EY649899

Overview
NameEY649899
Unique NameEY649899
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length393
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649899 vs. ExPASy Swiss-Prot
Match: G3PC_TAXBA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Taxus baccata PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.165e-18
Identity = 41/49 (83.67%), Postives = 45/49 (91.84%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKT 148
            F+GDSRSSIFDAKAGIAL+  FVKLVSWYDNEWGYS+RV+DLIVHM  T
Sbjct:  291 FIGDSRSSIFDAKAGIALNDNFVKLVSWYDNEWGYSSRVIDLIVHMDST 339          
BLAST of EY649899 vs. ExPASy Swiss-Prot
Match: G3PC_MESCR (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Mesembryanthemum crystallinum GN=GAPC PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.165e-18
Identity = 41/50 (82.00%), Postives = 47/50 (94.00%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKTQ 151
            F+GD+RSSIFDAKAGI+L+  FVKLVSWYDNEWGYSTRVVDLI+H+SK Q
Sbjct:  288 FIGDNRSSIFDAKAGISLNDNFVKLVSWYDNEWGYSTRVVDLIMHISKCQ 337          
BLAST of EY649899 vs. ExPASy Swiss-Prot
Match: G3PC_CRAPL (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Craterostigma plantagineum GN=GAPC PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.165e-18
Identity = 42/47 (89.36%), Postives = 46/47 (97.87%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMS 142
            FVGDSRSSIFDAKAGIALSKKFVK+V+WYDNEWGYS+RVVDLI HM+
Sbjct:  288 FVGDSRSSIFDAKAGIALSKKFVKIVAWYDNEWGYSSRVVDLIRHMA 334          
BLAST of EY649899 vs. ExPASy Swiss-Prot
Match: G3PC_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 1 OS=Zea mays GN=GAPC1 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 3.693e-18
Identity = 43/50 (86.00%), Postives = 45/50 (90.00%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKTQ 151
            F+GDSRSSIFDAKAGIAL+  FVKLVSWYDNEWGYS RVVDLI HM KTQ
Sbjct:  288 FLGDSRSSIFDAKAGIALNDHFVKLVSWYDNEWGYSNRVVDLIRHMFKTQ 337          
BLAST of EY649899 vs. ExPASy Swiss-Prot
Match: G3PC_DIACA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Dianthus caryophyllus GN=GAPC PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.693e-18
Identity = 41/49 (83.67%), Postives = 45/49 (91.84%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKT 148
            FVGD+RSSIFDAKAGIAL+  F+KLVSWYDNEWGYSTRVVDLI H+ KT
Sbjct:  288 FVGDNRSSIFDAKAGIALNDNFIKLVSWYDNEWGYSTRVVDLIAHIHKT 336          
BLAST of EY649899 vs. ExPASy Swiss-Prot
Match: G3P_ATRNU (Glyceraldehyde-3-phosphate dehydrogenase OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.299e-18
Identity = 42/49 (85.71%), Postives = 45/49 (91.84%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKT 148
            FVGD+RSSIFDAKAGI L+  FVKLVSWYDNEWGYS+RVVDLI HMSKT
Sbjct:  288 FVGDNRSSIFDAKAGICLNGNFVKLVSWYDNEWGYSSRVVDLIRHMSKT 336          
BLAST of EY649899 vs. ExPASy Swiss-Prot
Match: G3PD_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 2 OS=Zea mays GN=GAPC2 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.299e-18
Identity = 42/50 (84.00%), Postives = 44/50 (88.00%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKTQ 151
            F GDSRSSIFDAKAGIAL+  F+KLVSWYDNEWGYS RVVDLI HM KTQ
Sbjct:  288 FTGDSRSSIFDAKAGIALNDHFIKLVSWYDNEWGYSNRVVDLIRHMFKTQ 337          
BLAST of EY649899 vs. ExPASy Swiss-Prot
Match: G3PE_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 3 OS=Zea mays GN=GAPC3 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.074e-17
Identity = 42/50 (84.00%), Postives = 45/50 (90.00%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKTQ 151
            F GDSRSSIFDAKAGIAL+  FVKLVSWYDNEWGYSTRVVDLI HM+ T+
Sbjct:  288 FQGDSRSSIFDAKAGIALNGNFVKLVSWYDNEWGYSTRVVDLIRHMNSTK 337          
BLAST of EY649899 vs. ExPASy Swiss-Prot
Match: G3PC_HORVU (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (Fragment) OS=Hordeum vulgare GN=GAPC PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.403e-17
Identity = 42/50 (84.00%), Postives = 44/50 (88.00%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKTQ 151
            F GDSRSSIFDAKAGIAL+  FVKLVSWYDNEWGYSTRVVDLI HM  T+
Sbjct:  256 FQGDSRSSIFDAKAGIALNDNFVKLVSWYDNEWGYSTRVVDLIRHMHSTK 305          
BLAST of EY649899 vs. ExPASy Swiss-Prot
Match: G3PC_PHYPA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Physcomitrella patens GN=GAPC PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.833e-17
Identity = 41/48 (85.42%), Postives = 44/48 (91.67%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 145
            F+ DSRSSIFDAKAGIALS  FVKLV+WYDNEWGYS RVVDLIVHM+K
Sbjct:  290 FITDSRSSIFDAKAGIALSDTFVKLVAWYDNEWGYSNRVVDLIVHMAK 337          
The following BLAST results are available for this feature:
BLAST of EY649899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 148
Match NameE-valueIdentityDescription
G3PC_TAXBA2.165e-1883.67Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_MESCR2.165e-1882.00Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_CRAPL2.165e-1889.36Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_MAIZE3.693e-1886.00Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_DIACA3.693e-1883.67Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_ATRNU6.299e-1885.71Glyceraldehyde-3-phosphate dehydrogenase OS=Atripl... [more]
G3PD_MAIZE6.299e-1884.00Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PE_MAIZE1.074e-1784.00Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_HORVU1.403e-1784.00Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_PHYPA1.833e-1785.42Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-004-G08-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649899 ID=EY649899; Name=EY649899; organism=Citrus sinensis; type=EST; length=393bp
CTTTGTTGGTGACAGTAGGTCAAGTATCTTTGATGCCAAGGCTGGTATTG
CTTTGAGTAAGAAATTTGTGAAGCTTGTCTCATGGTATGACAATGAGTGG
GGCTACAGTACTCGTGTGGTGGATTTGATTGTCCACATGTCGAAGACCCA
GTAACTTACTCGGCGTGGCTTGAGTATGTAACACGCTTAGTTGTGCTAAG
TGTGGTGTTTCTTTGTGCTAAATGTGGTGTTTGTGTTTCTATGTAAAGGG
TCTGAGTTTAAATAAAATTGTTTCCAAGACATTATCCAGAGCCTTACCTG
CTCATGCAAGGTTGTGCTTAGATTTTCCCTTGTAGTATGCAAGAAGAGTT
GGTGAACCAACTTATGTTTTGTTAGCGAGAAAAAAAAAAAAAA
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