EY649897
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_STAMF (30S ribosomal protein S5P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rps5p PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 8.531e-31 Identity = 67/151 (44.37%), Postives = 100/151 (66.23%), Query Frame = 2 Query: 182 DKWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--MGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVA 628 + WVP T++G++V EGKI L++I+ +LP+ E +I+D L+ LK E + + VQK T AG+R+RF+ VVVG+ DG VG+G +++ A+R A+ AKL++ PVR G W + G PH++P V GK GSV V + AP+G G+VA Sbjct: 12 ETWVPRTRVGKMVVEGKITSLKEIFDRNLPLLEPEIVDYLLPD-LKYERLDVGIVQKVTDAGRRSRFRVVVVVGNEDGFVGVGSGKARQYLVALRKALRNAKLNITPVRRGCGSWECRCGEPHSIPFTVQGKSGSVVVVLKPAPKGTGLVA 161 HSP 2 Score: 33.113 bits (74), Expect = 8.531e-31 Identity = 17/30 (56.67%), Postives = 20/30 (66.67%), Query Frame = 1 Query: 637 SKKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 +K VL+ AGI DV T + G TKT NF KA Sbjct: 165 AKAVLRMAGIKDVWTETFGKTKTTLNFAKA 194
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_PYRFU (30S ribosomal protein S5P OS=Pyrococcus furiosus GN=rps5p PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.880e-30 Identity = 69/160 (43.12%), Postives = 96/160 (60.00%), Query Frame = 2 Query: 182 DKWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTL---IGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--MGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPRK 646 D+W P TKLG +V+EG+I + +I+ IKE +IID L + + EV+ I + T +G+R RF+ VG+ DG+VGLG+ KEV AIR AI AKL++I ++ G W + RPH+VP V GK GSV VR+ PRG G+V V +K Sbjct: 14 DEWEPKTKLGMMVKEGQITDIHEIFRRGYQIKEPEIIDVLLPEVNARENQEVLDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGIGHGKEVGIAIRKAINYAKLNIIEIKRGCGSWECRCRRPHSVPFAVEGKEGSVRVRLIPGPRGLGLVIGDVGKK 173 HSP 2 Score: 32.3426 bits (72), Expect = 1.880e-30 Identity = 14/29 (48.28%), Postives = 20/29 (68.97%), Query Frame = 1 Query: 640 KKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 KK+L+ AG+ DV + + G T+T NF KA Sbjct: 172 KKILRLAGVQDVWSQTFGETRTTVNFAKA 200
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_METHJ (30S ribosomal protein S5P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rps5p PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.886e-30 Identity = 64/156 (41.03%), Postives = 99/156 (63.46%), Query Frame = 2 Query: 185 KWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--MGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPRK 646 +WVP+T LGR+V+ G+I+ +++I PIKE +I+D + L DEV+ I VQ+ T +G+R +F+A VVVG+ DG++G G +V AI+ AI+ AK++++ VR G W PH++P VTG GSV V + AP+G G+V + +K Sbjct: 7 EWVPLTGLGRMVQAGEIKSIDEILSSGKPIKEPEIVDAFLPD-LVDEVLDINMVQRMTDSGRRVKFRAVVVVGNRDGYIGFGQGKDAQVGDAIKKAIVSAKINLVKVRRGCGSWECGCSNPHSIPMLVTGDAGSVRVTLRPAPQGIGLVTGDIGKK 161 HSP 2 Score: 32.3426 bits (72), Expect = 1.886e-30 Identity = 15/29 (51.72%), Postives = 20/29 (68.97%), Query Frame = 1 Query: 640 KKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 KKVL+ AGI DV ++G T+T N+ KA Sbjct: 160 KKVLELAGIRDVWAQTQGQTRTTINYAKA 188
