EY649913

Overview
NameEY649913
Unique NameEY649913
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length937
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649913 vs. ExPASy Swiss-Prot
Match: DHB12_MOUSE (Estradiol 17-beta-dehydrogenase 12 OS=Mus musculus GN=Hsd17b12 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.586e-11
Identity = 57/201 (28.36%), Postives = 109/201 (54.23%), Query Frame = 3
Query:  237 LVTGGASGIGRALSLSLARKGVFVTVVDFSE*KGKEVASLVEK*NAKFHSNLRFPSAMFIRCDVANTRDTAAAFEKHVATYGGLDI--CINGAGISNPIP-FPKDQTDGTRSWRFTLDVNLIAVIDCTQKAI-GIMQAAKKPGVIINMGSSAGLYPMYNDPIYSAXKGGVVLFTKSL-TSYKRKGIRINVLCPEFVQTEMA 824
            +VTGG  GIG+A +  LA++G+ + ++  S+ K  +V++ +++   KF+   R  +  F   D+         ++K      GL+I   +N  G+S   P +  +  D   + +  +++N+++V   T+  + G+++ +K  GVI+N+ S++G+ P+    IYSA K  V  F++ L   YK KGI +  + P  V T++A
Sbjct:   54 VVTGGTDGIGKAYAEELAKRGMKIVLISRSQDKLNQVSNNIKE---KFNVETRTIAVDFSLDDI---------YDKIKTGLSGLEIGVLVNNVGMSYEYPEYFLEIPDLDNTIKKLININVLSVCKVTRLVLPGMVERSK--GVILNISSASGMLPVPLLTIYSATKAFVDFFSQCLHEEYKSKGIFVQSVMPYLVATKLA 240          
BLAST of EY649913 vs. ExPASy Swiss-Prot
Match: ACT3_STRCO (Putative ketoacyl reductase OS=Streptomyces coelicolor GN=actIII PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.586e-11
Identity = 65/203 (32.02%), Postives = 97/203 (47.78%), Query Frame = 3
Query:  237 LVTGGASGIGRALSLSLARKGVFVTVVDFSE*KGKEVASLVEK*NAKFHSNLRFPSAMFIRCDVANTRDTAAAFEKHVATYGGLDICINGAGISNPIPFPKDQTDGTRSWRFTLDVNLIAVIDCTQ---KAIGIMQAAKKPGVIINMGSSAGLYPMYNDPIYSAXKGGVVLFTKSL-TSYKRKGIRINVLCPEFVQTEMALKV 833
            LVTG  SGIG  ++  L ++G+ V V    E +G    +L E   A   ++ R        CDV +  +  A     V  YG +D+ +N AG        +   +    W   ++ NL  V   T+   KA G+++  +  G I+N+ S+ G   + +   YSA K GVV FTK+L     R GI +N +CP FV+T MA  V
Sbjct:   10 LVTGATSGIGLEIARRLGKEGLRVFVCARGE-EGLRT-TLKELREAGVEADGR-------TCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADE---LWLDVVETNLTGVFRVTKQVLKAGGMLE--RGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASV 198          
BLAST of EY649913 vs. ExPASy Swiss-Prot
Match: FABG_CHLPN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia pneumoniae GN=fabG PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.705e-11
Identity = 55/212 (25.94%), Postives = 88/212 (41.51%), Query Frame = 3
Query:  225 GLSTLVTGGASGIGRALSLSLARKGVFVTVVDFSE*KGKEVASLVEK*NAKFHSNLRFPSAMFIRCDVANTRDTAAAFEKHVATYGGLDICINGAGISNPIPFPKDQTDGTRSWRFTLDVNLIAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPMYNDPIYSAXKGGVVLFTKSLT-SYKRKGIRINVLCPEFVQTEMALKVGFKLLI*W 857
            G   +VTGG+ GIG  +       G  V +   +E +G+ V   +     +           F R DV++        +K +  +  +DI +N AGI+      +   D    W+  +  NL ++       I  M  A+  G IIN+ S            Y+A K G++ FTKSL      + IR+N L P F++T+M   +   L   W
Sbjct:    7 GKKVIVTGGSRGIGLGIVKLFLENGADVEIWGLNEERGQAVIESLTGLGGE---------VSFARVDVSHNGGVKDCVQKFLDKHNKIDILVNNAGITRDNLLMRMSED---DWQSVISTNLTSLYYTCSSVIRHMIKARS-GSIINVASIVAKIGSAGQTNYAAAKAGIIAFTKSLAKEVAARNIRVNCLAPGFIETDMTSVLNDNLKAEW 205          
