EY649897
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS24_ARATH (40S ribosomal protein S2-4 OS=Arabidopsis thaliana GN=RPS2D PE=2 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 5.060e-74 Identity = 147/217 (67.74%), Postives = 163/217 (75.12%), Query Frame = 2 Query: 182 DKWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRMGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPRKCCXXXXXXXXXXXXXGRPRLLETLSRHL*VFGEDICLSYT------*FLEETRFVKSHTRVH 814 +KWVPVTKLGRLV+EGKI +EQIYLHSLP+KEYQIID L+G LKDEVMKIMPVQKQTRAGQRTRFKAF+VVGD++GHVGLGVKCSKEVATAIRGAIILAKLSV+P+R GYWGNKIG+PHTVPC VTGKCGSVTVRM APRG+GIVAARVP+K G + L V CL T F +ETRF KS + H Sbjct: 43 EKWVPVTKLGRLVKEGKITKIEQIYLHSLPVKEYQIIDLLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFIVVGDSNGHVGLGVKCSKEVATAIRGAIILAKLSVVPIRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNF-----VKATFDCLQKTYGFLTPEFWKETRFSKSPYQEH 254
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS2_CRIGR (40S ribosomal protein S2 (Fragment) OS=Cricetulus griseus GN=RPS2 PE=2 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 5.237e-73 Identity = 118/152 (77.63%), Postives = 135/152 (88.82%), Query Frame = 2 Query: 191 VPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRMGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPRK 646 +PVTKLGRLV++ KI+ LE+IYL SLPIKE +IID +G LKDEV+KIMPVQKQTRAGQRTRFKAFV +GD +GHVGLGVKCSKEVATAIRGAIILAKLS++PVR GYWGNKIG+PHTVPC VTG+CGSV VR+ APRG GIV+A VP+K Sbjct: 1 IPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKK 152 HSP 2 Score: 42.743 bits (99), Expect = 5.237e-73 Identity = 20/29 (68.97%), Postives = 22/29 (75.86%), Query Frame = 1 Query: 640 KKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 KK+L AGIDD TS+RG T TLGNF KA Sbjct: 151 KKLLMMAGIDDCYTSARGCTATLGNFAKA 179 HSP 3 Score: 31.5722 bits (70), Expect = 5.237e-73 Identity = 10/20 (50.00%), Postives = 16/20 (80.00%), Query Frame = 3 Query: 720 QGTFECLVKTYAFLTPDFWR 779 + TF+ + KTY++LTPD W+ Sbjct: 178 KATFDAISKTYSYLTPDLWK 197
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS2_DICDI (40S ribosomal protein S2 OS=Dictyostelium discoideum GN=rps2 PE=1 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 2.542e-72 Identity = 118/153 (77.12%), Postives = 129/153 (84.31%), Query Frame = 2 Query: 188 WVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRMGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPRK 646 W PVTKLGRLV G + + +IYL SLPIKEYQIID + LKDEVMKI+PVQKQTRAGQRTRFKAFVVVGD +GHVGLGVKC+KEVATAI GAI+ AKLSVIPVR GYWGNK+G PHTVP VTGKCGSV VR+ APRG GIVAARVP+K Sbjct: 49 WTPVTKLGRLVALGLVENIHEIYLFSLPIKEYQIIDKFLN--LKDEVMKIVPVQKQTRAGQRTRFKAFVVVGDHNGHVGLGVKCAKEVATAISGAIVAAKLSVIPVRRGYWGNKLGAPHTVPTKVTGKCGSVAVRLVPAPRGTGIVAARVPKK 199 HSP 2 Score: 48.521 bits (114), Expect = 2.542e-72 Identity = 21/29 (72.41%), Postives = 26/29 (89.66%), Query Frame = 1 Query: 640 KKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 KK+LQ+AG+DDV TSSRG T+T+GNFV A Sbjct: 198 KKLLQYAGVDDVYTSSRGKTRTMGNFVMA 226 HSP 3 Score: 31.9574 bits (71), Expect = 2.542e-72 Identity = 12/22 (54.55%), Postives = 16/22 (72.73%), Query Frame = 3 Query: 726 TFECLVKTYAFLTPDFWRRLGL 791 TF + KT+A+LTPD WR + L Sbjct: 227 TFFAITKTFAYLTPDLWREVKL 248
