EY649897

Overview
NameEY649897
Unique NameEY649897
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length940
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_METMA (30S ribosomal protein S5P OS=Methanosarcina mazei GN=rps5p PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 6.086e-32
Identity = 73/155 (47.10%), Postives = 99/155 (63.87%), Query Frame = 2
Query:  188 WVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--MGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPRK 646
            WVP T+LG+LV EG++  +++     LPI+E QIID L+   L+DEV+ I  VQ+ T +G+R +F+A V+VG+ +G+VGLG     +V  AIR AI  AKL++  +R   G W    G PHTVP  VTGK GSV+V +  APRG GI A     K
Sbjct:    7 WVPKTRLGKLVVEGQVASMDEAIKSGLPIREPQIIDMLLPD-LEDEVLDINMVQRMTDSGRRVKFRATVIVGNRNGYVGLGQAKDVQVGPAIRKAIDAAKLNITYIRRGCGSWECACGLPHTVPYEVTGKAGSVSVTLIPAPRGLGIAAGNTATK 160          

HSP 2 Score: 30.0314 bits (66), Expect = 6.086e-32
Identity = 15/28 (53.57%), Postives = 20/28 (71.43%), Query Frame = 1
Query:  643 KVLQFAGIDDVITSSRGSTKTLGNFVKA 726
            KVL+ AGI DV T + G+T++  NF KA
Sbjct:  160 KVLEKAGIKDVWTKTFGTTRSTLNFAKA 187          
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_METAC (30S ribosomal protein S5P OS=Methanosarcina acetivorans GN=rps5p PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 6.086e-32
Identity = 73/155 (47.10%), Postives = 99/155 (63.87%), Query Frame = 2
Query:  188 WVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--MGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPRK 646
            WVP T+LG+LV EG++  +++     LPI+E QIID L+   L+DEV+ I  VQ+ T +G+R +F+A V+VG+ +G+VGLG     +V  AIR AI  AKL++  +R   G W    G PHTVP  VTGK GSV+V +  APRG GI A     K
Sbjct:    7 WVPKTRLGKLVVEGQVASMDEAIKSGLPIREPQIIDMLLPD-LEDEVLDINMVQRMTDSGRRVKFRATVIVGNRNGYVGLGQAKDVQVGPAIRKAIDAAKLNITYIRRGCGSWECACGLPHTVPYEVTGKAGSVSVTLIPAPRGLGIAAGNTATK 160          

HSP 2 Score: 30.0314 bits (66), Expect = 6.086e-32
Identity = 15/28 (53.57%), Postives = 20/28 (71.43%), Query Frame = 1
Query:  643 KVLQFAGIDDVITSSRGSTKTLGNFVKA 726
            KVL+ AGI DV T + G+T++  NF KA
Sbjct:  160 KVLEKAGIKDVWTKTFGTTRSTLNFAKA 187          
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_METBU (30S ribosomal protein S5P OS=Methanococcoides burtonii (strain DSM 6242) GN=rps5p PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 7.923e-32
Identity = 69/157 (43.95%), Postives = 101/157 (64.33%), Query Frame = 2
Query:  182 DKWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--MGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPRK 646
            ++WVP T+LG+LV +G++  +++     LPI+E +I+D L+  +L+DEV+ I  VQ+ T +G+R +F+A V+VG+ DG VGLG     +V  AIR AI  AK+++  ++   G W    G PHTVP  V GK GSVTV +  APRG G+ A    RK
Sbjct:    7 EEWVPQTRLGKLVFDGQVTSMDEAMDSGLPIRESKIVDLLLP-ELEDEVLDINMVQRMTDSGRRVKFRATVIVGNGDGFVGLGQAKDVQVGPAIRKAIDNAKINITRIKRGCGSWECGCGLPHTVPSEVNGKAGSVTVVLKPAPRGLGLAAGGTARK 162          

