EY649906

Overview
NameEY649906
Unique NameEY649906
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649906 vs. ExPASy Swiss-Prot
Match: PPIE_MOUSE (Peptidyl-prolyl cis-trans isomerase E OS=Mus musculus GN=Ppie PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 9.550e-17
Identity = 52/117 (44.44%), Postives = 63/117 (53.85%), Query Frame = 3
Query:  192 TGENFRHFCTGKYTKGGLAVAYKGCQLHRVIKDSITHAGDFLNGDGSGCTKIYGHTRDDENSIANHTGAGL*SMVYRGPHSNGCQIFIPCAKCVRLDNKHGICVRVLGDGLLACRTI 542
            T ENFR  CT  + KG     +KG   HR+I   +   GDF N +G+G   IYG   DDEN I  HTG GL SM   GP++NG Q F+ C K   LD KH +   V  +GL   R I
Sbjct:  168 TAENFRCLCT--HEKG---FGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVT-EGLDVLRQI 278          
BLAST of EY649906 vs. ExPASy Swiss-Prot
Match: PPIE_HUMAN (Peptidyl-prolyl cis-trans isomerase E OS=Homo sapiens GN=PPIE PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.550e-17
Identity = 52/117 (44.44%), Postives = 63/117 (53.85%), Query Frame = 3
Query:  192 TGENFRHFCTGKYTKGGLAVAYKGCQLHRVIKDSITHAGDFLNGDGSGCTKIYGHTRDDENSIANHTGAGL*SMVYRGPHSNGCQIFIPCAKCVRLDNKHGICVRVLGDGLLACRTI 542
            T ENFR  CT  + KG     +KG   HR+I   +   GDF N +G+G   IYG   DDEN I  HTG GL SM   GP++NG Q F+ C K   LD KH +   V  +GL   R I
Sbjct:  168 TAENFRCLCT--HEKG---FGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVT-EGLDVLRQI 278          
BLAST of EY649906 vs. ExPASy Swiss-Prot
Match: CYP40_ARATH (Peptidyl-prolyl cis-trans isomerase CYP40 OS=Arabidopsis thaliana GN=CYP40 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.550e-17
Identity = 56/150 (37.33%), Postives = 72/150 (48.00%), Query Frame = 3
Query:  171 YPTVTLTTGENFRHFCTGKYTKG---GLAVAYKGCQLHRVIKDSITHAGDFLNGDGSGCTKIYGHTRDDENSIANHTGAGL*SMVYRGPHSNGCQIFIPCAKCVRLDNKHGICVRVLGDGLLACRTIXYVDSVHTLRTRLACTXPECGEM 611
            Y  V   T ENFR  CTG+   G   G+ + YKG + HRVIK  +   GD    DG+G   IYG   DDEN    H   G+ SM   GP++NG Q FI   +   LD KH +  RV   G+   R+I +V               +CGE+
Sbjct:   25 YDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNRFHRVIKGFMIQGGDISANDGTGGESIYGLKFDDENFELKHERKGMLSMANSGPNTNGSQFFITTTRTSHLDGKHVVFGRVT-KGMGVVRSIEHVSIEEQSCPSQDVVIHDCGEI 173          
BLAST of EY649906 vs. ExPASy Swiss-Prot
Match: CP19B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Arabidopsis thaliana GN=CYP19-2 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.550e-17
Identity = 56/149 (37.58%), Postives = 76/149 (51.01%), Query Frame = 3
Query:  171 YPTVTLTTGENFRHFCTGKYTKG--GLAVAYKGCQLHRVIKDSITHAGDFLNGDGSGCTKIYGHTRDDENSIANHTGAGL*SMVYRGPHSNGCQIFIPCAKCVRLDNKHGICVRVLGDGLLACRTIXYVDSVHTLRTRLACTXPECGEM 611
            Y   T  T ENFR  CTG+   G  G  + +KG   HRVI + +   GDF  G+G+G   IYG   +DEN    HTG G+ SM   G ++NG Q FI   K   LD KH +  +V+ +GL   + I  + S     T+      +CGE+
Sbjct:   26 YTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVV-EGLDVVKAIEKIGSSSGKPTK-PVVIADCGEI 172          
BLAST of EY649906 vs. ExPASy Swiss-Prot
Match: PPIB_CRYNE (Peptidyl-prolyl cis-trans isomerase B OS=Cryptococcus neoformans GN=CPR2 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.247e-16
Identity = 48/108 (44.44%), Postives = 58/108 (53.70%), Query Frame = 3
