EY649897
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_METS3 (30S ribosomal protein S5P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rps5p PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.052e-30 Identity = 67/154 (43.51%), Postives = 98/154 (63.64%), Query Frame = 2 Query: 182 DKWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRMGY--WGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARV 637 D+W P TK+G+LV+EG I +++I+ LPI E +I+D L+ L++EVM + VQ+ ++G++ F+ V VG+ +G+VGLG +KEV AIR A+ AK ++I VR G WG G+ HTVP V GK SV+V + AP G G+V V Sbjct: 6 DEWEPKTKMGKLVKEGTITDIDEIFEKGLPIMELEIVDALVPD-LEEEVMDVNLVQRMHKSGRKVNFRVIVAVGNKNGYVGLGQGKAKEVGPAIRKAVDNAKYNLIKVRRGCGDWGCVCGKEHTVPFKVQGKASSVSVSLMPAPAGVGLVVGDV 158 HSP 2 Score: 28.4906 bits (62), Expect = 7.052e-30 Identity = 14/29 (48.28%), Postives = 17/29 (58.62%), Query Frame = 1 Query: 640 KKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 K +L AGI DV + S G T+T NF A Sbjct: 160 KTILNLAGIKDVWSQSFGQTQTTVNFANA 188
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_UNCMA (30S ribosomal protein S5P OS=Uncultured methanogenic archaeon RC-I GN=rps5p PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 7.054e-30 Identity = 70/155 (45.16%), Postives = 96/155 (61.94%), Query Frame = 2 Query: 188 WVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--MGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPRK 646 W+P T+LG++V EGKI +E+ + LPIKEYQI+D L+ L DEV+ I VQ+ T +G+R +F+ VVVG+ +G+VGL +V AIR AI AKL++I V G W G HTVP V G+ GS+ V + APRG G+ A +K Sbjct: 12 WIPKTRLGKMVAEGKITTMEEAFETGLPIKEYQIVDALLPD-LVDEVLDISMVQRMTDSGRRVKFRTTVVVGNGNGYVGLAQGKGVQVGPAIRKAIENAKLNIIKVARGCGSWECGCGLTHTVPSQVEGRAGSLKVVLMPAPRGLGLAAGGPAKK 165 HSP 2 Score: 29.261 bits (64), Expect = 7.054e-30 Identity = 14/30 (46.67%), Postives = 19/30 (63.33%), Query Frame = 1 Query: 637 SKKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 +KKVL+ AG DV + + G T+T NF A Sbjct: 163 AKKVLEMAGYKDVWSRTEGETRTTINFALA 192
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_METM5 (30S ribosomal protein S5P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rps5p PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.554e-29 Identity = 67/156 (42.95%), Postives = 100/156 (64.10%), Query Frame = 2 Query: 182 DKWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRM--GYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPR 643 + W P T++GR+V+EG I + I LP+ E +I+D L+ L+++V+ + VQ+ ++G+R R++A V VG+ +G+VG+G+ SKEV AIR AI AKLS+I VR+ G W G PH++P G CGSV V + APRG G+VA V + Sbjct: 18 EAWEPKTQIGRMVKEGTISDISYIMDKGLPLLEPEIVDALLPD-LEEQVLDVKLVQRMHKSGRRARYRATVAVGNKNGYVGVGMGKSKEVGPAIRKAIAHAKLSLIKVRVGCGSWECGCGSPHSIPFAAKGACGSVKVELLPAPRGVGLVAGNVAK 172 HSP 2 Score: 27.7202 bits (60), Expect = 1.554e-29 Identity = 13/30 (43.33%), Postives = 18/30 (60.00%), Query Frame = 1 Query: 637 SKKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 +K VL AG+ D T + G T+T NF +A Sbjct: 171 AKAVLGLAGVKDAWTKTFGDTRTTFNFAEA 200
