EY649906

Overview
NameEY649906
Unique NameEY649906
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649906 vs. ExPASy Swiss-Prot
Match: PPIA_ECHGR (Peptidyl-prolyl cis-trans isomerase OS=Echinococcus granulosus GN=CYP-1 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.208e-11
Identity = 41/100 (41.00%), Postives = 52/100 (52.00%), Query Frame = 3
Query:  192 TGENFRHFCTGKYTKGGLAVAYKGCQLHRVIKDSITHAGDFLNGDGSGCTKIYGHTRDDENSIANHTGAGL*SMVYRGPHSNGCQIFIPCAKCVRLDNKH 491
            T ENFR  CTG+   G     YKG + HR+I   +   GDF  G+G+G   IYG   +DEN    H+   + SM   G ++NG Q FI  A    LD KH
Sbjct:   30 TVENFRALCTGEKGFG-----YKGSKFHRIIPGFMCQGGDFTAGNGTGGKSIYGSKFEDENFNHKHSKPMMLSMANAGKNTNGSQFFITTAVTSWLDGKH 124          
BLAST of EY649906 vs. ExPASy Swiss-Prot
Match: CYP5_CAEEL (Peptidyl-prolyl cis-trans isomerase 5 OS=Caenorhabditis elegans GN=cyn-5 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.208e-11
Identity = 40/102 (39.22%), Postives = 52/102 (50.98%), Query Frame = 3
Query:  255 YKGCQLHRVIKDSITHAGDFLNGDGSGCTKIYGHTRDDENSIANHTGAGL*SMVYRGPHSNGCQIFIPCAKCVRLDNKHGICVRVLGDGLLACRTIXYVDSV 560
            Y G + HRVI D +   GDF  GDG+G   IYG    DEN    H GAG  SM   G  +NG Q FI   K   LD +H +  ++L +G+   R I   + +
Sbjct:   73 YPGSKFHRVIADFMIQGGDFTRGDGTGGRSIYGEKFADENFKLKHYGAGWLSMANAGADTNGSQFFITTVKTPWLDGRHVVFGKIL-EGMDVVRKIEQTEKL 173          
BLAST of EY649906 vs. ExPASy Swiss-Prot
Match: PPIL1_SCHPO (Peptidyl-prolyl cis-trans isomerase ppi1 OS=Schizosaccharomyces pombe GN=ppi1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.691e-11
Identity = 44/100 (44.00%), Postives = 54/100 (54.00%), Query Frame = 3
Query:  255 YKGCQLHRVIKDSITHAGDFLNGDGSGCTKIYGHTRDDE-NSIANHTGAGL*SMVYRGPHSNGCQIFIPCAKCVRLDNKHGICVRVLGDGLLACRTIXYV 551
            Y G   HRVI D +   GD   G G G T IYG   DDE +S  +HTGAG+ SM   GP++N  Q FI  A    LD KH I  RV+  GL  C+ +  +
Sbjct:   38 YDGVIFHRVIPDFVIQGGD-PTGTGRGGTSIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVV-SGLSVCKRMGLI 135          
BLAST of EY649906 vs. ExPASy Swiss-Prot
Match: PPIL6_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 6 OS=Homo sapiens GN=PPIL6 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.591e-11
Identity = 38/108 (35.19%), Postives = 54/108 (50.00%), Query Frame = 3
Query:  171 YPTVTLTTGENFRHFCTGK--YTKGGLAVAYKGCQLHRVIKDSITHAGDFLNGDGSGCTKIYGHTRDDENSIANHTGAGL*SMVYRGPHSNGCQIFIPCAKCVRLDNK 488
            Y  V   T +NF+  CTGK  +++ G+ + YK    HR++++     GD + G G     IYG T +DEN    H   G+  M  +G HSNG Q +I       LD K
Sbjct:  163 YCDVCPKTCKNFQVLCTGKAGFSQRGIRLHYKNSIFHRIVQNGWIQGGDIVYGKGDNGESIYGPTFEDENFSVPHNKRGVLGMANKGRHSNGSQFYITLQATPYLDRK 270          
BLAST of EY649906 vs. ExPASy Swiss-Prot
Match: CYPH_ENCCU (Peptidyl-prolyl cis-trans isomerase OS=Encephalitozoon cuniculi GN=CPR1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.591e-11
Identity = 39/100 (39.00%), Postives = 48/100 (48.00%), Query Frame = 3