HSP 2 Score: 32.7278 bits (73), Expect = 7.923e-32
Identity = 15/30 (50.00%), Postives = 21/30 (70.00%), Query Frame = 1
Query:  637 SKKVLQFAGIDDVITSSRGSTKTLGNFVKA 726
            ++KVL+ AG+ DV T + G T+T  NF KA
Sbjct:  160 ARKVLEKAGVKDVWTRTEGQTRTTLNFAKA 189          
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_SULIN (30S ribosomal protein S5P OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rps5p PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.278e-31
Identity = 66/154 (42.86%), Postives = 101/154 (65.58%), Query Frame = 2
Query:  182 DKWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--MGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARV 637
            ++W P T +G LV+ GKI  +++++  +LPI E +I+D L+  KLK EV+ I  VQKQT AG+ +R+K  V++G+ DG+V +G   +K++  AI+ AI  AK++++PVR   G W    G PH++P  V GK GSV V +  AP+G G+V   V
Sbjct:   11 EEWKPRTSIGNLVKNGKISSIKELFDRNLPITEPEIVDVLLP-KLKYEVVDIKVVQKQTDAGEISRYKVLVIMGNMDGYVSIGTGKAKQLRVAIQKAIRDAKMNILPVRRGCGSWQCTCGEPHSLPFKVVGKAGSVEVNLLPAPKGTGLVVGSV 163          

HSP 2 Score: 31.187 bits (69), Expect = 2.278e-31
Identity = 14/32 (43.75%), Postives = 22/32 (68.75%), Query Frame = 1
Query:  640 KKVLQFAGIDDVITSSRGSTKTLGNFVKAPLS 735
            K +L +AGI D  ++++G T+T  NFV+A  S
Sbjct:  165 KTLLTYAGIRDAWSTTKGETRTTENFVRAGYS 196          
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_ARCFU (30S ribosomal protein S5P OS=Archaeoglobus fulgidus GN=rps5p PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.282e-31
Identity = 67/157 (42.68%), Postives = 103/157 (65.61%), Query Frame = 2
Query:  182 DKWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--MGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPRK 646
            + WVP TKLGRLV +GKI+ +++    +LP+KE +I+D L+   L+D+V++I  VQ+ T +G+RT+F+   VVG+ +G+VG+G   + +VA AI+ AI  AKL++  V+   G W    G  H++P  VTG  GSV V +   P+G GIVA  V ++
Sbjct:    3 EDWVPKTKLGRLVADGKIKTMDEALASNLPLKEPEIVDILLPD-LEDDVLEISMVQRMTDSGRRTKFRVTAVVGNRNGYVGIGTGKASQVAPAIQKAINNAKLNIFKVQRGCGSWECGCGGDHSLPFKVTGTSGSVRVTLIPGPKGLGIVAGDVAKR 158          

HSP 2 Score: 33.4982 bits (75), Expect = 2.282e-31
Identity = 14/30 (46.67%), Postives = 22/30 (73.33%), Query Frame = 1
Query:  637 SKKVLQFAGIDDVITSSRGSTKTLGNFVKA 726
            +K+V++ AG+ DV + ++G TKT  NF KA
Sbjct:  156 AKRVIELAGVKDVWSFTKGQTKTTVNFAKA 185          
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_METVS (30S ribosomal protein S5P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rps5p PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.024e-31
Identity = 69/156 (44.23%), Postives = 101/156 (64.74%), Query Frame = 2
Query:  182 DKWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRM--GYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPR 643
            D W P T++GR+V+EG I  +  I    LP+ E +I+D L+   L+++V+ +  VQ+  ++G+R R++A VVVG+ +G+VG+G+  SKEV  AIR AI  AKLS+I VR+  G W    G PH++P    G CGSV V +  APRG G+VA  V +
Sbjct:   14 DSWEPKTQVGRMVKEGTISDISYIMDKGLPLLEPEIVDVLLPD-LEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAQAKLSLIKVRVGCGSWECGCGSPHSIPFTAKGTCGSVKVELLPAPRGVGLVAGNVAK 168          

HSP 2 Score: 28.4906 bits (62), Expect = 5.024e-31
Identity = 13/30 (43.33%), Postives = 19/30 (63.33%), Query Frame = 1
Query:  637 SKKVLQFAGIDDVITSSRGSTKTLGNFVKA 726
            +K VL  AG+ D  T++ G T+T  NF +A
Sbjct:  167 AKAVLGLAGVKDAWTTTYGDTRTTYNFAEA 196          
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_METVA (30S ribosomal protein S5P OS=Methanococcus vannielii GN=rps5p PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.024e-31
Identity = 69/156 (44.23%), Postives = 101/156 (64.74%), Query Frame = 2
Query:  182 DKWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRM--GYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPR 643
            D W P T++GR+V+EG I  +  I    LP+ E +I+D L+   L+++V+ +  VQ+  ++G+R R++A VVVG+ +G+VG+G+  SKEV  AIR AI  AKLS+I VR+  G W    G PH++P    G CGSV V +  APRG G+VA  V +
Sbjct:   14 DSWEPKTQVGRMVKEGTISDISYIMDKGLPLLEPEIVDVLLPD-LEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAQAKLSLIKVRVGCGSWECGCGSPHSIPFTAKGTCGSVKVELLPAPRGVGLVAGNVAK 168          