BLAST of EY649913 vs. ExPASy Swiss-Prot
Match: DHG1_BACME (Glucose 1-dehydrogenase 1 OS=Bacillus megaterium GN=gdhI PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.705e-11
Identity = 55/198 (27.78%), Postives = 92/198 (46.46%), Query Frame = 3
Query:  225 GLSTLVTGGASGIGRALSLSLARKGVFVTVVDFSE*KGKEVASLVEK*NAKFHSNLRFPSAMFIRCDVANTRDTAAAFEKHVATYGGLDICINGAGISNPIPFPKDQTDGTRSWRFTLDVNLIAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPMYNDPIYSAXKGGVVLFTKSLT-SYKRKGIRINVLCPEFVQT 815
            G   ++TG ++G+G+A+++  A +   V VV++   K +E  S++E+             A+ ++ DV    D     +  +  +G LD+ IN AG+ NP+            W   +D NL      +++AI         G +INM S     P      Y+A KGG+ L T++L   Y  KGIR+N + P  + T
Sbjct:    7 GKVVVITGSSTGLGKAMAIRFATEKAKV-VVNYRS-KEEEANSVLEEIKKVGGE------AIAVKGDVTVESDVINLVQSSIKEFGKLDVMINNAGMENPV---SSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINT 193          
BLAST of EY649913 vs. ExPASy Swiss-Prot
Match: FABG_MYCS2 (3-oxoacyl-[acyl-carrier-protein] reductase OS=Mycobacterium smegmatis GN=fabG PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.533e-11
Identity = 57/199 (28.64%), Postives = 92/199 (46.23%), Query Frame = 3
Query:  231 STLVTGGASGIGRALSLSLARKGVFVTVVDFSE*KGKEVASLVEK*NAKFHSNLRFPSAMF-IRCDVANTRDTAAAFEKHVATYGGLDICINGAGISNPIPFPKDQTDGTRSWRFTLDVNLIAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPMYNDPIYSAXKGGVVLFTKSLT-SYKRKGIRINVLCPEFVQTEM 821
            S LVTGG  GIG A++  LA  G  V V                      H     P  +F ++CDV ++     AF++     G +++ +  AGIS    F    T+    +   ++ NL     C Q+A   MQ  K+ G II +GS +G++ + N   Y+A K G++   +S++    + G+  NV+ P ++ TEM
Sbjct:   25 SVLVTGGNRGIGLAIARRLAADGHKVAVT---------------------HRGSGAPDDLFGVQCDVTDSAAVDRAFKEVEEHQGPVEVLVANAGISKD-AFLMRMTE--ERFEEVINTNLTGAFRCAQRASRTMQ-RKRFGRIIFIGSVSGMWGIGNQANYAAAKAGLIGMARSISRELAKAGVTANVVAPGYIDTEM 198          
BLAST of EY649913 vs. ExPASy Swiss-Prot
Match: DH12B_XENLA (Estradiol 17-beta-dehydrogenase 12-B OS=Xenopus laevis GN=hsd17b12-B PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.533e-11
Identity = 55/202 (27.23%), Postives = 101/202 (50.00%), Query Frame = 3
Query:  225 GLSTLVTGGASGIGRALSLSLARKGVFVTVVDFSE*KGKEVASLVEK*NAKFHSNLRFPSAMFIRCDVANTRDTAAAFEKHVATYGGLDICINGAGISNPIP-FPKDQTDGTRSWRFTLDVNLIAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPMYNDPIYSAXKGGVVLFTKSL-TSYKRKGIRINVLCPEFVQTEMA 824
            G   +VTG   GIG+A +  LAR+G+ + ++  S  K +E A  +++   KF    +  +A F +      R  A   +  +       + +N  GIS   P +  +  D   +    +++N+++V   T+  +  M    K GV++N+ S++G+YP+    +YSA K  V  F++ L   Y+ KG+ +  + P FV T++A
Sbjct:   54 GKWAVVTGATDGIGKAYAEELARRGMNIVLISRSPEKLEEAAIHIKQ---KFKVETKIIAADFGKPTEIYERIEAGLRDLEIG------VLVNNVGISYEYPEYFLEIPDLENTLDKMININIMSVCQMTRLVLPGMLGRGK-GVVLNISSASGMYPVPLLTVYSATKAFVDFFSRGLHAEYRSKGVTVQSVLPFFVATKLA 245          
BLAST of EY649913 vs. ExPASy Swiss-Prot
