EY649899

Overview
NameEY649899
Unique NameEY649899
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length393
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649899 vs. ExPASy Swiss-Prot
Match: G3P1_KLUMA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluyveromyces marxianus GN=GAP1 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.518e-14
Identity = 34/47 (72.34%), Postives = 42/47 (89.36%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMS 142
            F+GD+ S+IFDA AGI LS KFVKLV+WYDNE+GYSTRVVDL+ H++
Sbjct:  283 FLGDTHSTIFDAAAGIQLSPKFVKLVAWYDNEYGYSTRVVDLVEHVA 329          
BLAST of EY649899 vs. ExPASy Swiss-Prot
Match: G3P_COTJA (Glyceraldehyde-3-phosphate dehydrogenase OS=Coturnix coturnix japonica GN=GAPDH PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 7.207e-14
Identity = 36/50 (72.00%), Postives = 41/50 (82.00%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKTQ 151
            F GDS SS FDA AGIAL+  FVKLVSWYDNE+GYS RVVDL+VHM+  +
Sbjct:  284 FNGDSHSSTFDAGAGIALNDNFVKLVSWYDNEFGYSNRVVDLMVHMASKE 333          
BLAST of EY649899 vs. ExPASy Swiss-Prot
Match: G3P_COLLI (Glyceraldehyde-3-phosphate dehydrogenase OS=Columba livia GN=GAPDH PE=2 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 7.207e-14
Identity = 36/50 (72.00%), Postives = 41/50 (82.00%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKTQ 151
            F GDS SS FDA AGIAL+  FVKLVSWYDNE+GYS RVVDL+VHM+  +
Sbjct:  284 FNGDSHSSTFDAGAGIALNDHFVKLVSWYDNEYGYSNRVVDLMVHMASKE 333          
BLAST of EY649899 vs. ExPASy Swiss-Prot
Match: G3P_XENLA (Glyceraldehyde-3-phosphate dehydrogenase OS=Xenopus laevis GN=gapdh PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 9.413e-14
Identity = 35/50 (70.00%), Postives = 41/50 (82.00%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKTQ 151
            F GD+ SSIFDA AGIAL++ FVKLVSWYDNE GYS RVVDL+ HM+  +
Sbjct:  284 FNGDTHSSIFDADAGIALNENFVKLVSWYDNECGYSNRVVDLVCHMASKE 333          
BLAST of EY649899 vs. ExPASy Swiss-Prot
Match: G3P_USTMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Ustilago maydis GN=GAPD PE=3 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 9.413e-14
Identity = 33/48 (68.75%), Postives = 41/48 (85.42%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 145
            F+G+S SSIFDA AGI+L+  FVKLVSWYDNEWGYS R +DL+V M++
Sbjct:  286 FIGNSHSSIFDAAAGISLNNNFVKLVSWYDNEWGYSNRCLDLLVFMAQ 333          
BLAST of EY649899 vs. ExPASy Swiss-Prot
Match: G3P_OMPOL (Glyceraldehyde-3-phosphate dehydrogenase OS=Omphalotus olearius GN=GPD PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.413e-14
Identity = 33/48 (68.75%), Postives = 41/48 (85.42%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 145
            F G++ SSIFDA AGIAL+K FVKL++WYDNEWGYS RVVDLI  +++
Sbjct:  285 FTGNTHSSIFDASAGIALNKNFVKLIAWYDNEWGYSRRVVDLITFVAQ 332          
BLAST of EY649899 vs. ExPASy Swiss-Prot
Match: G3P_CHICK (Glyceraldehyde-3-phosphate dehydrogenase OS=Gallus gallus GN=GAPDH PE=2 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 9.413e-14
Identity = 36/50 (72.00%), Postives = 41/50 (82.00%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKTQ 151