HSP 2 Score: 28.4906 bits (62), Expect = 5.024e-31
Identity = 13/30 (43.33%), Postives = 19/30 (63.33%), Query Frame = 1
Query:  637 SKKVLQFAGIDDVITSSRGSTKTLGNFVKA 726
            +K VL  AG+ D  T++ G T+T  NF +A
Sbjct:  167 AKAVLGLAGVKDAWTTTYGDTRTTYNFAEA 196          
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_THEAC (30S ribosomal protein S5P OS=Thermoplasma acidophilum GN=rps5p PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 6.547e-31
Identity = 71/156 (45.51%), Postives = 101/156 (64.74%), Query Frame = 2
Query:  182 DKWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--MGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPR 643
            ++WVP T+LG+LV  G+I+ + +     LP+KEY+I+D L+ + LKDEV+ I   Q+ T +G+R  +   VVVG+ DG+VGLG+  SKE A AIR A+I AKL+++ +R   G W    GR HT+P  V GK GSV + +  APRG G+    V R
Sbjct:    3 EEWVPKTQLGKLVASGQIKTMGEALRSKLPLKEYEIVDYLLPN-LKDEVIDIKRAQRMTDSGRRMTYSITVVVGNGDGYVGLGIGRSKEAAPAIRKALINAKLNIMEIRRGCGSWECGCGRAHTLPFLVQGKSGSVRITLKPAPRGVGLAVGDVAR 157          

HSP 2 Score: 24.2534 bits (51), Expect = 6.547e-31
Identity = 11/30 (36.67%), Postives = 17/30 (56.67%), Query Frame = 1
Query:  637 SKKVLQFAGIDDVITSSRGSTKTLGNFVKA 726
            ++ +L  AGI+D    + G TKT  N+  A
Sbjct:  156 ARTILSIAGIEDAWGFAAGHTKTTVNYALA 185          
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_THEVO (30S ribosomal protein S5P OS=Thermoplasma volcanium GN=rps5p PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.525e-31
Identity = 68/156 (43.59%), Postives = 100/156 (64.10%), Query Frame = 2
Query:  182 DKWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--MGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPR 643
            D+W P T+LG+LV  G+I+ + +     LP+KEY+I+D L+ + +KDEV+ I   Q+ T +G+R  +   VVVG+ DG++GLG+  SKE A AIR A+I AKL+++ +R   G W    GR HT+P  V GK GSV + +  APRG G+    V +
Sbjct:    3 DEWTPRTQLGKLVASGQIKTISEALKTKLPLKEYEIVDYLLPN-IKDEVIDIKRAQRMTDSGRRMTYSITVVVGNEDGYIGLGIGRSKEAAPAIRKALINAKLNIMEIRRGCGSWECGCGRAHTLPFLVEGKSGSVRITLKPAPRGVGLAVGNVAK 157          

HSP 2 Score: 25.0238 bits (53), Expect = 8.525e-31
Identity = 12/30 (40.00%), Postives = 18/30 (60.00%), Query Frame = 1
Query:  637 SKKVLQFAGIDDVITSSRGSTKTLGNFVKA 726
            +K +L+ AGI+D    + G TKT  N+  A
Sbjct:  156 AKIILRMAGIEDAWGFAAGHTKTTVNYALA 185          
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_SULTO (30S ribosomal protein S5P OS=Sulfolobus tokodaii GN=rps5p PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 8.531e-31
Identity = 67/150 (44.67%), Postives = 100/150 (66.67%), Query Frame = 2
Query:  182 DKWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--MGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIV 625
            ++W P TK+G+LV+EGKI  +++I+  + PI E +I+D L+  KLK EVM I  VQKQT AG+ +++K  +V+G+ DG+V  G   +K++  AI+ AI  AK+++IPVR   G W    G  H++P  V GK GSV V +  AP+G G+V
Sbjct:   11 EEWKPRTKVGQLVKEGKITSMKEIFEKNYPITEPEIVDVLLP-KLKYEVMDIKIVQKQTDAGEISKYKVLIVMGNMDGYVSYGTGKAKQLRVAIQKAIKNAKMNIIPVRRGCGSWECTCGEAHSLPFKVYGKAGSVEVLLMPAPKGTGLV 159          