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_SULAC (30S ribosomal protein S5P OS=Sulfolobus acidocaldarius GN=rps5p PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.795e-29 Identity = 63/154 (40.91%), Postives = 101/154 (65.58%), Query Frame = 2 Query: 182 DKWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--MGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARV 637 + W P TK+G+L++EGKI +++++ +LPI E +I+D L+ KL+ +++ I VQKQT AG+ +R+K +V+G+ DG++ G +K++ AI+ AI AK+ +IPVR G W G H++P V+GK GSV V + AP+G G+V V Sbjct: 11 EDWKPRTKVGQLIKEGKINSMKELFERNLPIVEPEIVDVLLP-KLRYDIVDIGIVQKQTDAGELSRYKVLIVMGNMDGYISYGTGKAKQLRVAIQKAIRDAKMRIIPVRRGCGSWECTCGESHSLPFIVSGKAGSVEVTLLPAPKGTGLVVGSV 163 HSP 2 Score: 29.6462 bits (65), Expect = 1.795e-29 Identity = 14/29 (48.28%), Postives = 19/29 (65.52%), Query Frame = 1 Query: 640 KKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 K L AG+ DV + ++GST T NF+KA Sbjct: 165 KTFLSLAGLKDVWSRTKGSTYTHENFIKA 193 HSP 3 Score: 21.557 bits (44), Expect = 1.795e-29 Identity = 8/22 (36.36%), Postives = 12/22 (54.55%), Query Frame = 3 Query: 720 QGTFECLVKTYAFLTPDFWRRL 785 + + L TY F+TP W R+ Sbjct: 192 KAAYIALYNTYRFVTPVDWGRM 213
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_PYRKO (30S ribosomal protein S5P OS=Pyrococcus kodakaraensis GN=rps5p PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.022e-29 Identity = 65/160 (40.62%), Postives = 97/160 (60.62%), Query Frame = 2 Query: 182 DKWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGH---KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--MGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPRK 646 ++W P TKLGRLV+EG+I + +I+ IKE +I+D L+ + EV+ I + T +G+R RF+ VG+ DG+VGLG+ +EV AIR AI AK+++I ++ G W + RPH++P V GK GSV V++ PRG G+V V +K Sbjct: 13 EEWEPKTKLGRLVKEGQITDIHEIFRKGYQIKEPEIVDVLLPEVNLRENQEVLDIALTVRMTDSGRRIRFRVLAAVGNRDGYVGLGIGHGREVGIAIRKAINYAKMNIIEIKRGCGSWECRCRRPHSIPFAVEGKEGSVRVKLMPGPRGLGLVIGDVGKK 172 HSP 2 Score: 31.9574 bits (71), Expect = 2.022e-29 Identity = 14/29 (48.28%), Postives = 19/29 (65.52%), Query Frame = 1 Query: 640 KKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 KK+L AG+ DV + + G T+T NF KA Sbjct: 171 KKILTLAGVQDVWSQTLGETRTTVNFAKA 199
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_METJA (30S ribosomal protein S5P OS=Methanocaldococcus jannaschii GN=rps5p PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.638e-29 Identity = 65/156 (41.67%), Postives = 102/156 (65.38%), Query Frame = 2 Query: 182 DKWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--MGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPR 643 D+W P T +GR+V+EG+I ++ I ++LPI E +I+D L+ L+++V+ + VQ+ ++G+R RF+A VVVG+ +G+VG+G +KEV AIR AI AK ++I V+ G W G PH++P GKCGS + + AP+G G+VA V + Sbjct: 6 DEWEPKTTIGRMVKEGQITDIDYILDNNLPILEPEIVDALLPD-LEEKVLDVKLVQRMHKSGRRARFRATVVVGNRNGYVGVGKGKAKEVGPAIRKAIAQAKKNIIRVKRGCGSWECGCGTPHSIPYKGYGKCGSTAIEILPAPKGVGLVAGDVAK 160 HSP 2 Score: 28.8758 bits (63), Expect = 2.638e-29 Identity = 15/30 (50.00%), Postives = 18/30 (60.00%), Query Frame = 1 Query: 637 SKKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 +K VL AGI DV T + G T+T NF A Sbjct: 159 AKAVLGLAGIKDVWTKTFGETRTTYNFAMA 188
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_HALMA (30S ribosomal protein S5P OS=Haloarcula marismortui GN=rps5p PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.476e-29 Identity = 63/155 (40.65%), Postives = 90/155 (58.06%), Query Frame = 2 Query: 188 WVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--MGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPRK 646 W P T+LG+ V EG+I +++ LP+KE +++D L+ L+DEV+ I VQ+ T +G+R +F+ V VG+ DG +G +V AI+ AI +AKL++I V G W GRPHTV GK GSV V + APRG G+ RK Sbjct: 7 WEPRTRLGKQVVEGEIDSMQEALNSGLPLKESEVVDQLVPD-LEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGLIGYAEGRDDQVGGAIQKAIDIAKLNIIDVSRGCGSWECGCGRPHTVALRTEGKAGSVEVELQPAPRGLGLAGGETVRK 160 HSP 2 Score: 37.7354 bits (86), Expect = 4.476e-29 Identity = 18/34 (52.94%), Postives = 24/34 (70.59%), Query Frame = 1 Query: 625 GG*GSKKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 GG +KVL+ AGI+D+ T S G+T+T NF KA Sbjct: 154 GGETVRKVLELAGIEDIWTRSSGNTRTTVNFAKA 187