Match: CBR4_DANRE (Carbonyl reductase family member 4 OS=Danio rerio GN=cbr4 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.615e-11
Identity = 55/196 (28.06%), Postives = 94/196 (47.96%), Query Frame = 3
Query:  237 LVTGGASGIGRALSLSLARKGVFVTVVDFSE*KGKEVASLVEK*NAKFHSNLRFPSAMFIRCDVANTRDTAAAFEKHVATYGGLDICINGAGISNPIPFPKDQTDGTRSWRFTLDVNLIAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPMYNDPIYSAXKGGVVLFTKSLT-SYKRKGIRINVLCPEFVQTEM 821
            +V GG+ GIGRA S  LA++G  + ++     + KE A    +       +L   + + + CDV+   +   AFE    T G +   +N AGI+      + +++   S    L  NL+  +   + A+  M +    G I+N+GS  G+       +YSA K G+  FT+SL      + IR+N++ P  + T+M
Sbjct:    6 VVFGGSRGIGRAASKLLAQRGHRIVLLS----RNKEAAQSTAQ-------SLPGENHLGLSCDVSKEEEVQKAFETINKTCGTVGFLVNAAGINRDALLLRSKSEDMLS---VLHTNLLGSMLTCKAAVRNMLS--HGGAIVNIGSVVGVKGNAGQCVYSASKAGLEGFTRSLAKEVASRNIRVNLVAPGLIHTDM 185          
BLAST of EY649913 vs. ExPASy Swiss-Prot
Match: LE767_CAEEL (Putative steroid dehydrogenase let-767 OS=Caenorhabditis elegans GN=let-767 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 6.027e-11
Identity = 67/221 (30.32%), Postives = 107/221 (48.42%), Query Frame = 3
Query:  183 PFDSLPVHKMELKPGLS-TLVTGGASGIGRALSLSLARKGVFVTVVDFSE*KGKEVAS-LVEK*NAKFHSNLRFPSAMFIRCDVANTRDTAAAFEKHVATYGGLDI--CINGAGISNPIPFPKDQTDGTRSWRFTLDVNLIAVIDCTQKAIGIM--QAAKKPGVIINMGSSAGLYPMYNDPIYSAXKGGVVLFTKSL-TSYKRKGIRINVLCPEFVQTEMA 824
            P+  L    ++ + G S  +VTG   GIG+A +  LAR+G  V +V  ++ K  E    ++EK     +S++   +A F   D  N     +A++  +AT   ++I   IN  G+S   P    + DG        ++  I  +  T  + GI+    A+K GVI+N+GSSAG   M    +YSA K  V   T  L   Y+ +GI +  + P  V T+M+
Sbjct:   32 PYVLLSPIDLKKRAGASWAVVTGATDGIGKAYAFELARRGFNVLLVSRTQSKLDETKKEILEK-----YSSIEVRTAAF---DFTNA--APSAYKDLLATLNQVEIGVLINNVGMSYEYPDVLHKVDG--GIERLANITTINTLPPTLLSAGILPQMVARKAGVIVNVGSSAGANQMALWAVYSATKKYVSWLTAILRKEYEHQGITVQTIAPMMVATKMS 240          
BLAST of EY649913 vs. ExPASy Swiss-Prot
Match: HCD2_HUMAN (3-hydroxyacyl-CoA dehydrogenase type-2 OS=Homo sapiens GN=HSD17B10 PE=1 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 6.027e-11
Identity = 59/208 (28.37%), Postives = 86/208 (41.35%), Query Frame = 3
Query:  225 GLSTLVTGGASGIGRALSLSLARKGVFVTVVDFSE*KGKEVASLVEK*NAKFHSNLRFPSAMFIRCDVANTRDTAAAFEKHVATYGGLDICINGAGI---SNPIPFPKDQTDGTRSWRFTLDVNLIAVIDCTQKAIGIM-----QAAKKPGVIINMGSSAGLYPMYNDPIYSAXKGGVVLFTKSLT-SYKRKGIRINVLCPEFVQTEM 821
            GL  ++TGGASG+G A +  L  +G    ++D     G+  A        K  +N      +F   DV + +D   A       +G +D+ +N AGI   S      K QT     ++  LDVNL+   +  +   G M         + GVIIN  S A          YSA KGG+V  T  +       GIR+  + P    T +
Sbjct:   10 GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAK-------KLGNN-----CVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPL 205          
BLAST of EY649913 vs. ExPASy Swiss-Prot
Match: DHBA_BACSU (2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase OS=Bacillus subtilis GN=dhbA PE=1 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 6.027e-11