HSP 2 Score: 31.9574 bits (71), Expect = 8.531e-31
Identity = 15/29 (51.72%), Postives = 20/29 (68.97%), Query Frame = 1
Query:  640 KKVLQFAGIDDVITSSRGSTKTLGNFVKA 726
            K +L +AGI D  + +RGST T  NF+KA
Sbjct:  165 KTLLTYAGIKDAWSLTRGSTYTTENFIKA 193          
The following BLAST results are available for this feature:
BLAST of EY649897 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
RS5_METMA6.086e-3247.1030S ribosomal protein S5P OS=Methanosarcina mazei ... [more]
RS5_METAC6.086e-3247.1030S ribosomal protein S5P OS=Methanosarcina acetiv... [more]
RS5_METBU7.923e-3243.9530S ribosomal protein S5P OS=Methanococcoides burt... [more]
RS5_SULIN2.278e-3142.8630S ribosomal protein S5P OS=Sulfolobus islandicus... [more]
RS5_ARCFU2.282e-3142.6830S ribosomal protein S5P OS=Archaeoglobus fulgidu... [more]
RS5_METVS5.024e-3144.2330S ribosomal protein S5P OS=Methanococcus vanniel... [more]
RS5_METVA5.024e-3144.2330S ribosomal protein S5P OS=Methanococcus vanniel... [more]
RS5_THEAC6.547e-3145.5130S ribosomal protein S5P OS=Thermoplasma acidophi... [more]
RS5_THEVO8.525e-3143.5930S ribosomal protein S5P OS=Thermoplasma volcaniu... [more]
RS5_SULTO8.531e-3144.6730S ribosomal protein S5P OS=Sulfolobus tokodaii G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-004-G06-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649897 ID=EY649897; Name=EY649897; organism=Citrus sinensis; type=EST; length=940bp
CTCGCATTTTTCACTCTCCCAAATCCCAAACCCTAGCTTCAAACCCTAAA
CACACAAGAACAAAACCATGGCTGAACGATGTGGCGAGCGCGGTGCATTC
GGACGCGGCTTCGGCCGTGGTGGACGGGGCGACCGTGGAGGCCCACGTGG
CCGTCGCCGCGCTGGACGCAGAGAGGAATAAGATAAGTGGGTCCCAGTCA
CGAAACTCGGCCGTCTGGTGAGAGAAGGCAAGATCAGGATCCTCGAGCAA
ATCTACCTCCACTCGCTCCCAATCAAGGAGTATCAAATCATCGACACGCT
TATCGGCCACAAATTGAAGGACGAGGTCATGAAGATCATGCCGGTGCAGA
AACAGACACGTGCCGGTCAGAGGACGAGGTTCAAGGCCTTCGTCGTCGTC
GGTGACACGGACGGCCACGTGGGTCTTGGCGTTAAGTGCTCCAAAGAGGT
TGCCACTGCCATCCGTGGCGCTATCATATTGGCGAAGCTGTCGGTGATTC
CGGTGAGAATGGGTTACTGGGGTAACAAGATCGGGAGGCCACACACCGTG
CCGTGTAATGTGACCGGTAAGTGTGGCAGTGTCACCGTGAGGATGGGTTC
TGCCCCACGTGGTGCCGGAATTGTGGCGGCTAGGGTTCCAAGAAAGTGCT
GCAGTTTGCTGGTATTGACGATGTTATCACATCTTCTCGTGGGTCGACCA
AGACTCTTGGAAACTTTGTCAAGGCACCTTTGAGTGTTTGGTGAAGACAT
ATGCCTTTCTTACACCTGATTTCTGGAGGAGACTCGGTTTGTGAAATCTC
ATACCAGAGTACACAGAATCTGTGACGCCAAAGCCCATCACCAAGCAGTC
ATACAGGAGGGGGTCAAGGTGAACTTTAGCTCTTAGGCTGCTGGAAAGGG
AGACATAAAAGGAAGGGATTGGGTGACTCTTAGATAACTT
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