EY649906

Overview
NameEY649906
Unique NameEY649906
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649906 vs. ExPASy Swiss-Prot
Match: PPIB_ORPSP (Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyces sp. (strain PC-2) GN=CYPB PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.801e-15
Identity = 54/153 (35.29%), Postives = 71/153 (46.41%), Query Frame = 3
Query:  171 YPTVTLTTGENFRHFCTGKYTKGGLAVAYKGCQLHRVIKDSITHAGDFLNGDGSGCTKIYGHTRDDENSIANHTGAGL*SMVYRGPHSNGCQIFIPCAKCVRLDNKHGICVRVLGDGLLACRTIXYVDSVHTLRTRLACTXPECGEMRTATLN 629
            Y  V   T ENFR   TG+   G     YK  + HRVIKD +   GDF  GDG+G   IYG    DEN    HTG G+ SM   G  +NG Q FI       LD +H +  +V+ +G+     I    ++   R        +CGE+  +  N
Sbjct:   51 YGEVVPKTVENFRALATGEKGYG-----YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFADENFKLRHTGPGILSMANAGRDTNGSQFFITTVTTSWLDGRHVVFGKVI-EGMDVVTAIETTKTLPGDRPATPVIIADCGELPVSNNN 197          
BLAST of EY649906 vs. ExPASy Swiss-Prot
Match: PPIA_RABIT (Peptidyl-prolyl cis-trans isomerase A OS=Oryctolagus cuniculus GN=PPIA PE=2 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 1.801e-15
Identity = 52/140 (37.14%), Postives = 71/140 (50.71%), Query Frame = 3
Query:  192 TGENFRHFCTGKYTKGGLAVAYKGCQLHRVIKDSITHAGDFLNGDGSGCTKIYGHTRDDENSIANHTGAGL*SMVYRGPHSNGCQIFIPCAKCVRLDNKHGICVRVLGDGLLACRTIXYVDSVHTLRTRLACTXPECGEM 611
            T ENFR   TG+   G     YKG   HR+I   +   GDF   +G+G   IYG   +DEN +  HTG G+ SM   GP++NG Q FI  AK   LD KH +  RV  +G+     + +  S +  +T    T   CG++
Sbjct:   32 TAENFRALSTGEKGFG-----YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFLLKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGRV-KEGMSIVEAMEHFGSENG-KTSKKITIANCGQL 164          
BLAST of EY649906 vs. ExPASy Swiss-Prot
Match: PPIA_CANAL (Peptidyl-prolyl cis-trans isomerase OS=Candida albicans GN=CYP1 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.801e-15
Identity = 51/118 (43.22%), Postives = 59/118 (50.00%), Query Frame = 3
Query:  171 YPTVTLTTGENFRHFCTGKYTKGGLAVAYKGCQLHRVIKDSITHAGDFLNGDGSGCTKIYGHTRDDENSIANHTGAGL*SMVYRGPHSNGCQIFIPCAKCVRLDNKHGICVRVLGDGL 524
            Y  V   T ENFR  CTG+   G     YKG   HRVI   +   GDF N +G+G   IYG    DEN +  H   GL SM   GP++NG Q FI    C  LD KH +   V  DGL
Sbjct:   23 YDDVVPKTAENFRALCTGEKGFG-----YKGSIFHRVIPQFMLQGGDFTNFNGTGGKSIYGTKFADENFVKRHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVT-DGL 134          
BLAST of EY649906 vs. ExPASy Swiss-Prot
Match: PPIC_HUMAN (Peptidyl-prolyl cis-trans isomerase C OS=Homo sapiens GN=PPIC PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.352e-15
Identity = 50/117 (42.74%), Postives = 60/117 (51.28%), Query Frame = 3
Query:  192 TGENFRHFCTGKYTKGGLAVAYKGCQLHRVIKDSITHAGDFLNGDGSGCTKIYGHTRDDENSIANHTGAGL*SMVYRGPHSNGCQIFIPCAKCVRLDNKHGICVRVLGDGLLACRTI 542
            T ENF    TG+   G     YKG + HRVIKD +   GD   GDG+G   IYG T  DEN    H G G  SM   GP +NG Q FI   K   LD KH +  +V+ DG+    +I
Sbjct:   66 TVENFVALATGEKGYG-----YKGSKFHRVIKDFMIQGGDITTGDGTGGVSIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVI-DGMTVVHSI 176          
BLAST of EY649906 vs. ExPASy Swiss-Prot
Match: PPIB_ARTBE (Peptidyl-prolyl cis-trans isomerase B OS=Arthroderma benhamiae GN=CPR2 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.352e-15
