGCGG
TGCATCTGGGATTGGTAGAGCTTTGAGTTTATCTCTTGCAAGGAAGGGAG
TCTTTGTGACAGTTGTTGATTTCTCTGAATAAAAGGGAAAGGAAGTTGCA
TCGCTTGTTGAAAAATAGAATGCCAAGTTTCATTCAAACTTAAGATTTCC
ATCTGCTATGTTTATAAGATGTGATGTGGCCAACACAAGAGATACAGCTG
CTGCTTTTGAGAAGCACGTAGCTACATATGGAGGATTGGATATATGTATC
AACGGTGCTGGGATAAGTAATCCTATTCCATTCCCAAAGGATCAAACTGA
TGGCACACGTTCATGGAGATTCACTCTTGATGTGAACTTGATTGCAGTTA
TTGATTGCACTCAGAAAGCTATTGGAATTATGCAAGCTGCAAAAAAGCCT
GGAGTGATTATAAATATGGGATCTTCTGCAGGTCTTTATCCAATGTACAA
TGATCCTATCTACTCTGCTTNCAAAGGTGGTGTTGTTTTATTTACTAAAT
CACTTACTTCCTACAAACGCAAGGGAATTCGCATCAATGTGCTGTGCCCT
GAGTTTGTTCAAACTGAGATGGCATTAAAGGTGGGCTTCAAATTATTGAT
CTGATGGGGGGCTTTTACCTATGGAAATGGAGTGAAAGGTGCTTTTGACT
TATACTGACGAGAGTAAGCTGATCTGCCTATGATACA
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