Identity = 58/205 (28.29%), Postives = 96/205 (46.83%), Query Frame = 3
Query:  225 GLSTLVTGGASGIGRALSLSLARKGVFVTVVDFSE*KGKEVASLVEK*NAKFHSNLRFPSAMFIRCDVANTRDTAAAFE---KHVATYGGLDICINGAGISNP--IPFPKDQTDGTRSWRFTLDVNLIAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPMYNDPIYSAXKGGVVLFTKSL-TSYKRKGIRINVLCPEFVQTEM 821
            G    +TG A GIG A++ +LA +G  +  VD++  K ++V S ++   A+      FP         A+ RD+AA  E   +     G +DI +N AG+  P  I    D+      W  T  VN   V + + +++      ++ G I+ +GS+A   P  +   Y++ K   V+FTK L        IR N++ P   +T+M
Sbjct:    8 GKIAFITGAAQGIGEAVARTLASQGAHIAAVDYNPEKLEKVVSSLK---AEGRHAEAFP---------ADVRDSAAIDEITARIEREMGPIDILVNVAGVLRPGLIHSLSDE-----EWEATFSVNSTGVFNAS-RSVSKYMMDRRSGSIVTVGSNAAGVPRTSMAAYASSKAAAVMFTKCLGLELAEYNIRCNIVSPGSTETDM 194          
The following BLAST results are available for this feature:
BLAST of EY649913 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 103
Match NameE-valueIdentityDescription
DHB12_MOUSE1.586e-1128.36Estradiol 17-beta-dehydrogenase 12 OS=Mus musculus... [more]
ACT3_STRCO1.586e-1132.02Putative ketoacyl reductase OS=Streptomyces coelic... [more]
FABG_CHLPN2.705e-1125.943-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]
DHG1_BACME2.705e-1127.78Glucose 1-dehydrogenase 1 OS=Bacillus megaterium G... [more]
FABG_MYCS23.533e-1128.643-oxoacyl-[acyl-carrier-protein] reductase OS=Myco... [more]
DH12B_XENLA3.533e-1127.23Estradiol 17-beta-dehydrogenase 12-B OS=Xenopus la... [more]
CBR4_DANRE4.615e-1128.06Carbonyl reductase family member 4 OS=Danio rerio ... [more]
LE767_CAEEL6.027e-1130.32Putative steroid dehydrogenase let-767 OS=Caenorha... [more]
HCD2_HUMAN6.027e-1128.373-hydroxyacyl-CoA dehydrogenase type-2 OS=Homo sap... [more]
DHBA_BACSU6.027e-1128.292,3-dihydro-2,3-dihydroxybenzoate dehydrogenase OS... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-100-004-H12-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649913 ID=EY649913; Name=EY649913; organism=Citrus sinensis; type=EST; length=937bp
CCAGTGCCGCGCAAATTGTGGTCCGGCGAGGAGAATGGGAAGCCGTCTTG
ATAACATCACCCCTTCATTTGGCAATTTATAGTAACAACAAATTTCAGTA
TGTTACAAATAAATACCCGGAAAAAGGGACAGTAAAAGCCCGCTCACATA
ATAAAACTCTTAACCGAGTAATTTAATCGCTTCCCTTTGACTCTCTGCCT
GTTCATAAAATGGAGCTCAAGCCGGGCTTATCAACTTTGGTCACCGGCGG
TGCATCTGGGATTGGTAGAGCTTTGAGTTTATCTCTTGCAAGGAAGGGAG
TCTTTGTGACAGTTGTTGATTTCTCTGAATAAAAGGGAAAGGAAGTTGCA
TCGCTTGTTGAAAAATAGAATGCCAAGTTTCATTCAAACTTAAGATTTCC
ATCTGCTATGTTTATAAGATGTGATGTGGCCAACACAAGAGATACAGCTG
CTGCTTTTGAGAAGCACGTAGCTACATATGGAGGATTGGATATATGTATC
AACGGTGCTGGGATAAGTAATCCTATTCCATTCCCAAAGGATCAAACTGA
TGGCACACGTTCATGGAGATTCACTCTTGATGTGAACTTGATTGCAGTTA
TTGATTGCACTCAGAAAGCTATTGGAATTATGCAAGCTGCAAAAAAGCCT
GGAGTGATTATAAATATGGGATCTTCTGCAGGTCTTTATCCAATGTACAA
TGATCCTATCTACTCTGCTTNCAAAGGTGGTGTTGTTTTATTTACTAAAT
CACTTACTTCCTACAAACGCAAGGGAATTCGCATCAATGTGCTGTGCCCT
GAGTTTGTTCAAACTGAGATGGCATTAAAGGTGGGCTTCAAATTATTGAT
CTGATGGGGGGCTTTTACCTATGGAAATGGAGTGAAAGGTGCTTTTGACT
TATACTGACGAGAGTAAGCTGATCTGCCTATGATACA
back to top