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS2_SCHPO (40S ribosomal protein S2 OS=Schizosaccharomyces pombe GN=rps2 PE=2 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 9.109e-69 Identity = 111/154 (72.08%), Postives = 136/154 (88.31%), Query Frame = 2 Query: 185 KWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRMGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPRK 646 +WVPVTKLGRLV+ GKI+ +E+IYL+SLPIKEYQI+D + +L DEVMK++PVQKQTRAGQRTRFKAFVV+GD+DGHVGLG+KC+KEVATAIRGAII+ KLS++P+R GYWG +G PHTVP V+GKCGSVTVR+ APRGAG+VAA V ++ Sbjct: 33 EWVPVTKLGRLVKAGKIKSIEEIYLYSLPIKEYQIVDYFLP-RLNDEVMKVVPVQKQTRAGQRTRFKAFVVIGDSDGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWGTALGDPHTVPVKVSGKCGSVTVRLVPAPRGAGLVAAPVTKR 185 HSP 2 Score: 46.9802 bits (110), Expect = 9.109e-69 Identity = 22/30 (73.33%), Postives = 25/30 (83.33%), Query Frame = 1 Query: 637 SKKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 +K+ LQ AGI+D T SRGSTKTLGNFVKA Sbjct: 183 TKRFLQLAGIEDCYTQSRGSTKTLGNFVKA 212
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS2_CAEEL (40S ribosomal protein S2 OS=Caenorhabditis elegans GN=rps-2 PE=1 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 1.083e-66 Identity = 116/154 (75.32%), Postives = 131/154 (85.06%), Query Frame = 2 Query: 185 KWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRMGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPRK 646 +W PVTKLGRLV+E KI LE+IYL+SLPIKE++IID L + LKDEV+KI PVQKQT AGQRTRFKAFV +GD GHVGLGVKCSKEVATAIRGAI+ AKL+V+PVR GYWGNKIG PHTVPC VTGKC SV VR+ APRG GIV+A VP+K Sbjct: 56 EWTPVTKLGRLVKEKKITTLEEIYLNSLPIKEFEIIDALCSN-LKDEVLKISPVQKQTTAGQRTRFKAFVAIGDHAGHVGLGVKCSKEVATAIRGAIVAAKLAVVPVRRGYWGNKIGLPHTVPCKVTGKCASVMVRLIPAPRGTGIVSAPVPKK 208 HSP 2 Score: 41.2022 bits (95), Expect = 1.083e-66 Identity = 20/41 (48.78%), Postives = 27/41 (65.85%), Query Frame = 1 Query: 640 KKVLQFAGIDDVITSSRGSTKTLGNFVKAPLSVW*RHMPFL 762 KK+L AGI+D T+++GST TLGNF KA + R +L Sbjct: 207 KKLLHMAGIEDCYTAAKGSTATLGNFAKATYAALQRTYSYL 247
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS2_LEIAM (40S ribosomal protein S2 OS=Leishmania amazonensis PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 1.600e-64 Identity = 104/155 (67.10%), Postives = 125/155 (80.65%), Query Frame = 2 Query: 185 KWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGH-KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRMGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPRK 646 +WVP TKLGRLV+ K+ LE+I+L S+PIKE+QI+DTLI KL DE+MKI PVQK T AGQRTRFKAF VVGD DGH+G+G + KEV+ AIR ++I AKL+++PVR GYWGNKIG PHT+P VTGKCGSV VR+ APRG GIVAA VP+K Sbjct: 44 EWVPCTKLGRLVKAQKVTSLEEIFLFSMPIKEHQIVDTLIAEGKLHDEMMKIYPVQKATSAGQRTRFKAFNVVGDCDGHIGIGARVGKEVSLAIRASMIAAKLNIVPVRRGYWGNKIGEPHTIPMKVTGKCGSVAVRLVPAPRGTGIVAAPVPKK 198 HSP 2 Score: 43.1282 bits (100), Expect = 1.600e-64 Identity = 18/29 (62.07%), Postives = 24/29 (82.76%), Query Frame = 1 Query: 640 KKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 KK+L+FAG++DV TSSRG T+T GN + A Sbjct: 197 KKILEFAGVEDVYTSSRGKTRTHGNLIMA 225 HSP 3 Score: 31.187 bits (69), Expect = 1.600e-64 Identity = 13/21 (61.90%), Postives = 13/21 (61.90%), Query Frame = 3 Query: 714 LCQGTFECLVKTYAFLTPDFW 776 L TF L KTY FLTPD W Sbjct: 222 LIMATFYALRKTYGFLTPDLW 242
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS2_YEAST (40S ribosomal protein S2 OS=Saccharomyces cerevisiae GN=RPS2 PE=1 SV=3) HSP 1 Score: 218.009 bits (554), Expect = 1.499e-56 Identity = 110/175 (62.86%), Postives = 133/175 (76.00%), Query Frame = 2 Query: 188 WVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRMGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPRKCCXXXXXXXXXXXXXGRPRLLE 712 WVPVTKLGRLV+ GKI +E+I+LHSLP+KE+QIIDTL+ L+DEVM I PVQKQTRAGQRTRFKA VVVGD++GHVGLG+K +KEVA AIR II+AKLSVIP+R GYWG +G+PH++ TGKCGSVTVR+ APRG+GIVA+ +K G+ R LE Sbjct: 35 WVPVTKLGRLVKAGKITTIEEIFLHSLPVKEFQIIDTLLPG-LQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVAGAIRAGIIIAKLSVIPIRRGYWGTNLGQPHSLATKTTGKCGSVTVRLIPAPRGSGIVASPAVKKLLQLAGVEDVYTQSNGKTRTLE 208 HSP 2 Score: 23.8682 bits (50), Expect = 1.499e-56 Identity = 8/19 (42.11%), Postives = 11/19 (57.89%), Query Frame = 3 Query: 720 QGTFECLVKTYAFLTPDFW 776 + F + TY FLTP+ W Sbjct: 212 KAAFVAIGNTYGFLTPNLW 230