Query:  192 TGENFRHFCTGKYTKG-GLAVAYKGCQLHRVIKDSITHAGDFLNGDGSGCTKIYGHTRDDENSIANHTGAGL*SMVYRGPHSNGCQIFIPCAKCVRLDNKHGICVRVL 512
            T ENFR   TGK + G  L   Y+G   HR+IK+ +   GDF  GDG+G   IYG    DEN    HTG G+ SM   G  +NG Q FI   K   LDN+H +   VL
Sbjct:   73 TAENFRALATGKNSDGEDLGYGYEGSSFHRIIKNFMIQGGDFTKGDGTGGKSIYGSKFPDENFKLKHTGPGVLSMANAGRDTNGSQFFICTVKTAWLDNRHVVFGHVL 180          
BLAST of EY649906 vs. ExPASy Swiss-Prot
Match: CYP5_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp5 OS=Rhizopus oryzae GN=cyp5 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.247e-16
Identity = 46/104 (44.23%), Postives = 56/104 (53.85%), Query Frame = 3
Query:  192 TGENFRHFCTGKYTKG--GLAVAYKGCQLHRVIKDSITHAGDFLNGDGSGCTKIYGHTRDDENSIANHTGAGL*SMVYRGPHSNGCQIFIPCAKCVRLDNKHGI 497
            T ENFR  CTG+   G  G  + YKG   HR+I   +   GDF  G+G G   IYGH  +DEN    HTG G+ SM   GP++NG Q FI   K   LD  H +
Sbjct:   35 TAENFRALCTGEKGTGVSGKPLHYKGSHFHRIIPGFMAQGGDFTMGNGRGGESIYGHKFNDENFTLKHTGKGVLSMANAGPNTNGSQFFITFDKTPWLDGNHTV 138          
BLAST of EY649906 vs. ExPASy Swiss-Prot
Match: PPIB_SCHMA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma mansoni GN=CYP PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.629e-16
Identity = 50/117 (42.74%), Postives = 60/117 (51.28%), Query Frame = 3
Query:  192 TGENFRHFCTGKYTKGGLAVAYKGCQLHRVIKDSITHAGDFLNGDGSGCTKIYGHTRDDENSIANHTGAGL*SMVYRGPHSNGCQIFIPCAKCVRLDNKHGICVRVLGDGLLACRTI 542
            T ENF+    G   K G   +YKG   HRVIK  +   GDF N DG+G   IYG    DEN    H GAG  SM   GP +NG Q FI   K   LD KH +  +V+ +G+   R I
Sbjct:   60 TVENFKQLSIGTQLKDGRTASYKGSTFHRVIKSFMIQGGDFTNHDGTGGFSIYGDRFPDENFKLRHVGAGWLSMANAGPDTNGSQFFITTVKTSWLDGKHVVFGKVV-EGMNIVRQI 175          
BLAST of EY649906 vs. ExPASy Swiss-Prot
Match: CYPH_SOLLC (Peptidyl-prolyl cis-trans isomerase OS=Solanum lycopersicum GN=CYP PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.629e-16
Identity = 49/116 (42.24%), Postives = 63/116 (54.31%), Query Frame = 3
Query:  171 YPTVTLTTGENFRHFCTGKYTKG--GLAVAYKGCQLHRVIKDSITHAGDFLNGDGSGCTKIYGHTRDDENSIANHTGAGL*SMVYRGPHSNGCQIFIPCAKCVRLDNKHGICVRVL 512
            +   T  T ENFR  CTG+   G  G  + YKG   HRVI   +   GDF  G+G+G   IYG   +DEN +  HTG G+ SM   GP +NG Q FI  AK   L+ KH +  +V+
Sbjct:   25 FADTTPKTAENFRALCTGEKGVGKMGKPLHYKGSTFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFNDENFVKKHTGPGILSMANAGPGTNGSQFFICTAKTEWLNGKHVVFGQVV 140          
BLAST of EY649906 vs. ExPASy Swiss-Prot
Match: PPIA_DICDI (Peptidyl-prolyl cis-trans isomerase A OS=Dictyostelium discoideum GN=ppiA PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.757e-16
Identity = 46/109 (42.20%), Postives = 56/109 (51.38%), Query Frame = 3
Query:  171 YPTVTLTTGENFRHFCTGK--YTKGGLAVAYKGCQLHRVIKDSITHAGDFLNGDGSGCTKIYGHTRDDENSIANHTGAGL*SMVYRGPHSNGCQIFIPCAKCVRLDNKH 491
            Y      T ENFR  CTG+    K G  ++YKG   HRVI + +   GDF  G+G+G   IYG+   DEN    H G G  SM   G ++NG Q FI  A    LD KH
Sbjct:   33 YANTVPKTAENFRALCTGEKGIGKSGKPLSYKGSSFHRVITNFMCQGGDFTMGNGTGGESIYGNKFADENFKLKHFGQGTLSMANAGANTNGSQFFICVAPTDWLDGKH 141          

HSP 2 Score: 26.5646 bits (57), Expect = 1.757e-16