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_METLZ (30S ribosomal protein S5P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rps5p PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 4.479e-29 Identity = 66/155 (42.58%), Postives = 94/155 (60.65%), Query Frame = 2 Query: 188 WVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--MGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPRK 646 WVPVT LG+ V G+ ++I PIKE I+D ++ L DEV+ I +Q+ T +G+R +F+A VV+G+ +G+VG G +V TAI+ AI AKL+++ VR G W G H+VP VTGK GSV V + AP+G G+V V +K Sbjct: 8 WVPVTGLGKKVMAGEFASFDEILASGQPIKEAGIVDAMLPD-LVDEVLCIDMMQRMTDSGRRIKFRAVVVIGNKNGYVGFGQGRDVQVGTAIKKAITNAKLNIVKVRRGCGSWECGCGMKHSVPMEVTGKAGSVAVTLKPAPKGIGLVTGDVGKK 161 HSP 2 Score: 33.113 bits (74), Expect = 4.479e-29 Identity = 16/29 (55.17%), Postives = 20/29 (68.97%), Query Frame = 1 Query: 640 KKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 KKVL AGI DV ++ G+T+T NF KA Sbjct: 160 KKVLTLAGIQDVWVNTSGNTRTTLNFAKA 188
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_PICTO (30S ribosomal protein S5P OS=Picrophilus torridus GN=rps5p PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 9.868e-29 Identity = 67/154 (43.51%), Postives = 97/154 (62.99%), Query Frame = 2 Query: 182 DKWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--MGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARV 637 ++W P T+LGRLV G+I+ + + LP+KEYQI+D LI LKDEV+ I Q+ T +G+R + VVG+ +G+VG+G +KE A AI+ AI AKL++I ++ G W G+PHT+P V GK GSV+V + AP+G G+ V Sbjct: 3 EEWTPRTELGRLVANGEIKTISEALHSKLPLKEYQIVDYLIPD-LKDEVINIERAQRMTDSGRRMNYSITAVVGNGNGYVGVGRGKAKEAAPAIKKAIDNAKLNIIEIKRGCGSWECGCGKPHTLPFLVNGKSGSVSVTLKPAPQGVGLAVGDV 155 HSP 2 Score: 26.5646 bits (57), Expect = 9.868e-29 Identity = 13/29 (44.83%), Postives = 17/29 (58.62%), Query Frame = 1 Query: 640 KKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 K +L+ AGIDD + G TKT N+ A Sbjct: 157 KVILRMAGIDDAWGFAAGHTKTTVNYALA 185
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_HALSA (30S ribosomal protein S5P OS=Halobacterium salinarium GN=rps5p PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 9.879e-29 Identity = 63/149 (42.28%), Postives = 90/149 (60.40%), Query Frame = 2 Query: 182 DKWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--MGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGI 622 D W P T+LG LV++G++ + + LP+KE +I+D L+ L DEV+ I VQ+ T +G+R +F+ V +G+ DG+VG +V AI+ AI +AKL++I V G W GRPHTV TGK GSV V + APRG G+ Sbjct: 5 DTWQPKTRLGGLVQDGEVEDMSEALDTGLPLKEPEIVDQLLPG-LDDEVLDINMVQRMTDSGRRVKFRCVVAIGNRDGYVGYAEGRDDQVGGAIQKAIEVAKLNIIDVSRGCGSWECGCGRPHTVALKSTGKAGSVDVELMPAPRGLGL 152 HSP 2 Score: 36.5798 bits (83), Expect = 9.879e-29 Identity = 19/34 (55.88%), Postives = 22/34 (64.71%), Query Frame = 1 Query: 625 GG*GSKKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 GG + VL+ AGIDDV T S G T+T NF KA Sbjct: 154 GGETVQHVLELAGIDDVWTRSSGKTRTTVNFAKA 187 The following BLAST results are available for this feature:
BLAST of EY649897 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY649897 ID=EY649897; Name=EY649897; organism=Citrus sinensis; type=EST; length=940bpback to top |