            F GDS SS FDA AGIAL+  FVKLVSWYDNE+GYS RVVDL+VHM+  +
Sbjct:  284 FNGDSHSSTFDAGAGIALNDHFVKLVSWYDNEFGYSNRVVDLMVHMASKE 333          
BLAST of EY649899 vs. ExPASy Swiss-Prot
Match: G3P1_YEAST (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Saccharomyces cerevisiae GN=TDH1 PE=1 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 9.413e-14
Identity = 34/48 (70.83%), Postives = 42/48 (87.50%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 145
            F+GD+ +SIFDA AGI LS KFVKL+SWYDNE+GYS RVVDLI +++K
Sbjct:  284 FLGDTHASIFDASAGIQLSPKFVKLISWYDNEYGYSARVVDLIEYVAK 331          
BLAST of EY649899 vs. ExPASy Swiss-Prot
Match: G3P1_SCHPO (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Schizosaccharomyces pombe GN=tdh1 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.413e-14
Identity = 34/45 (75.56%), Postives = 38/45 (84.44%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVH 136
            F GD+ SSIFDA AGI LS +FVKLVSWYDNEWGYS RVVDL+ +
Sbjct:  286 FCGDNHSSIFDASAGIQLSPQFVKLVSWYDNEWGYSRRVVDLVAY 330          
BLAST of EY649899 vs. ExPASy Swiss-Prot
Match: G3P1_JACOR (Glyceraldehyde-3-phosphate dehydrogenase, muscle OS=Jaculus orientalis PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 9.413e-14
Identity = 36/50 (72.00%), Postives = 41/50 (82.00%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKTQ 151
            F GDS SS FDA AGIAL+  FVKLVSWYDNE+GYS RVVDL+VHM+  +
Sbjct:  314 FNGDSHSSTFDAGAGIALNDHFVKLVSWYDNEFGYSNRVVDLMVHMASKE 363          
The following BLAST results are available for this feature:
BLAST of EY649899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 148
Match NameE-valueIdentityDescription
G3P1_KLUMA5.518e-1472.34Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluy... [more]
G3P_COTJA7.207e-1472.00Glyceraldehyde-3-phosphate dehydrogenase OS=Coturn... [more]
G3P_COLLI7.207e-1472.00Glyceraldehyde-3-phosphate dehydrogenase OS=Columb... [more]
G3P_XENLA9.413e-1470.00Glyceraldehyde-3-phosphate dehydrogenase OS=Xenopu... [more]
G3P_USTMA9.413e-1468.75Glyceraldehyde-3-phosphate dehydrogenase OS=Ustila... [more]
G3P_OMPOL9.413e-1468.75Glyceraldehyde-3-phosphate dehydrogenase OS=Omphal... [more]
G3P_CHICK9.413e-1472.00Glyceraldehyde-3-phosphate dehydrogenase OS=Gallus... [more]
G3P1_YEAST9.413e-1470.83Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Sacc... [more]
G3P1_SCHPO9.413e-1475.56Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Schi... [more]
G3P1_JACOR9.413e-1472.00Glyceraldehyde-3-phosphate dehydrogenase, muscle O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-004-G08-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649899 ID=EY649899; Name=EY649899; organism=Citrus sinensis; type=EST; length=393bp
CTTTGTTGGTGACAGTAGGTCAAGTATCTTTGATGCCAAGGCTGGTATTG
CTTTGAGTAAGAAATTTGTGAAGCTTGTCTCATGGTATGACAATGAGTGG
GGCTACAGTACTCGTGTGGTGGATTTGATTGTCCACATGTCGAAGACCCA
GTAACTTACTCGGCGTGGCTTGAGTATGTAACACGCTTAGTTGTGCTAAG
TGTGGTGTTTCTTTGTGCTAAATGTGGTGTTTGTGTTTCTATGTAAAGGG
TCTGAGTTTAAATAAAATTGTTTCCAAGACATTATCCAGAGCCTTACCTG
CTCATGCAAGGTTGTGCTTAGATTTTCCCTTGTAGTATGCAAGAAGAGTT
GGTGAACCAACTTATGTTTTGTTAGCGAGAAAAAAAAAAAAAA
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