Identity = 48/107 (44.86%), Postives = 57/107 (53.27%), Query Frame = 3
Query:  192 TGENFRHFCTGKYTKGGLAVAYKGCQLHRVIKDSITHAGDFLNGDGSGCTKIYGHTRDDENSIANHTGAGL*SMVYRGPHSNGCQIFIPCAKCVRLDNKHGICVRVL 512
            T ENFR   TG+   G     Y+G   HRVIKD +   GDF NGDG+G   IYG+  +DEN    HT  G+ SM   G  +NG Q FI  A    LD KH +   VL
Sbjct:   63 TAENFRALATGEKGFG-----YEGSTFHRVIKDFMIQGGDFTNGDGTGGKSIYGNKFEDENFKLRHTKKGVLSMANAGKDTNGSQFFITTAITAWLDGKHVVFGEVL 164          
BLAST of EY649906 vs. ExPASy Swiss-Prot
Match: PPIA_RAT (Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus GN=Ppia PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 2.352e-15
Identity = 52/140 (37.14%), Postives = 70/140 (50.00%), Query Frame = 3
Query:  192 TGENFRHFCTGKYTKGGLAVAYKGCQLHRVIKDSITHAGDFLNGDGSGCTKIYGHTRDDENSIANHTGAGL*SMVYRGPHSNGCQIFIPCAKCVRLDNKHGICVRVLGDGLLACRTIXYVDSVHTLRTRLACTXPECGEM 611
            T ENFR   TG+   G     YKG   HR+I   +   GDF   +G+G   IYG   +DEN I  HTG G+ SM   GP++NG Q FI  AK   LD KH +  +V  +G+     +    S    +T    T  +CG++
Sbjct:   32 TAENFRALSTGEKGFG-----YKGSSFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKV-KEGMSIVEAMERFGS-RNGKTSKKITISDCGQL 164          
BLAST of EY649906 vs. ExPASy Swiss-Prot
Match: PAL4A_HUMAN (Peptidylprolyl cis-trans isomerase A-like 4A OS=Homo sapiens GN=PPIAL4A PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.352e-15
Identity = 47/100 (47.00%), Postives = 57/100 (57.00%), Query Frame = 3
Query:  192 TGENFRHFCTGKYTKGGLAVAYKGCQLHRVIKDSITHAGDFLNGDGSGCTKIYGHTRDDENSIANHTGAGL*SMVYRGPHSNGCQIFIPCAKCVRLDNKH 491
            T ENFR   TG+  KG     YKG   HR+I   +   GDF + +G+G   IYG   DDEN I  HTG+G+ SM   GP++NG Q FI  AK   LD KH
Sbjct:   32 TAENFRALSTGE--KG---FRYKGSCFHRIIPGFMCQGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTEWLDGKH 126          
BLAST of EY649906 vs. ExPASy Swiss-Prot
Match: CYPX_USEUD (Peptidyl-prolyl cis-trans isomerase OS=Unspecified eudicot DB-1992 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 2.427e-15
Identity = 52/142 (36.62%), Postives = 68/142 (47.89%), Query Frame = 3
Query:  192 TGENFRHFCTGKYTKG--GLAVAYKGCQLHRVIKDSITHAGDFLNGDGSGCTKIYGHTRDDENSIANHTGAGL*SMVYRGPHSNGCQIFIPCAKCVRLDNKHGICVRVLGDGLLACRTIXYVDSVHTLRTRLACTXPECGEM 611
            T ENFR  CTG+   G  G  + Y+G   HRVI   +   GDF  G+G G   IYG    DEN I  HT  GL SM   GP +NG Q FI       LD KH +  +V+ +G+   R I    +    +        +CG++
Sbjct:   29 TAENFRALCTGEKGIGPSGKKMTYEGSVFHRVIPKFMLQGGDFTLGNGRGGESIYGAKFADENFIHKHTTPGLLSMANAGPGTNGSQFFITTVATPHLDGKHVVFGKVV-EGMDVVRKIEATQTDRGDKPLSEVKIAKCGQL 169          

HSP 2 Score: 22.3274 bits (46), Expect = 2.427e-15
Identity = 12/24 (50.00%), Postives = 15/24 (62.50%), Query Frame = 2
Query:  107 HSYFLMSHSPPSPAGRIKMELLPN 178
            H +F M+     PAGRI MEL P+
Sbjct:    3 HCFFDMTIGG-QPAGRIIMELFPD 25          
BLAST of EY649906 vs. ExPASy Swiss-Prot
Match: PPIF_HUMAN (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Homo sapiens GN=PPIF PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.072e-15
Identity = 54/140 (38.57%), Postives = 69/140 (49.29%), Query Frame = 3
Query:  192 TGENFRHFCTGKYTKGGLAVAYKGCQLHRVIKDSITHAGDFLNGDGSGCTKIYGHTRDDENSIANHTGAGL*SMVYRGPHSNGCQIFIPCAKCVRLDNKHGICVRVLGDGLLACRTIXYVDSVHTLRTRLACTXPECGEM 611
