EY649897
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_METMA (30S ribosomal protein S5P OS=Methanosarcina mazei GN=rps5p PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 6.086e-32 Identity = 73/155 (47.10%), Postives = 99/155 (63.87%), Query Frame = 2 Query: 188 WVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--MGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPRK 646 WVP T+LG+LV EG++ +++ LPI+E QIID L+ L+DEV+ I VQ+ T +G+R +F+A V+VG+ +G+VGLG +V AIR AI AKL++ +R G W G PHTVP VTGK GSV+V + APRG GI A K Sbjct: 7 WVPKTRLGKLVVEGQVASMDEAIKSGLPIREPQIIDMLLPD-LEDEVLDINMVQRMTDSGRRVKFRATVIVGNRNGYVGLGQAKDVQVGPAIRKAIDAAKLNITYIRRGCGSWECACGLPHTVPYEVTGKAGSVSVTLIPAPRGLGIAAGNTATK 160 HSP 2 Score: 30.0314 bits (66), Expect = 6.086e-32 Identity = 15/28 (53.57%), Postives = 20/28 (71.43%), Query Frame = 1 Query: 643 KVLQFAGIDDVITSSRGSTKTLGNFVKA 726 KVL+ AGI DV T + G+T++ NF KA Sbjct: 160 KVLEKAGIKDVWTKTFGTTRSTLNFAKA 187
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_METAC (30S ribosomal protein S5P OS=Methanosarcina acetivorans GN=rps5p PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 6.086e-32 Identity = 73/155 (47.10%), Postives = 99/155 (63.87%), Query Frame = 2 Query: 188 WVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--MGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPRK 646 WVP T+LG+LV EG++ +++ LPI+E QIID L+ L+DEV+ I VQ+ T +G+R +F+A V+VG+ +G+VGLG +V AIR AI AKL++ +R G W G PHTVP VTGK GSV+V + APRG GI A K Sbjct: 7 WVPKTRLGKLVVEGQVASMDEAIKSGLPIREPQIIDMLLPD-LEDEVLDINMVQRMTDSGRRVKFRATVIVGNRNGYVGLGQAKDVQVGPAIRKAIDAAKLNITYIRRGCGSWECACGLPHTVPYEVTGKAGSVSVTLIPAPRGLGIAAGNTATK 160 HSP 2 Score: 30.0314 bits (66), Expect = 6.086e-32 Identity = 15/28 (53.57%), Postives = 20/28 (71.43%), Query Frame = 1 Query: 643 KVLQFAGIDDVITSSRGSTKTLGNFVKA 726 KVL+ AGI DV T + G+T++ NF KA Sbjct: 160 KVLEKAGIKDVWTKTFGTTRSTLNFAKA 187
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_METBU (30S ribosomal protein S5P OS=Methanococcoides burtonii (strain DSM 6242) GN=rps5p PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 7.923e-32 Identity = 69/157 (43.95%), Postives = 101/157 (64.33%), Query Frame = 2 Query: 182 DKWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--MGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPRK 646 ++WVP T+LG+LV +G++ +++ LPI+E +I+D L+ +L+DEV+ I VQ+ T +G+R +F+A V+VG+ DG VGLG +V AIR AI AK+++ ++ G W G PHTVP V GK GSVTV + APRG G+ A RK Sbjct: 7 EEWVPQTRLGKLVFDGQVTSMDEAMDSGLPIRESKIVDLLLP-ELEDEVLDINMVQRMTDSGRRVKFRATVIVGNGDGFVGLGQAKDVQVGPAIRKAIDNAKINITRIKRGCGSWECGCGLPHTVPSEVNGKAGSVTVVLKPAPRGLGLAAGGTARK 162 HSP 2 Score: 32.7278 bits (73), Expect = 7.923e-32 Identity = 15/30 (50.00%), Postives = 21/30 (70.00%), Query Frame = 1 Query: 637 SKKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 ++KVL+ AG+ DV T + G T+T NF KA Sbjct: 160 ARKVLEKAGVKDVWTRTEGQTRTTLNFAKA 189
