EY649906

Overview
NameEY649906
Unique NameEY649906
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649906 vs. ExPASy Swiss-Prot
Match: CP18D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Arabidopsis thaliana GN=CYP18-4 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.513e-17
Identity = 58/149 (38.93%), Postives = 77/149 (51.68%), Query Frame = 3
Query:  171 YPTVTLTTGENFRHFCTGKYTKG--GLAVAYKGCQLHRVIKDSITHAGDFLNGDGSGCTKIYGHTRDDENSIANHTGAGL*SMVYRGPHSNGCQIFIPCAKCVRLDNKHGICVRVLGDGLLACRTIXYVDSVHTLRTRLACTXPECGEM 611
            +   T  T ENFR  CTG+   G  G  + +KG   HRVI   +   GDF   +G+G   IYG    DEN I  HTGAG+ SM   GP++NG Q FI   K   LD KH +  +V+  GL   + I  V S  + +T    T  +CG++
Sbjct:   25 FADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIFHRVIPGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFFICTDKTSWLDGKHVVFGQVV-KGLDVVKAIEKVGS-DSGKTSKVVTITDCGQL 171          
BLAST of EY649906 vs. ExPASy Swiss-Prot
Match: PPID_DICDI (Peptidyl-prolyl cis-trans isomerase D, mitochondrial OS=Dictyostelium discoideum GN=cypD PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.282e-17
Identity = 52/149 (34.90%), Postives = 76/149 (51.01%), Query Frame = 3
Query:  171 YPTVTLTTGENFRHFCTGK--YTKGGLAVAYKGCQLHRVIKDSITHAGDFLNGDGSGCTKIYGHTRDDENSIANHTGAGL*SMVYRGPHSNGCQIFIPCAKCVRLDNKHGICVRVLGDGLLACRTIXYVDSVHTLRTRLACTXPECGEM 611
            Y  +   T ENFR  CTG+    K G  + YKG   HRVIK+ +   GDF +G G G   IYG T +DEN +  H   G  SM   G ++NG Q FI  A+   L+  H +   V+ +G    + +   ++  + R + AC   +CG++
Sbjct:   28 YNDIVPKTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIKNFMVQGGDFTHGTGIGGESIYGRTFNDENFLVKHK-IGCLSMANAGKNTNGSQFFITTAETPHLNGGHTVFGEVV-EGFDIVKKVENAETDRSDRPKAACVIEDCGQL 174          
BLAST of EY649906 vs. ExPASy Swiss-Prot
Match: CP20B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-2, chloroplastic OS=Arabidopsis thaliana GN=CYP20-2 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.282e-17
Identity = 52/140 (37.14%), Postives = 74/140 (52.86%), Query Frame = 3
Query:  192 TGENFRHFCTGKYTKGGLAVAYKGCQLHRVIKDSITHAGDFLNGDGSGCTKIYGHTRDDENSIANHTGAGL*SMVYRGPHSNGCQIFIPCAKCVRLDNKHGICVRVLGDGLLACRTIXYVDSVHTLRTRLACTXPECGEM 611
            T ENFR  CTG+   G     YKG   HRVI+D +   GDF  G+G+G   +YG T  DEN   +H G G+ SM   GP++NG Q FI   K   LD +H +  +V+ +G+   + I   ++    R R      +CG++
Sbjct:  121 TVENFRALCTGEKGFG-----YKGSTFHRVIRDFMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRHVVFGQVI-EGMEVVKLIEEQETDRGDRPRKKVVIADCGQL 254          
BLAST of EY649906 vs. ExPASy Swiss-Prot
Match: PPIE_BOVIN (Peptidyl-prolyl cis-trans isomerase E OS=Bos taurus GN=PPIE PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.287e-17
Identity = 52/117 (44.44%), Postives = 63/117 (53.85%), Query Frame = 3
Query:  192 TGENFRHFCTGKYTKGGLAVAYKGCQLHRVIKDSITHAGDFLNGDGSGCTKIYGHTRDDENSIANHTGAGL*SMVYRGPHSNGCQIFIPCAKCVRLDNKHGICVRVLGDGLLACRTI 542
            T ENFR  CT  + KG     +KG   HR+I   +   GDF N +G+G   IYG   DDEN I  HTG GL SM   GP++NG Q F+ C K   LD KH +    + DGL   R I
Sbjct:  168 TAENFRCLCT--HEKG---FGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKH-VVFGEITDGLDVLRQI 278          
BLAST of EY649906 vs. ExPASy Swiss-Prot