            T ENFR  CTG+   G     YKG   HRVI   +  AGDF N +G+G   IYG    DEN    H G G+ SM   GP++NG Q FI   K   LD KH +   V  +G+   + I    S  + RT       +CG++
Sbjct:   74 TAENFRALCTGEKGFG-----YKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHV-KEGMDVVKKIESFGS-KSGRTSKKIVITDCGQL 206          
BLAST of EY649906 vs. ExPASy Swiss-Prot
Match: PPID_SCHPO (40 kDa peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe GN=wis2 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.072e-15
Identity = 48/129 (37.21%), Postives = 66/129 (51.16%), Query Frame = 3
Query:  171 YPTVTLTTGENFRHFCTGKYTKGGLAVAYKGCQLHRVIKDSITHAGDFLNGDGSGCTKIYGHTRDDENSIANHTGAGL*SMVYRGPHSNGCQIFIPCAKCVRLDNKHGICVRVLGDGLLACRTIXYVDS 557
            +  V   T +NF   C G + K G  + YKG + HRVIK+ +   GDF  G+G+G   IYG   +DEN    H    L SM   GP++NG Q FI       LD KH +  +V+  G    RTI  +++
Sbjct:   24 FDNVVPKTVKNFASLCNG-FEKDGRCLTYKGSRFHRVIKNFMLQGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGKVI-QGKSTVRTIENLET 150          
The following BLAST results are available for this feature:
BLAST of EY649906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
PPIB_ORPSP1.801e-1535.29Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyc... [more]
PPIA_RABIT1.801e-1537.14Peptidyl-prolyl cis-trans isomerase A OS=Oryctolag... [more]
PPIA_CANAL1.801e-1543.22Peptidyl-prolyl cis-trans isomerase OS=Candida alb... [more]
PPIC_HUMAN2.352e-1542.74Peptidyl-prolyl cis-trans isomerase C OS=Homo sapi... [more]
PPIB_ARTBE2.352e-1544.86Peptidyl-prolyl cis-trans isomerase B OS=Arthroder... [more]
PPIA_RAT2.352e-1537.14Peptidyl-prolyl cis-trans isomerase A OS=Rattus no... [more]
PAL4A_HUMAN2.352e-1547.00Peptidylprolyl cis-trans isomerase A-like 4A OS=Ho... [more]
CYPX_USEUD2.427e-1536.62Peptidyl-prolyl cis-trans isomerase OS=Unspecified... [more]
PPIF_HUMAN3.072e-1538.57Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPID_SCHPO3.072e-1537.2140 kDa peptidyl-prolyl cis-trans isomerase OS=Schi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-004-H05-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649906 ID=EY649906; Name=EY649906; organism=Citrus sinensis; type=EST; length=934bp
CCACGCGTCCGATCTTGTAGAGATAATGAAGTGCTAGATACATTGCTGGC
ATCCAGAGGAAGACGAAGAGGGCAGTGGCACGTGCTGCCTCCAAACCCAA
AAAACCCATTCGTATTTTTTGATGTCACATTCACCACCATCCCCAGCTGG
TCGCATCAAGATGGAGCTCTTACCCAACAGTCACCCTAACTACCGGCGAA
AATTTTAGGCACTTCTGCACCGGCAAGTACACAAAGGGAGGATTGGCTGT
TGCTTACAAGGGATGCCAACTCCATAGGGTGATCAAGGATTCTATTACTC
ACGCTGGGGATTTTCTGAACGGTGATGGTAGTGGATGTACTAAAATATAT
GGACATACGCGGGATGATGAAAATAGTATCGCTAACCACACTGGTGCAGG
CCTATGATCTATGGTATACAGAGGACCACACTCTAATGGGTGCCAGATAT
TTATACCTTGCGCAAAATGTGTCCGGCTAGACAATAAGCACGGTATCTGT
GTGAGGGTACTCGGAGATGGACTATTAGCCTGTAGAACTATCNACTATGT
CGACTCCGTACACACACTCCGGACTAGACTGGCATGCACTATNCCAGAAT
GTGGAGAGATGAGAACTGCTACCTTGAACACATTGTAGCATTTGCTAGGA
CTGATGAAAAGCACATATCCTTTACTAGTACCATAGTCATTGACTGCGTT
AGATAGATTGAAGGACTTGCAGGCAGGGTATACTAGTGAGGGGTGCTGAT
ATTTACCATATCGGGGTGAGGGATTCACCTCNATGACAATTAATTTATGG
TGGCTTCCGGTAAAAAAAAAAAAGGGCGGCCGATTAAAGATCCAACTTAA
AACGGGGCATCAATCTTAAACTTTTAATGAACCCTAAGGATTAATGGCCG
CGTTGGAAACGGGGGCTGGAACCCCGGGTTACCA
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