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_METMJ (30S ribosomal protein S5P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rps5p PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.886e-30 Identity = 65/157 (41.40%), Postives = 99/157 (63.06%), Query Frame = 2 Query: 182 DKWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--MGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPRK 646 ++W+P+T LGR+V G+I ++++ PIKE QI+D L+ L+DEV+ I VQ+ T +G+R +F+ VVVG+ +G+VG G +V AI+ AI+ AKL++I V G W H++P VTGK GSV V + AP+G G+V +P+K Sbjct: 6 EEWIPLTGLGRMVAAGEITSIDEVLASGRPIKEPQIVDLLLPD-LEDEVLDINMVQRMTDSGRRVKFRTVVVVGNRNGYVGFGQGKDVQVGNAIQKAIVNAKLNLIKVSRGCGSWECGCETAHSIPIEVTGKAGSVKVTLKPAPQGIGLVTGDIPKK 161 HSP 2 Score: 32.7278 bits (73), Expect = 1.886e-30 Identity = 16/29 (55.17%), Postives = 19/29 (65.52%), Query Frame = 1 Query: 640 KKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 KKVL AGI DV +RG T+T N+ KA Sbjct: 160 KKVLMLAGIKDVWAFNRGQTRTTINYAKA 188
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_METM6 (30S ribosomal protein S5P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rps5p PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.449e-30 Identity = 68/156 (43.59%), Postives = 101/156 (64.74%), Query Frame = 2 Query: 182 DKWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRM--GYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPR 643 + W P T++GR+V+EG I + I LP+ E +I+D L+ L+++V+ + VQ+ ++G+R R++A VVVG+ +G+VG+G+ SKEV AIR AI AKLS+I VR+ G W G PH++P G CGSV V + APRG G+VA V + Sbjct: 18 EAWEPKTQIGRMVKEGTISDINYIMDKGLPLLEPEIVDALLPD-LEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAHAKLSLIKVRVGCGSWECGCGSPHSIPFTAKGACGSVKVELLPAPRGVGLVAGNVAK 172 HSP 2 Score: 28.1054 bits (61), Expect = 2.449e-30 Identity = 14/30 (46.67%), Postives = 18/30 (60.00%), Query Frame = 1 Query: 637 SKKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 +K VL AGI D T + G T+T NF +A Sbjct: 171 AKAVLGLAGIKDAWTKTFGDTRTTYNFAEA 200
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_PYRAB (30S ribosomal protein S5P OS=Pyrococcus abyssi GN=rps5p PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 3.187e-30 Identity = 67/160 (41.88%), Postives = 96/160 (60.00%), Query Frame = 2 Query: 182 DKWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTL---IGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--MGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPRK 646 D+W P TKLG LV+EG+I + +I+ IKE +IID L + + E++ I + T +G+R RF+ VG+ DG+VGLG+ +EV AIR AI AKL++I ++ G W + RPH+VP V GK GSV V++ PRG G+V V +K Sbjct: 14 DEWQPKTKLGMLVKEGQITDIHEIFRKGYQIKEPEIIDVLLPEVNARENQEILDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGIGHGREVGIAIRKAINYAKLNIIEIKRGCGSWECRCRRPHSVPFTVEGKEGSVRVKLIPGPRGLGLVIGDVGKK 173 HSP 2 Score: 33.113 bits (74), Expect = 3.187e-30 Identity = 15/29 (51.72%), Postives = 20/29 (68.97%), Query Frame = 1 Query: 640 KKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 KK+L+ AGI DV + + G T+T NF KA Sbjct: 172 KKILRLAGIQDVWSQTLGETRTTVNFAKA 200
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_METM7 (30S ribosomal protein S5P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rps5p PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.189e-30 Identity = 68/156 (43.59%), Postives = 101/156 (64.74%), Query Frame = 2 Query: 182 DKWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRM--GYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPR 643 + W P T++GR+V+EG I + I LP+ E +I+D L+ L+++V+ + VQ+ ++G+R R++A VVVG+ +G+VG+G+ SKEV AIR AI AKLS+I VR+ G W G PH++P G CGSV V + APRG G+VA V + Sbjct: 18 EAWEPKTQIGRMVKEGTISDINYIMDKGLPLLEPEIVDALLPD-LEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAHAKLSLIKVRIGCGSWECGCGYPHSIPFTAKGACGSVKVELLPAPRGVGLVAGNVAK 172 HSP 2 Score: 28.1054 bits (61), Expect = 3.189e-30 Identity = 14/30 (46.67%), Postives = 18/30 (60.00%), Query Frame = 1 Query: 637 SKKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 +K VL AGI D T + G T+T NF +A Sbjct: 171 AKAVLGLAGIKDAWTKTFGDTRTTYNFAEA 200