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_SULIN (30S ribosomal protein S5P OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rps5p PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.278e-31 Identity = 66/154 (42.86%), Postives = 101/154 (65.58%), Query Frame = 2 Query: 182 DKWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--MGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARV 637 ++W P T +G LV+ GKI +++++ +LPI E +I+D L+ KLK EV+ I VQKQT AG+ +R+K V++G+ DG+V +G +K++ AI+ AI AK++++PVR G W G PH++P V GK GSV V + AP+G G+V V Sbjct: 11 EEWKPRTSIGNLVKNGKISSIKELFDRNLPITEPEIVDVLLP-KLKYEVVDIKVVQKQTDAGEISRYKVLVIMGNMDGYVSIGTGKAKQLRVAIQKAIRDAKMNILPVRRGCGSWQCTCGEPHSLPFKVVGKAGSVEVNLLPAPKGTGLVVGSV 163 HSP 2 Score: 31.187 bits (69), Expect = 2.278e-31 Identity = 14/32 (43.75%), Postives = 22/32 (68.75%), Query Frame = 1 Query: 640 KKVLQFAGIDDVITSSRGSTKTLGNFVKAPLS 735 K +L +AGI D ++++G T+T NFV+A S Sbjct: 165 KTLLTYAGIRDAWSTTKGETRTTENFVRAGYS 196
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_ARCFU (30S ribosomal protein S5P OS=Archaeoglobus fulgidus GN=rps5p PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 2.282e-31 Identity = 67/157 (42.68%), Postives = 103/157 (65.61%), Query Frame = 2 Query: 182 DKWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--MGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPRK 646 + WVP TKLGRLV +GKI+ +++ +LP+KE +I+D L+ L+D+V++I VQ+ T +G+RT+F+ VVG+ +G+VG+G + +VA AI+ AI AKL++ V+ G W G H++P VTG GSV V + P+G GIVA V ++ Sbjct: 3 EDWVPKTKLGRLVADGKIKTMDEALASNLPLKEPEIVDILLPD-LEDDVLEISMVQRMTDSGRRTKFRVTAVVGNRNGYVGIGTGKASQVAPAIQKAINNAKLNIFKVQRGCGSWECGCGGDHSLPFKVTGTSGSVRVTLIPGPKGLGIVAGDVAKR 158 HSP 2 Score: 33.4982 bits (75), Expect = 2.282e-31 Identity = 14/30 (46.67%), Postives = 22/30 (73.33%), Query Frame = 1 Query: 637 SKKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 +K+V++ AG+ DV + ++G TKT NF KA Sbjct: 156 AKRVIELAGVKDVWSFTKGQTKTTVNFAKA 185
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_METVS (30S ribosomal protein S5P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rps5p PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.024e-31 Identity = 69/156 (44.23%), Postives = 101/156 (64.74%), Query Frame = 2 Query: 182 DKWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRM--GYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPR 643 D W P T++GR+V+EG I + I LP+ E +I+D L+ L+++V+ + VQ+ ++G+R R++A VVVG+ +G+VG+G+ SKEV AIR AI AKLS+I VR+ G W G PH++P G CGSV V + APRG G+VA V + Sbjct: 14 DSWEPKTQVGRMVKEGTISDISYIMDKGLPLLEPEIVDVLLPD-LEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAQAKLSLIKVRVGCGSWECGCGSPHSIPFTAKGTCGSVKVELLPAPRGVGLVAGNVAK 168 HSP 2 Score: 28.4906 bits (62), Expect = 5.024e-31 Identity = 13/30 (43.33%), Postives = 19/30 (63.33%), Query Frame = 1 Query: 637 SKKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 +K VL AG+ D T++ G T+T NF +A Sbjct: 167 AKAVLGLAGVKDAWTTTYGDTRTTYNFAEA 196
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_METVA (30S ribosomal protein S5P OS=Methanococcus vannielii GN=rps5p PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.024e-31 Identity = 69/156 (44.23%), Postives = 101/156 (64.74%), Query Frame = 2 Query: 182 DKWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRM--GYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPR 643 D W P T++GR+V+EG I + I LP+ E +I+D L+ L+++V+ + VQ+ ++G+R R++A VVVG+ +G+VG+G+ SKEV AIR AI AKLS+I VR+ G W G PH++P G CGSV V + APRG G+VA V + Sbjct: 14 DSWEPKTQVGRMVKEGTISDISYIMDKGLPLLEPEIVDVLLPD-LEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAQAKLSLIKVRVGCGSWECGCGSPHSIPFTAKGTCGSVKVELLPAPRGVGLVAGNVAK 168 HSP 2 Score: 28.4906 bits (62), Expect = 5.024e-31 Identity = 13/30 (43.33%), Postives = 19/30 (63.33%), Query Frame = 1 Query: 637 SKKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 +K VL AG+ D T++ G T+T NF +A Sbjct: 167 AKAVLGLAGVKDAWTTTYGDTRTTYNFAEA 196