Match: CYPH_BRANA (Peptidyl-prolyl cis-trans isomerase OS=Brassica napus GN=CYP PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 4.287e-17
Identity = 58/151 (38.41%), Postives = 77/151 (50.99%), Query Frame = 3
Query:  171 YPTVTLTTGENFRHFCTGK--YTKGGLAVAYKGCQLHRVIKDSITHAGDFLNGDGSGCTKIYGHTRDDENSIANHTGAGL*SMVYRGPHSNGCQIFIPCAKCVRLDNKHGICVRVLGDGLLACRTIXYV--DSVHTLRTRLACTXPECGEM 611
            Y      T ENFR  CTG+    K G  + YKG   HRVI   +   GDF  G+G+G   IYG    DEN +  HTG G+ SM   G ++NG Q FI   K   LD KH +  +V+ +G+   R I  V  DS  T +  + C   +CG++
Sbjct:   25 YADTVPETAENFRALCTGERGIGKSGKPLHYKGSAFHRVIPKFMCQGGDFTAGNGTGGESIYGMKFKDENFVKKHTGPGILSMRNAGSNTNGSQFFICTEKTSWLDGKHVVFGQVV-EGMDVVRDIEKVGSDSGRTSKKVVTC---DCGQL 171          
BLAST of EY649906 vs. ExPASy Swiss-Prot
Match: PPIB_SCHJA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma japonicum PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.599e-17
Identity = 53/140 (37.86%), Postives = 68/140 (48.57%), Query Frame = 3
Query:  192 TGENFRHFCTGKYTKGGLAVAYKGCQLHRVIKDSITHAGDFLNGDGSGCTKIYGHTRDDENSIANHTGAGL*SMVYRGPHSNGCQIFIPCAKCVRLDNKHGICVRVLGDGLLACRTIXYVDSVHTLRTRLACTXPECGEM 611
            T ENF+    G   K G   AYKG   HRVIK  +   GDF N DG+G   IYG    DEN    H GAG  SM   GP++NG Q FI   +   LD KH +  +V+ +G+   R I  + +    R   +     CG +
Sbjct:   60 TVENFKQLSIGTTLKDGRTAAYKGSTFHRVIKSFMIQGGDFTNHDGTGGFSIYGERFPDENFKLKHVGAGWLSMANAGPNTNGAQFFITTTQNPWLDGKHVVFGKVV-EGMSVVRQIENMQTDSRDRPVKSVKIANCGHI 198          
BLAST of EY649906 vs. ExPASy Swiss-Prot
Match: CYP8_CAEEL (Peptidyl-prolyl cis-trans isomerase 8 OS=Caenorhabditis elegans GN=cyn-8 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.599e-17
Identity = 54/141 (38.30%), Postives = 72/141 (51.06%), Query Frame = 3
Query:  192 TGENFRHFCTGKYTK-GGLAVAYKGCQLHRVIKDSITHAGDFLNGDGSGCTKIYGHTRDDENSIANHTGAGL*SMVYRGPHSNGCQIFIPCAKCVRLDNKHGICVRVLGDGLLACRTIXYVDSVHTLRTRLACTXPECGEM 611
            T ENFR FCTG+  K  G   +Y+G   HRVIK  +   GD  +G+G+G   IYG T DDEN    H    L SM  RGP +NG Q FI   +   LD KH +   V+  G+   + I  +++ +  +         CGEM
Sbjct:   37 TVENFRAFCTGELGKMNGHYASYQGSVFHRVIKGFMIQGGDITHGNGTGGYSIYGRTFDDENLALKHKKPYLLSMANRGPDTNGSQFFITSEEVPHLDGKHCVFGEVI-KGVEVVKAIENLETGNEDKPVCKVEITHCGEM 176          
BLAST of EY649906 vs. ExPASy Swiss-Prot
Match: CYP3_CAEEL (Peptidyl-prolyl cis-trans isomerase 3 OS=Caenorhabditis elegans GN=cyn-3 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.312e-17
Identity = 53/150 (35.33%), Postives = 77/150 (51.33%), Query Frame = 3
Query:  171 YPTVTLTTGENFRHFCTGK--YTKGGLAVAYKGCQLHRVIKDSITHAGDFLNGDGSGCTKIYGHTRDDENSIANHTGAGL*SMVYRGPHSNGCQIFIPCAKCVRLDNKHGICVRVLGDGLLACRTIXYVDSVHTLRTRLACTXPECGEMR 614
            Y  V   T  NFR  CTG+    K G  + +KG + HR+I + +   GDF  G+G+G   IYG    DEN    HTG G+ SM   GP++NG Q F+   K   LD KH +  RV+ +GL   + +    S  + +    C   +CG+++
Sbjct:   25 YDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVV-EGLDVVKAVESNGS-QSGKPVKDCMIADCGQLK 172          
BLAST of EY649906 vs. ExPASy Swiss-Prot
Match: CP18C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Arabidopsis thaliana GN=CYP18-3 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.312e-17
Identity = 56/149 (37.58%), Postives = 77/149 (51.68%), Query Frame = 3