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_HYPBU (30S ribosomal protein S5P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rps5p PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.387e-34 Identity = 72/150 (48.00%), Postives = 99/150 (66.00%), Query Frame = 2 Query: 185 KWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--MGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVA 628 +W P T +GRLV+EG+IR L +I+ +LPI E +I+D LIG +LK E + + VQK T AG+ RF+ VV+G+ +G VG+G ++++A AI AI AKL++IPVR G W PH+VP V GK GSV V + APRG G+VA Sbjct: 11 EWQPRTYVGRLVKEGRIRSLSEIFEKNLPILEPEIVDYLIGPELKSETVDVRLVQKMTDAGRINRFRVVVVIGNENGFVGVGQGKARQLAVAIEKAIRNAKLNIIPVRRGCGSWECLCSEPHSVPFTVRGKSGSVEVILKPAPRGTGLVA 160 HSP 2 Score: 33.113 bits (74), Expect = 1.387e-34 Identity = 17/33 (51.52%), Postives = 23/33 (69.70%), Query Frame = 1 Query: 628 G*GSKKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 G +K VL+ AGI DV + ++G T+T NFVKA Sbjct: 161 GDAAKVVLRLAGIRDVWSFTKGDTRTTINFVKA 193 HSP 3 Score: 23.8682 bits (50), Expect = 1.387e-34 Identity = 9/21 (42.86%), Postives = 13/21 (61.90%), Query Frame = 3 Query: 720 QGTFECLVKTYAFLTPDFWRR 782 + T+ L +TY F+TP W R Sbjct: 192 KATYNALKQTYKFVTPLDWAR 212
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_METKA (30S ribosomal protein S5P OS=Methanopyrus kandleri GN=rps5p PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 2.365e-34 Identity = 70/157 (44.59%), Postives = 105/157 (66.88%), Query Frame = 2 Query: 182 DKWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--MGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPRK 646 ++W P TKLGR+V+EG+I+ +++++ I E +I+D L+ L++EV+ + VQK ++G+R RF+ VVVG+ DG VG+G ++EV AIR AI AKL++I VR G W GRPH++P +TGKCGSV + + APRG G+VA +K Sbjct: 8 EEWEPKTKLGRMVKEGEIKTIDEVFAQGWKILEPEIVDWLLPD-LEEEVLDVNMVQKMHKSGRRVRFRVTVVVGNKDGFVGVGQGKAREVGPAIRAAIDRAKLNIIKVRRGCGSWECGCGRPHSIPFEITGKCGSVRITLKPAPRGTGLVAGETAQK 163 HSP 2 Score: 30.0314 bits (66), Expect = 2.365e-34 Identity = 16/35 (45.71%), Postives = 23/35 (65.71%), Query Frame = 1 Query: 637 SKKVLQFAGIDDVITSS-----RGSTKTLGNFVKA 726 ++KVL+ AGI+DV T + +G T+T NF KA Sbjct: 161 AQKVLEMAGIEDVWTKTTGGKGKGETRTTINFAKA 195
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_THEPD (30S ribosomal protein S5P OS=Thermofilum pendens (strain Hrk 5) GN=rps5p PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.130e-33 Identity = 66/155 (42.58%), Postives = 105/155 (67.74%), Query Frame = 2 Query: 185 KWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--MGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPR 643 +W P T LGRLV EGKI+ +++++ ++PI+E +IIDTL+ LK EV+ + VQ+QT +G+ ++++ V VG+ DG+VG+G+ S+++ AI A AKL+++PVR G W G PH++P V GK GSV + + AP+G G+VA+ V + Sbjct: 4 EWQPRTLLGRLVVEGKIKSIDEVFARNMPIREVEIIDTLLPG-LKSEVLSVGFVQRQTDSGEVSQYQVTVAVGNEDGYVGVGMGKSRQIGIAIEKATRRAKLNIVPVRRGCGSWECLCGEPHSIPFKVEGKAGSVKIELIPAPKGVGLVASDVAK 157 HSP 2 Score: 30.0314 bits (66), Expect = 1.130e-33 Identity = 15/30 (50.00%), Postives = 19/30 (63.33%), Query Frame = 1 Query: 637 SKKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 +K VL+ AGI DV + S G T+T N KA Sbjct: 156 AKTVLRLAGIKDVWSRSYGETRTTHNMAKA 185 HSP 3 Score: 26.1794 bits (56), Expect = 1.130e-33 Identity = 9/21 (42.86%), Postives = 13/21 (61.90%), Query Frame = 3 Query: 714 LCQGTFECLVKTYAFLTPDFW 776 + + +E L KTY F +PD W Sbjct: 182 MAKAVYEALKKTYQFYSPDQW 202 The following BLAST results are available for this feature:
BLAST of EY649897 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >EY649897 ID=EY649897; Name=EY649897; organism=Citrus sinensis; type=EST; length=940bpback to top |