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_THEAC (30S ribosomal protein S5P OS=Thermoplasma acidophilum GN=rps5p PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 6.547e-31 Identity = 71/156 (45.51%), Postives = 101/156 (64.74%), Query Frame = 2 Query: 182 DKWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--MGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPR 643 ++WVP T+LG+LV G+I+ + + LP+KEY+I+D L+ + LKDEV+ I Q+ T +G+R + VVVG+ DG+VGLG+ SKE A AIR A+I AKL+++ +R G W GR HT+P V GK GSV + + APRG G+ V R Sbjct: 3 EEWVPKTQLGKLVASGQIKTMGEALRSKLPLKEYEIVDYLLPN-LKDEVIDIKRAQRMTDSGRRMTYSITVVVGNGDGYVGLGIGRSKEAAPAIRKALINAKLNIMEIRRGCGSWECGCGRAHTLPFLVQGKSGSVRITLKPAPRGVGLAVGDVAR 157 HSP 2 Score: 24.2534 bits (51), Expect = 6.547e-31 Identity = 11/30 (36.67%), Postives = 17/30 (56.67%), Query Frame = 1 Query: 637 SKKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 ++ +L AGI+D + G TKT N+ A Sbjct: 156 ARTILSIAGIEDAWGFAAGHTKTTVNYALA 185
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_THEVO (30S ribosomal protein S5P OS=Thermoplasma volcanium GN=rps5p PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.525e-31 Identity = 68/156 (43.59%), Postives = 100/156 (64.10%), Query Frame = 2 Query: 182 DKWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--MGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPR 643 D+W P T+LG+LV G+I+ + + LP+KEY+I+D L+ + +KDEV+ I Q+ T +G+R + VVVG+ DG++GLG+ SKE A AIR A+I AKL+++ +R G W GR HT+P V GK GSV + + APRG G+ V + Sbjct: 3 DEWTPRTQLGKLVASGQIKTISEALKTKLPLKEYEIVDYLLPN-IKDEVIDIKRAQRMTDSGRRMTYSITVVVGNEDGYIGLGIGRSKEAAPAIRKALINAKLNIMEIRRGCGSWECGCGRAHTLPFLVEGKSGSVRITLKPAPRGVGLAVGNVAK 157 HSP 2 Score: 25.0238 bits (53), Expect = 8.525e-31 Identity = 12/30 (40.00%), Postives = 18/30 (60.00%), Query Frame = 1 Query: 637 SKKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 +K +L+ AGI+D + G TKT N+ A Sbjct: 156 AKIILRMAGIEDAWGFAAGHTKTTVNYALA 185
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_SULTO (30S ribosomal protein S5P OS=Sulfolobus tokodaii GN=rps5p PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 8.531e-31 Identity = 67/150 (44.67%), Postives = 100/150 (66.67%), Query Frame = 2 Query: 182 DKWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--MGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIV 625 ++W P TK+G+LV+EGKI +++I+ + PI E +I+D L+ KLK EVM I VQKQT AG+ +++K +V+G+ DG+V G +K++ AI+ AI AK+++IPVR G W G H++P V GK GSV V + AP+G G+V Sbjct: 11 EEWKPRTKVGQLVKEGKITSMKEIFEKNYPITEPEIVDVLLP-KLKYEVMDIKIVQKQTDAGEISKYKVLIVMGNMDGYVSYGTGKAKQLRVAIQKAIKNAKMNIIPVRRGCGSWECTCGEAHSLPFKVYGKAGSVEVLLMPAPKGTGLV 159 HSP 2 Score: 31.9574 bits (71), Expect = 8.531e-31 Identity = 15/29 (51.72%), Postives = 20/29 (68.97%), Query Frame = 1 Query: 640 KKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 K +L +AGI D + +RGST T NF+KA Sbjct: 165 KTLLTYAGIKDAWSLTRGSTYTTENFIKA 193 The following BLAST results are available for this feature:
BLAST of EY649897 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY649897 ID=EY649897; Name=EY649897; organism=Citrus sinensis; type=EST; length=940bpback to top |