Query:  171 YPTVTLTTGENFRHFCTGKYTKGGLA--VAYKGCQLHRVIKDSITHAGDFLNGDGSGCTKIYGHTRDDENSIANHTGAGL*SMVYRGPHSNGCQIFIPCAKCVRLDNKHGICVRVLGDGLLACRTIXYVDSVHTLRTRLACTXPECGEM 611
            Y   T  T ENFR  CTG+   GG    + +KG + HRVI + +   GDF  G+G+G   IYG   +DEN    HTG G+ SM   G ++NG Q FI   K   LD KH +  +V+ +GL   + I  V S     T+      +CG++
Sbjct:   25 YTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVV-EGLDVVKAIEKVGSSSGKPTK-PVVVADCGQL 171          
BLAST of EY649906 vs. ExPASy Swiss-Prot
Match: PPIE_PONAB (Peptidyl-prolyl cis-trans isomerase E OS=Pongo abelii GN=PPIE PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.550e-17
Identity = 52/117 (44.44%), Postives = 63/117 (53.85%), Query Frame = 3
Query:  192 TGENFRHFCTGKYTKGGLAVAYKGCQLHRVIKDSITHAGDFLNGDGSGCTKIYGHTRDDENSIANHTGAGL*SMVYRGPHSNGCQIFIPCAKCVRLDNKHGICVRVLGDGLLACRTI 542
            T ENFR  CT  + KG     +KG   HR+I   +   GDF N +G+G   IYG   DDEN I  HTG GL SM   GP++NG Q F+ C K   LD KH +   V  +GL   R I
Sbjct:  168 TAENFRCLCT--HEKG---FGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVT-EGLDVLRQI 278          
The following BLAST results are available for this feature:
BLAST of EY649906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
CP18D_ARATH2.513e-1738.93Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Ara... [more]
PPID_DICDI3.282e-1734.90Peptidyl-prolyl cis-trans isomerase D, mitochondri... [more]
CP20B_ARATH3.282e-1737.14Peptidyl-prolyl cis-trans isomerase CYP20-2, chlor... [more]
PPIE_BOVIN4.287e-1744.44Peptidyl-prolyl cis-trans isomerase E OS=Bos tauru... [more]
CYPH_BRANA4.287e-1738.41Peptidyl-prolyl cis-trans isomerase OS=Brassica na... [more]
PPIB_SCHJA5.599e-1737.86Peptidyl-prolyl cis-trans isomerase B OS=Schistoso... [more]
CYP8_CAEEL5.599e-1738.30Peptidyl-prolyl cis-trans isomerase 8 OS=Caenorhab... [more]
CYP3_CAEEL7.312e-1735.33Peptidyl-prolyl cis-trans isomerase 3 OS=Caenorhab... [more]
CP18C_ARATH7.312e-1737.58Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Ara... [more]
PPIE_PONAB9.550e-1744.44Peptidyl-prolyl cis-trans isomerase E OS=Pongo abe... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-004-H05-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649906 ID=EY649906; Name=EY649906; organism=Citrus sinensis; type=EST; length=934bp
CCACGCGTCCGATCTTGTAGAGATAATGAAGTGCTAGATACATTGCTGGC
ATCCAGAGGAAGACGAAGAGGGCAGTGGCACGTGCTGCCTCCAAACCCAA
AAAACCCATTCGTATTTTTTGATGTCACATTCACCACCATCCCCAGCTGG
TCGCATCAAGATGGAGCTCTTACCCAACAGTCACCCTAACTACCGGCGAA
AATTTTAGGCACTTCTGCACCGGCAAGTACACAAAGGGAGGATTGGCTGT
TGCTTACAAGGGATGCCAACTCCATAGGGTGATCAAGGATTCTATTACTC
ACGCTGGGGATTTTCTGAACGGTGATGGTAGTGGATGTACTAAAATATAT
GGACATACGCGGGATGATGAAAATAGTATCGCTAACCACACTGGTGCAGG
CCTATGATCTATGGTATACAGAGGACCACACTCTAATGGGTGCCAGATAT
TTATACCTTGCGCAAAATGTGTCCGGCTAGACAATAAGCACGGTATCTGT
GTGAGGGTACTCGGAGATGGACTATTAGCCTGTAGAACTATCNACTATGT
CGACTCCGTACACACACTCCGGACTAGACTGGCATGCACTATNCCAGAAT
GTGGAGAGATGAGAACTGCTACCTTGAACACATTGTAGCATTTGCTAGGA
CTGATGAAAAGCACATATCCTTTACTAGTACCATAGTCATTGACTGCGTT
AGATAGATTGAAGGACTTGCAGGCAGGGTATACTAGTGAGGGGTGCTGAT
ATTTACCATATCGGGGTGAGGGATTCACCTCNATGACAATTAATTTATGG
TGGCTTCCGGTAAAAAAAAAAAAGGGCGGCCGATTAAAGATCCAACTTAA
AACGGGGCATCAATCTTAAACTTTTAATGAACCCTAAGGATTAATGGCCG
CGTTGGAAACGGGGGCTGGAACCCCGGGTTACCA
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