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_METMP (30S ribosomal protein S5P OS=Methanococcus maripaludis GN=rps5p PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 3.190e-30 Identity = 68/156 (43.59%), Postives = 101/156 (64.74%), Query Frame = 2 Query: 182 DKWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRM--GYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPR 643 + W P T++GR+V+EG I + I LP+ E +I+D L+ L+++V+ + VQ+ ++G+R R++A VVVG+ +G+VG+G+ SKEV AIR AI AKLS+I VR+ G W G PH++P G CGSV V + APRG G+VA V + Sbjct: 14 EAWEPKTQIGRMVKEGTISDISYIMDKGLPLLEPEIVDALLPD-LEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAHAKLSLIKVRVGCGSWECGCGSPHSIPFTAKGACGSVKVELLPAPRGVGLVAGNVAK 168 HSP 2 Score: 27.7202 bits (60), Expect = 3.190e-30 Identity = 13/30 (43.33%), Postives = 18/30 (60.00%), Query Frame = 1 Query: 637 SKKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 +K VL AG+ D T + G T+T NF +A Sbjct: 167 AKAVLGLAGVKDAWTKTFGDTRTTYNFAEA 196
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_METTH (30S ribosomal protein S5P OS=Methanobacterium thermoautotrophicum GN=rps5p PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 3.193e-30 Identity = 67/154 (43.51%), Postives = 97/154 (62.99%), Query Frame = 2 Query: 182 DKWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRMGY--WGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARV 637 ++W P T+LGRLV+EG I +++I+ PI E +IID L+ L++EV+ + VQ+ ++G++ F+ V VG+ DG+VGLG ++EV AIR A+ AK ++I VR G WG GR HTVP V+GK GSV V + AP G G+ V Sbjct: 8 EEWEPRTQLGRLVKEGVITSIDEIFEEGHPIMELEIIDALLPD-LEEEVIDVNLVQRMHKSGRKVNFRVIVAVGNKDGYVGLGQGKAREVGPAIRKAVDDAKFNIIKVRRGCGDWGCVCGREHTVPFKVSGKSGSVRVTLIPAPGGVGLAIGDV 160 HSP 2 Score: 33.113 bits (74), Expect = 3.193e-30 Identity = 14/29 (48.28%), Postives = 21/29 (72.41%), Query Frame = 1 Query: 640 KKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 K +++ AGIDDV + +RG T+T NF +A Sbjct: 162 KTIMRLAGIDDVWSHTRGQTQTTVNFARA 190
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_PYRHO (30S ribosomal protein S5P OS=Pyrococcus horikoshii GN=rps5p PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 4.150e-30 Identity = 68/160 (42.50%), Postives = 96/160 (60.00%), Query Frame = 2 Query: 182 DKWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTL---IGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--MGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPRK 646 D+W P TKLG LV+EG+I + +I+ IKE +IID L + + E++ I + T +G+R RF+ VG+ DG+VGLG+ +EV AIR AI AKL++I ++ G W + RPH+VP V GK GSV VR+ PRG G+V V +K Sbjct: 14 DEWQPRTKLGMLVKEGQITDIHEIFRRGYQIKEPEIIDVLLPEVNARENQEIIDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGIGHGREVGIAIRKAINYAKLNIIEIKRGCGSWECRCRRPHSVPFAVEGKEGSVRVRLIPGPRGLGLVIGDVGKK 173 HSP 2 Score: 32.7278 bits (73), Expect = 4.150e-30 Identity = 15/29 (51.72%), Postives = 20/29 (68.97%), Query Frame = 1 Query: 640 KKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 KK+L+ AGI DV + + G T+T NF KA Sbjct: 172 KKILRLAGIQDVWSQTFGETRTTVNFAKA 200 The following BLAST results are available for this feature:
BLAST of EY649897 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >EY649897 ID=EY649897; Name=EY649897; organism=Citrus sinensis; type=EST; length=940bpback to top |