Identity = 10/16 (62.50%), Postives = 13/16 (81.25%), Query Frame = 1
Query:   82 VLPPNPKNPFVFFDVT 129
            V P +P+NP VFFD+T
Sbjct:    4 VKPTSPENPRVFFDIT 19          
BLAST of EY649906 vs. ExPASy Swiss-Prot
Match: PPIH_SCHPO (Peptidyl-prolyl cis-trans isomerase cyp3 OS=Schizosaccharomyces pombe GN=cyp3 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.629e-16
Identity = 55/150 (36.67%), Postives = 72/150 (48.00%), Query Frame = 3
Query:  171 YPTVTLTTGENFRHFCTGKYTKG--GLAVAYKGCQLHRVIKDSITHAGDFLNGDGSGCTKIYG-HTRDDENSIANHTGAGL*SMVYRGPHSNGCQIFIPCAKCVRLDNKHGICVRVLGDGLLACRTIXYVDSVHTLRTRLACTXPECGEM 611
            + ++   T ENFR FCTG+ T G     + YK    HR+I+  +   GDF++GDG+G   I+   T  DEN    H   GL SM   G  SNGCQ FI    C  LD KH +   V+ +G    + I         R +      ECGEM
Sbjct:   26 FSSIVPKTAENFRQFCTGE-TLGVNQKPIGYKNSTFHRIIQGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITTVPCDFLDGKHVVFGEVI-EGYDIVKEIESTPVGANSRPKSNVAIVECGEM 173          
The following BLAST results are available for this feature:
BLAST of EY649906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
PPIE_MOUSE9.550e-1744.44Peptidyl-prolyl cis-trans isomerase E OS=Mus muscu... [more]
PPIE_HUMAN9.550e-1744.44Peptidyl-prolyl cis-trans isomerase E OS=Homo sapi... [more]
CYP40_ARATH9.550e-1737.33Peptidyl-prolyl cis-trans isomerase CYP40 OS=Arabi... [more]
CP19B_ARATH9.550e-1737.58Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Ara... [more]
PPIB_CRYNE1.247e-1644.44Peptidyl-prolyl cis-trans isomerase B OS=Cryptococ... [more]
CYP5_RHIOR1.247e-1644.23Peptidyl-prolyl cis-trans isomerase cyp5 OS=Rhizop... [more]
PPIB_SCHMA1.629e-1642.74Peptidyl-prolyl cis-trans isomerase B OS=Schistoso... [more]
CYPH_SOLLC1.629e-1642.24Peptidyl-prolyl cis-trans isomerase OS=Solanum lyc... [more]
PPIA_DICDI1.757e-1642.20Peptidyl-prolyl cis-trans isomerase A OS=Dictyoste... [more]
PPIH_SCHPO3.629e-1636.67Peptidyl-prolyl cis-trans isomerase cyp3 OS=Schizo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-004-H05-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649906 ID=EY649906; Name=EY649906; organism=Citrus sinensis; type=EST; length=934bp
CCACGCGTCCGATCTTGTAGAGATAATGAAGTGCTAGATACATTGCTGGC
ATCCAGAGGAAGACGAAGAGGGCAGTGGCACGTGCTGCCTCCAAACCCAA
AAAACCCATTCGTATTTTTTGATGTCACATTCACCACCATCCCCAGCTGG
TCGCATCAAGATGGAGCTCTTACCCAACAGTCACCCTAACTACCGGCGAA
AATTTTAGGCACTTCTGCACCGGCAAGTACACAAAGGGAGGATTGGCTGT
TGCTTACAAGGGATGCCAACTCCATAGGGTGATCAAGGATTCTATTACTC
ACGCTGGGGATTTTCTGAACGGTGATGGTAGTGGATGTACTAAAATATAT
GGACATACGCGGGATGATGAAAATAGTATCGCTAACCACACTGGTGCAGG
CCTATGATCTATGGTATACAGAGGACCACACTCTAATGGGTGCCAGATAT
TTATACCTTGCGCAAAATGTGTCCGGCTAGACAATAAGCACGGTATCTGT
GTGAGGGTACTCGGAGATGGACTATTAGCCTGTAGAACTATCNACTATGT
CGACTCCGTACACACACTCCGGACTAGACTGGCATGCACTATNCCAGAAT
GTGGAGAGATGAGAACTGCTACCTTGAACACATTGTAGCATTTGCTAGGA
CTGATGAAAAGCACATATCCTTTACTAGTACCATAGTCATTGACTGCGTT
AGATAGATTGAAGGACTTGCAGGCAGGGTATACTAGTGAGGGGTGCTGAT
ATTTACCATATCGGGGTGAGGGATTCACCTCNATGACAATTAATTTATGG
TGGCTTCCGGTAAAAAAAAAAAAGGGCGGCCGATTAAAGATCCAACTTAA
AACGGGGCATCAATCTTAAACTTTTAATGAACCCTAAGGATTAATGGCCG
CGTTGGAAACGGGGGCTGGAACCCCGGGTTACCA
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