Query:  192 TGENFRHFCTGKYTKGGLAVAYKGCQLHRVIKDSITHAGDFLNGDGSGCTKIYGHTRDDENSIANHTGAGL*SMVYRGPHSNGCQIFIPCAKCVRLDNKH 491
            T +NFR  C     +G     YKG   HR+I   +   GD+   +G+G   IYG    DEN    HT  G+ SM   G H+NG Q FI   K   LD KH
Sbjct:   35 TAKNFRTLCERPKGEG-----YKGSTFHRIIPGFMVQGGDYTAHNGTGGRSIYGEKFPDENFELKHTKEGILSMANCGAHTNGSQFFITLGKTQWLDEKH 129          
BLAST of EY649906 vs. ExPASy Swiss-Prot
Match: CYPD_YEAST (Peptidyl-prolyl cis-trans isomerase D OS=Saccharomyces cerevisiae GN=CPR5 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.591e-11
Identity = 52/156 (33.33%), Postives = 69/156 (44.23%), Query Frame = 3
Query:  171 YPTVTLTTGENFRHFCTGKYTKGGLAVAYKGCQLHRVIKDSITHAGDFLNGDGSGCTKIYGHTRDDENSIANHTGAGL*SMVYRGPHSNGCQIFIPCAKCVRLDNKHGICVRVLGDGLLACRTIXYVDSVHTLRTRL---ACTXPECGEMRTATLN 629
            Y   T  T ENF      +  K G    Y     HRVI + +   GDF +  G G   I+G+T  DEN    H   G  SM  RG ++NG Q FI    C  LD KH +   VL DG+     + Y+++V T    +        E GE+ T  L+
Sbjct:   55 YGLTTPQTVENFYQLTISRDPKMG----YLNSIFHRVIPNFMIQGGDFTHRSGIGGKSIFGNTFKDENFDVKHDKPGRLSMANRGKNTNGSQFFITTVPCPWLDGKHVVFGEVL-DGM---DVVHYIENVKTDSRNMPVKEVIIVESGELETVPLD 202          
The following BLAST results are available for this feature:
BLAST of EY649906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
PPIA_ECHGR1.208e-1141.00Peptidyl-prolyl cis-trans isomerase OS=Echinococcu... [more]
CYP5_CAEEL1.208e-1139.22Peptidyl-prolyl cis-trans isomerase 5 OS=Caenorhab... [more]
PPIL1_SCHPO2.691e-1144.00Peptidyl-prolyl cis-trans isomerase ppi1 OS=Schizo... [more]
PPIL6_HUMAN4.591e-1135.19Peptidyl-prolyl cis-trans isomerase-like 6 OS=Homo... [more]
CYPH_ENCCU4.591e-1139.00Peptidyl-prolyl cis-trans isomerase OS=Encephalito... [more]
CYPD_YEAST4.591e-1133.33Peptidyl-prolyl cis-trans isomerase D OS=Saccharom... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-004-H05-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649906 ID=EY649906; Name=EY649906; organism=Citrus sinensis; type=EST; length=934bp
CCACGCGTCCGATCTTGTAGAGATAATGAAGTGCTAGATACATTGCTGGC
ATCCAGAGGAAGACGAAGAGGGCAGTGGCACGTGCTGCCTCCAAACCCAA
AAAACCCATTCGTATTTTTTGATGTCACATTCACCACCATCCCCAGCTGG
TCGCATCAAGATGGAGCTCTTACCCAACAGTCACCCTAACTACCGGCGAA
AATTTTAGGCACTTCTGCACCGGCAAGTACACAAAGGGAGGATTGGCTGT
TGCTTACAAGGGATGCCAACTCCATAGGGTGATCAAGGATTCTATTACTC
ACGCTGGGGATTTTCTGAACGGTGATGGTAGTGGATGTACTAAAATATAT
GGACATACGCGGGATGATGAAAATAGTATCGCTAACCACACTGGTGCAGG
CCTATGATCTATGGTATACAGAGGACCACACTCTAATGGGTGCCAGATAT
TTATACCTTGCGCAAAATGTGTCCGGCTAGACAATAAGCACGGTATCTGT
GTGAGGGTACTCGGAGATGGACTATTAGCCTGTAGAACTATCNACTATGT
CGACTCCGTACACACACTCCGGACTAGACTGGCATGCACTATNCCAGAAT
GTGGAGAGATGAGAACTGCTACCTTGAACACATTGTAGCATTTGCTAGGA
CTGATGAAAAGCACATATCCTTTACTAGTACCATAGTCATTGACTGCGTT
AGATAGATTGAAGGACTTGCAGGCAGGGTATACTAGTGAGGGGTGCTGAT
ATTTACCATATCGGGGTGAGGGATTCACCTCNATGACAATTAATTTATGG
TGGCTTCCGGTAAAAAAAAAAAAGGGCGGCCGATTAAAGATCCAACTTAA
AACGGGGCATCAATCTTAAACTTTTAATGAACCCTAAGGATTAATGGCCG
CGTTGGAAACGGGGGCTGGAACCCCGGGTTACCA
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